Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013885.1 Kokia drynarioides strain JFW-HI SEQ_128913, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75717

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8195--8538
160
2.1
162
85
5
469
36
20
21
20
1.95
8363--8835
205
2.3
204
88
2
690
36
19
22
22
1.95
8728--8873
37
3.6
37
72
19
130
34
17
21
25
1.96
8728--8922
86
2.3
86
92
0
327
35
17
22
25
1.95
9451--9538
6
15.2
6
68
19
53
44
1
3
51
1.25
9451--9531
34
2.4
34
89
0
126
43
1
3
51
1.27
9497--9545
24
2.0
25
84
11
66
44
0
4
51
1.20
9451--9531
17
4.8
17
82
0
108
43
1
3
51
1.27
11293--11802
30
17.3
29
72
12
348
32
30
3
32
1.75
11274--11802
29
18.0
30
75
10
423
33
30
3
32
1.76
11274--11796
59
8.9
59
81
6
542
33
29
4
32
1.76
11783--11830
21
2.3
20
85
3
60
35
27
0
37
1.57
13642--13682
16
2.6
16
82
14
50
31
0
0
68
0.90
15374--15480
42
2.6
42
75
1
99
32
17
17
31
1.94
19645--19693
22
2.2
22
88
0
71
57
0
6
36
1.24
26228--26267
10
3.9
10
81
18
55
70
0
0
30
0.88
26230--26268
21
1.9
20
89
5
60
71
0
0
28
0.86
26506--26543
11
3.5
11
85
7
51
36
2
2
57
1.26
26506--26552
21
2.2
21
84
0
58
38
4
2
55
1.31
28437--28607
87
2.0
87
97
0
324
35
10
5
48
1.62
28436--28571
30
4.7
29
68
21
104
33
11
6
48
1.65
28975--29016
16
2.5
17
84
3
59
73
2
0
23
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39950--40008
28
2.1
28
81
12
68
25
8
0
66
1.20
43504--43939
145
3.0
145
94
0
782
25
14
19
40
1.90
51719--51764
12
3.8
12
77
5
56
15
15
39
30
1.88
51815--51894
23
3.5
23
89
0
106
32
20
17
30
1.95
51969--52008
21
1.9
21
85
10
55
32
0
22
45
1.53
66014--66052
18
2.2
17
90
4
60
43
5
7
43
1.55
66684--66730
19
2.3
20
79
13
53
55
2
0
42
1.12
67503--67555
27
1.9
28
84
3
72
32
5
5
56
1.46
67855--67907
24
2.2
24
86
10
72
43
3
1
50
1.30
71670--71711
17
2.5
17
96
0
75
21
11
23
42
1.86
72281--72462
96
1.9
96
84
6
244
38
13
18
30
1.88
72676--72736
28
2.1
29
79
11
72
26
9
26
37
1.87
72723--72892
30
5.8
30
73
11
129
31
3
28
35
1.74
72723--72883
58
2.7
58
77
6
164
32
3
28
35
1.75
72723--72891
29
5.7
30
75
11
118
31
3
28
35
1.75
74864--74896
6
5.7
6
85
7
50
51
0
3
45
1.16
74865--74910
17
2.7
17
90
6
67
54
0
4
41
1.20
74864--74910
23
2.0
23
84
8
60
53
0
4
42
1.20

Tables:   1

The End!