Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013841.1 Kokia drynarioides strain JFW-HI SEQ_128869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108778

Tables:   1   

This is table  1  of  1  ( 62 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2700--2734
2
17.5
2
100
0
70
0
51
0
48
1.00
10684--10850
58
2.9
57
79
5
165
23
14
12
48
1.79
11009--11122
58
1.9
59
87
7
167
48
9
18
23
1.77
11551--11609
22
2.8
21
76
7
66
57
3
0
38
1.15
12887--13088
96
2.1
96
99
0
395
35
13
27
23
1.92
24067--24118
18
2.8
19
71
11
54
48
7
21
23
1.75
25802--25869
19
3.5
20
77
15
70
64
7
10
17
1.46
25802--25890
39
2.3
39
86
5
117
60
7
12
19
1.55
25816--25891
20
3.8
20
75
12
66
57
6
14
21
1.59
25802--25911
38
2.8
39
83
8
118
58
8
12
20
1.60
25816--25926
39
2.8
38
82
6
125
53
8
15
23
1.68
29641--29679
21
1.9
21
89
5
62
25
17
15
41
1.89
34628--34663
18
2.0
18
100
0
72
33
22
5
38
1.77
34750--34830
26
3.2
25
68
7
65
40
14
23
20
1.90
34764--34843
24
3.2
24
77
6
97
35
15
28
21
1.93
34751--34871
50
2.4
50
87
0
188
39
16
22
21
1.92
34764--34854
24
3.7
24
76
11
94
36
15
28
19
1.92
41523--41574
26
2.0
25
85
11
68
59
5
0
34
1.21
43613--43656
22
2.0
23
82
13
56
68
6
4
20
1.31
44211--44305
46
2.1
46
86
4
129
45
21
11
22
1.83
44300--44415
52
2.2
52
82
0
133
45
16
15
22
1.84
44337--44402
6
11.3
6
70
6
55
43
16
16
22
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44336--44401
23
2.9
23
86
0
78
45
16
16
21
1.85
44308--44415
29
3.9
29
81
14
138
45
16
15
22
1.85
44359--44415
23
2.5
23
94
5
98
45
17
15
21
1.85
44385--44646
130
2.0
130
99
0
515
26
30
16
27
1.96
44628--44738
40
2.8
40
83
2
143
25
18
18
37
1.93
45404--45515
42
2.6
43
87
4
156
31
39
13
16
1.87
47192--47240
22
2.2
22
78
7
55
57
6
2
34
1.35
51266--51406
68
2.1
68
97
0
264
43
5
17
33
1.72
57849--57882
11
3.0
11
87
8
50
23
0
29
47
1.52
58306--58846
114
4.7
114
87
0
733
23
25
16
33
1.96
58769--58964
96
2.0
96
85
1
259
22
25
17
34
1.95
59260--59547
147
2.0
147
83
1
371
17
29
17
35
1.93
59254--59550
49
6.1
49
74
4
267
19
28
17
35
1.94
60466--60533
18
3.5
19
80
9
59
0
22
0
77
0.76
60462--60514
15
3.5
16
82
10
58
0
20
0
79
0.74
60489--60543
21
2.6
21
85
5
76
1
14
0
83
0.73
60477--60522
13
3.3
15
79
17
62
0
17
0
82
0.67
60480--60543
29
2.2
28
83
8
76
1
15
0
82
0.74
60480--60540
19
3.2
18
84
9
70
1
16
0
81
0.76
61356--61410
21
2.5
22
80
16
60
0
12
5
81
0.84
69237--69281
23
2.0
22
87
8
65
62
0
20
17
1.33
71026--71238
105
2.0
105
96
0
390
29
18
18
34
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72290--72370
30
2.7
30
81
7
101
40
28
9
20
1.85
75260--75313
21
2.6
20
77
11
56
27
29
9
33
1.88
78397--78485
27
3.3
27
96
1
160
21
19
26
32
1.97
80317--80509
50
3.8
50
80
4
210
31
16
23
29
1.96
89436--89507
29
2.4
29
86
8
110
9
15
23
51
1.73
97897--98028
65
2.0
65
97
0
246
39
5
18
36
1.74
101077--101130
20
2.7
20
91
0
90
31
35
7
25
1.84
101316--101371
20
2.8
20
86
0
76
35
30
7
26
1.83
102708--102817
50
2.2
50
83
0
130
37
15
19
28
1.92
104097--104171
23
3.3
23
88
3
107
38
30
18
12
1.87
104088--104206
46
2.6
46
77
10
136
42
25
19
13
1.87
104088--104201
23
5.0
22
76
10
86
41
26
20
12
1.87
104276--104323
24
1.9
26
84
16
66
31
22
0
45
1.53
106357--106466
50
2.2
50
83
0
130
37
15
19
28
1.92
107746--107820
23
3.3
23
88
3
107
38
30
18
12
1.87
107737--107855
46
2.6
46
77
10
136
42
25
19
13
1.87
107737--107850
23
5.0
22
76
10
86
41
26
20
12
1.87
107925--107972
24
1.9
26
84
16
66
31
22
0
45
1.53

Tables:   1

The End!