Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013867.1 Kokia drynarioides strain JFW-HI SEQ_128895, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111038

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
949--981
12
2.7
13
86
13
52
9
6
12
72
1.26
953--982
11
2.6
12
89
10
53
6
6
13
73
1.24
1600--1639
21
1.9
21
84
0
53
32
7
7
52
1.58
1910--2199
144
2.0
144
95
1
519
45
7
8
38
1.63
10151--10193
20
2.2
19
87
4
59
37
0
16
46
1.47
10156--10212
26
2.2
26
81
6
62
36
0
17
45
1.49
13367--13396
13
2.4
12
94
5
51
20
0
10
70
1.16
22448--22479
5
6.8
5
96
3
50
87
0
12
0
0.54
22426--22486
10
6.0
10
75
9
52
81
3
11
3
0.92
22429--22486
13
4.1
14
76
17
57
81
3
12
3
0.95
26292--26320
6
4.8
6
100
0
58
82
0
0
17
0.66
29047--29086
19
2.1
19
100
0
80
10
10
15
65
1.48
33446--33472
2
13.5
2
100
0
54
0
48
0
51
1.00
38835--38875
17
2.4
17
87
0
55
43
14
9
31
1.78
46684--46727
17
2.9
15
81
15
54
38
0
2
59
1.10
46823--46879
28
2.1
28
86
3
80
52
0
7
40
1.28
48449--49363
201
4.6
201
90
1
1433
33
11
19
35
1.88
48445--49363
401
2.3
401
92
1
1509
32
11
19
35
1.88
50833--50883
24
2.2
24
82
6
61
62
0
0
37
0.95
56777--56802
12
2.2
12
100
0
52
34
15
0
50
1.45
57208--57300
45
2.1
45
95
0
168
43
4
29
23
1.73
62445--62485
21
2.0
21
90
0
64
4
9
31
53
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63937--63980
12
3.9
12
80
19
51
52
0
0
47
1.00
63947--63988
21
2.0
22
81
13
52
47
0
2
50
1.14
64939--64988
26
2.0
26
92
7
86
62
4
0
34
1.14
66882--66949
35
1.9
35
90
0
109
35
20
23
20
1.96
73852--73881
2
15.0
2
100
0
60
50
0
0
50
1.00
74691--75188
189
2.6
188
84
4
666
35
13
18
32
1.90
77652--77723
36
2.0
36
86
8
101
30
26
0
43
1.55
87788--87833
20
2.2
21
84
3
58
34
4
2
58
1.30
92112--92185
31
2.4
31
78
15
91
24
1
8
66
1.27
96848--96926
31
2.6
30
89
4
122
25
15
11
48
1.78
97133--97232
32
3.3
31
68
11
89
53
8
11
28
1.64
100830--100910
40
2.0
40
100
0
162
53
9
12
24
1.69
103013--103081
30
2.2
32
79
5
79
28
17
15
37
1.91
107532--107566
18
2.0
17
88
5
52
20
37
11
31
1.88

Tables:   1

The End!