Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013871.1 Kokia drynarioides strain JFW-HI SEQ_128899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33744

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
410--686
29
9.4
30
75
10
171
34
32
5
28
1.79
410--790
59
6.5
59
82
6
364
33
30
5
30
1.80
441--777
29
11.4
30
72
11
180
33
30
5
30
1.80
410--786
30
12.7
30
74
12
264
33
30
5
31
1.80
821--885
29
2.2
29
89
8
96
32
27
12
27
1.92
821--895
30
2.6
29
87
6
98
29
26
12
32
1.92
1101--1292
96
2.0
96
84
8
248
29
22
13
34
1.92
1827--1869
22
2.0
22
90
0
68
44
25
20
9
1.81
5086--5136
22
2.3
23
86
10
70
50
0
5
43
1.26
6041--6102
31
2.0
31
96
0
115
32
11
12
43
1.79
11489--11557
10
7.2
10
73
12
56
36
0
2
60
1.11
11499--11595
37
2.6
38
82
10
105
37
0
3
59
1.13
11488--11605
45
2.5
46
78
14
116
36
0
2
60
1.16
12763--12819
20
2.8
21
82
10
64
28
3
5
63
1.33
12770--12819
22
2.3
23
82
6
68
28
2
4
66
1.21
16907--17061
41
3.7
41
93
3
240
35
10
26
27
1.90
16910--17085
41
4.3
38
84
11
165
36
10
25
27
1.89
16909--17085
82
2.1
81
83
7
205
36
10
25
27
1.89
21406--21450
6
7.5
6
89
0
63
22
31
0
46
1.52
24967--25036
33
2.3
31
83
11
83
57
10
4
28
1.50
25470--25599
66
2.0
66
90
0
206
36
16
21
25
1.94
26709--26822
40
2.8
39
80
5
129
39
18
21
20
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26792--26905
42
2.7
42
80
0
129
42
15
24
17
1.88
28669--28784
43
2.7
43
87
0
160
34
18
23
23
1.96
28783--28815
17
1.9
17
93
0
57
9
6
30
54
1.56
28810--28941
43
3.1
43
80
3
124
27
15
25
31
1.95

Tables:   1

The End!