Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013861.1 Kokia drynarioides strain JFW-HI SEQ_128889, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56021

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3477--3667
96
2.0
95
83
7
244
38
13
17
30
1.89
3936--4273
29
11.7
29
76
10
239
34
2
25
38
1.68
4022--4273
58
4.3
58
88
6
291
33
1
25
39
1.66
4051--4365
87
3.6
83
77
11
294
33
3
25
38
1.72
5445--5551
3
35.0
3
77
9
92
37
2
0
59
1.12
5465--5499
13
2.7
13
83
16
54
42
0
0
57
0.99
5991--6016
13
2.0
13
100
0
52
15
0
46
38
1.46
6225--6318
17
5.5
17
88
0
116
55
7
2
35
1.40
12512--12546
12
2.8
12
86
4
52
31
0
0
68
0.90
28111--28412
43
7.0
43
85
3
403
28
17
26
27
1.97
29127--29160
18
1.9
18
94
5
61
52
0
0
47
1.00
38311--38391
31
2.6
30
83
9
92
45
14
9
29
1.77
40646--40674
11
2.6
11
100
0
58
17
27
27
27
1.97
43990--44054
30
2.1
31
86
8
89
29
9
16
44
1.79
47507--47865
30
12.3
29
77
12
269
36
3
25
35
1.72
47507--47865
59
6.2
57
77
11
268
36
3
25
35
1.72
47539--47884
88
3.9
88
81
8
348
36
3
24
35
1.73
49896--49960
17
3.8
17
85
4
85
56
1
0
41
1.08
49875--49962
35
2.5
36
85
5
110
55
2
2
39
1.25
49899--49962
18
3.6
17
79
12
67
59
1
0
39
1.07
50322--50368
22
2.2
22
88
3
69
76
2
6
14
1.08
52728--52791
4
15.8
4
75
15
60
78
1
3
17
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52732--52796
29
2.2
30
83
2
78
78
1
3
16
0.96
52726--52793
8
8.4
8
80
9
75
79
1
2
16
0.93
53974--54017
21
2.1
21
91
0
70
29
13
13
43
1.83
53978--54024
21
2.2
21
84
0
58
34
12
17
36
1.87

Tables:   1

The End!