Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013874.1 Kokia drynarioides strain JFW-HI SEQ_128902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  118578

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1434--1465
6
5.3
6
100
0
64
18
15
15
50
1.79
6225--6259
6
5.8
6
89
0
52
20
11
14
54
1.70
7848--7886
19
2.1
19
85
0
51
48
5
0
46
1.24
14943--14989
24
2.0
24
86
0
67
59
4
2
34
1.29
31351--31404
21
2.6
21
82
5
65
33
27
14
24
1.94
31559--31598
21
1.9
21
84
0
53
35
12
17
35
1.88
54093--54138
21
2.2
21
84
0
56
39
23
6
30
1.80
56215--56245
16
1.9
16
93
0
53
22
29
0
48
1.51
61549--61667
43
2.8
43
80
0
130
22
16
21
39
1.92
64273--64409
53
2.6
53
91
0
220
27
16
24
32
1.96
65088--65140
21
2.6
19
80
16
61
28
11
26
33
1.91
78167--78204
20
2.0
20
89
5
60
68
7
7
15
1.37
84930--84976
17
2.8
17
80
0
58
46
12
19
21
1.82
89523--89819
118
2.5
117
82
3
353
25
17
24
31
1.97
89607--89848
118
2.1
118
82
3
290
25
19
25
29
1.98
91331--91388
23
2.5
23
85
0
71
32
24
20
22
1.98
97929--97983
23
2.4
23
84
0
74
30
27
20
21
1.98
99626--99899
43
6.4
42
74
8
144
22
14
22
40
1.90
108209--108536
118
2.8
117
82
3
381
26
18
24
30
1.98
108733--108861
42
3.1
42
94
0
213
37
6
24
31
1.82
111017--111064
22
2.2
22
85
7
62
45
4
10
39
1.58
111891--111938
20
2.4
20
79
10
62
29
25
10
35
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114243--114305
33
1.9
32
90
3
99
36
4
22
36
1.75
114469--114508
20
2.0
20
90
0
62
30
42
2
25
1.68
114694--114749
20
2.8
20
75
0
58
35
26
5
32
1.79
116182--116223
17
2.3
19
80
12
52
47
2
33
16
1.60
116190--116224
17
2.0
18
88
5
54
42
2
37
17
1.64
117473--117526
20
2.7
20
94
0
81
31
37
5
25
1.79

Tables:   1

The End!