Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013816.1 Kokia drynarioides strain JFW-HI SEQ_128844, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  164580

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--34
6
5.0
6
91
0
51
13
0
70
16
1.18
2670--2711
21
2.0
21
100
0
84
66
14
14
4
1.40
17321--17386
30
2.2
30
83
2
80
50
6
9
34
1.59
33244--33284
12
3.4
12
86
0
55
48
12
2
36
1.54
36235--36267
2
16.5
2
100
0
66
48
0
0
51
1.00
37414--37532
59
2.0
59
98
0
229
25
31
11
31
1.91
49123--49151
13
2.1
14
93
6
51
27
0
0
72
0.85
49579--49608
3
10.0
3
100
0
60
33
0
0
66
0.92
50034--50063
7
4.3
7
91
0
51
43
0
0
56
0.99
55638--55673
17
2.1
18
89
5
56
41
0
0
58
0.98
62202--62322
41
2.9
41
86
3
154
39
17
19
23
1.92
62609--62731
31
4.0
29
74
13
88
41
9
11
37
1.74
62614--62702
29
3.0
29
79
11
99
40
10
12
37
1.77
62661--62726
29
2.3
27
78
14
69
39
12
10
37
1.77
64033--64124
41
2.2
40
80
3
94
45
16
21
16
1.85
64109--64148
19
2.1
19
95
0
71
47
12
25
15
1.80
64069--64187
60
2.0
59
91
1
193
42
15
26
15
1.87
64128--64205
41
1.9
41
89
5
122
39
14
29
16
1.88
65084--65164
42
1.9
43
89
2
128
28
16
25
29
1.96
65202--65318
43
2.7
42
84
7
146
26
19
23
29
1.98
67186--67258
10
7.2
10
72
20
62
38
0
2
58
1.12
67716--67790
29
2.4
32
82
12
95
56
2
0
41
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72914--72956
4
10.8
4
94
0
77
25
2
23
48
1.62
75295--75324
15
2.0
15
100
0
60
26
0
0
73
0.84
78979--79014
17
2.1
17
89
0
54
11
2
2
83
0.86
78979--79025
16
2.9
16
83
3
58
8
6
2
82
0.90
79183--79225
22
2.0
22
90
4
70
74
4
18
2
1.10
98957--98990
17
2.0
17
88
0
50
17
0
14
67
1.23
101424--101473
25
2.0
25
96
0
91
42
8
6
44
1.58
103771--103805
10
3.6
10
88
3
54
68
0
2
28
1.04
103993--104045
17
3.1
17
77
20
56
62
1
1
33
1.17
103992--104045
18
3.1
17
75
17
56
62
1
1
33
1.16
104644--104708
17
3.4
18
74
18
53
35
1
3
60
1.22
124492--124533
2
21.5
2
95
4
77
50
0
50
0
1.00
131464--131526
22
2.9
22
71
15
60
53
0
0
46
1.00
137686--137771
35
2.5
35
83
7
113
68
6
2
22
1.25
138761--138827
20
3.4
20
80
10
66
59
2
1
35
1.22
139075--139170
39
2.5
38
77
12
108
27
5
3
64
1.30
153784--153828
19
2.3
20
77
11
58
37
0
4
57
1.19
154201--154234
14
2.3
15
85
10
52
35
0
0
64
0.94
154308--154351
16
2.5
19
72
20
51
65
0
0
34
0.93
154526--154589
33
2.0
32
90
3
101
25
1
14
59
1.44
157456--157502
19
2.4
19
82
13
51
61
2
2
34
1.20
161093--161161
27
2.5
27
88
6
95
42
17
28
11
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
164147--164229
28
3.0
26
81
13
96
22
9
22
44
1.82
164463--164504
21
2.0
21
95
4
77
26
11
38
23
1.90

Tables:   1

The End!