Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01013891.1 Kokia drynarioides strain JFW-HI SEQ_128919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 43929
ACGTcount: A:0.31, C:0.18, G:0.16, T:0.36
Found at i:166 original size:33 final size:34
Alignment explanation
Indices: 102--166 Score: 87
Period size: 33 Copynumber: 1.9 Consensus size: 34
92 ACTTTATTAA
* * *
102 ATGTAGATCACATAATGTATGTCATATTTAAAAG
1 ATGTAGATCACATAATGCATGACATAATTAAAAG
*
136 ATGTAGATTA-ATAATGCATGACATAATTAAA
1 ATGTAGATCACATAATGCATGACATAATTAAA
167 TCACAATCTT
Statistics
Matches: 27, Mismatches: 4, Indels: 1
0.84 0.12 0.03
Matches are distributed among these distances:
33 18 0.67
34 9 0.33
ACGTcount: A:0.45, C:0.08, G:0.14, T:0.34
Consensus pattern (34 bp):
ATGTAGATCACATAATGCATGACATAATTAAAAG
Found at i:293 original size:17 final size:17
Alignment explanation
Indices: 262--294 Score: 50
Period size: 17 Copynumber: 1.9 Consensus size: 17
252 CAAACACTTA
262 TTAAACTAAAATAAAAC
1 TTAAACTAAAATAAAAC
279 TTAAA-TAAAATTAAAA
1 TTAAACTAAAA-TAAAA
295 AATCCTTAAA
Statistics
Matches: 15, Mismatches: 0, Indels: 2
0.88 0.00 0.12
Matches are distributed among these distances:
16 5 0.33
17 10 0.67
ACGTcount: A:0.67, C:0.06, G:0.00, T:0.27
Consensus pattern (17 bp):
TTAAACTAAAATAAAAC
Found at i:914 original size:214 final size:213
Alignment explanation
Indices: 443--1469 Score: 1120
Period size: 213 Copynumber: 4.9 Consensus size: 213
433 TACTTTAGTA
* * * ** * *
443 CCTTAAAGCATTCAAGACGATCCATTGCTTCGAGCAATTTTCCGAACATTCCATGCTCGAGAAAT
1 CCTTAAAGTATTCAAGATGATCCATTCCTTTAAGCAATTTT-CAAACATTCCATGCTCGGGAAAT
* * * * *
508 CGCATCATTTGGTCTAAATAGTTTTTCATTTTGTTATCAACTTTTGGTCTTTGAATTAAAAAACT
65 TGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATT-AAAAACT
* * *
573 TATTTACGTGAGAACTGTTTCACTCTTAGTTCTTGGATGAACTTCTGAACTTGTCAAACATTTT-
129 TATTTACGTGAGAATTGTTT--CTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAAC-TTTTA
* * *
637 CGAGTTCTTTTAAAAATTAGGTT
191 CGAGTTCTTTTATAACTTCGGTT
* * * * *
660 CCTCAAAGTATTCTAGATGATCCATTCCCTTAATCAAATTTTCAAATATTCCATGCTCGGGAAAT
1 CCTTAAAGTATTCAAGATGATCCATTCCTTTAAGC-AATTTTCAAACATTCCATGCTCGGGAAAT
* * * *
725 TGCACCATTTGGTCTAAATAGTTTTTCATTTTGTAAACAAGATTTGGTCTCTGAATTAAAAACTT
65 TGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTT
* *
790 ATTTACGTGAGAATTGTTTCTCTTAGTTCTTGGACGAACTTCCGAACTTGTCAAACTTTTACGAG
130 ATTTACGTGAGAATTGTTTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACGAG
* *
855 CTCTTTTATAACTTTGGTT
195 TTCTTTTATAACTTCGGTT
* * * * * *
874 CCTTAGAGTATTCAAGATGACCCATTCCTTTAAGCAAATTTTCGAACAATCCATGCTCTGCAAAT
1 CCTTAAAGTATTCAAGATGATCCATTCCTTTAAGC-AATTTTCAAACATTCCATGCTCGGGAAAT
* * * *
939 TGCATCATTTAGTCTACATAGTTCGTCATTTTGTAAACAA-TGTTTAGTCTTTGAATTAAAAACT
65 TGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGT-TTTGGTCTTTGAATTAAAAACT
* * *
1003 TATTTACGTAAGAATTG-CTCTCTTGGTTCTTGGATGAACTTCCGGACTTGTCAAACTTTTACGA
129 TATTTACGTGAGAATTGTTTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACGA
*
1067 GTTTTTTTATAACTTCGGTT
194 GTTCTTTTATAACTTCGGTT
* *
1087 CCTTAAAGAATTCAAGATGATCCATT-CTTTCAAGCAATTTTCCAAACATTCCATGCTCAGGAAA
1 CCTTAAAGTATTCAAGATGATCCATTCCTTT-AAGCAATTTT-CAAACATTCCATGCTCGGGAAA
* * * * *
1151 TCGCAT-AGTTTAGTCTAAATAGTTTGTCATTTTGTTATCAACTTTTGGTCTTTGAATTAAAAAC
64 TTGCATCA-TTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAAC
*
1215 TTATTTACGTGAGAATTGTTTCTCTCTTGGTTCTT-G--G-A----CGAACATGTCAAACTTTTA
128 TTATTTACGTGAGAATTG-TT-TCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTA
*
1272 C-AGTTCTTTTATAACTTCGATT
191 CGAGTTCTTTTATAACTTCGGTT
* * * * *
1294 TCATAAAGTATTCAAGAAGATCCATTCCTTCAAGCAATTTT----C--T-CA------GAAAATC
1 CCTTAAAGTATTCAAGATGATCCATTCCTTTAAGCAATTTTCAAACATTCCATGCTCGGGAAAT-
* * * *
1346 T-CATCATTTGGTCTAAATAGTTTGTCATTTTCTACACAAGTTTTGGTCTTTGACTTAAAAACAT
65 TGCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTT
* * ** *
1410 ATTTACCTGAGAATTGTTTCTCGTGGTTCTTGGATGAACTTAAGAACTGGTCAAACTTTT
130 ATTTACGTGAGAATTGTTTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTT
1470 GTGAGATCCT
Statistics
Matches: 697, Mismatches: 92, Indels: 60
0.82 0.11 0.07
Matches are distributed among these distances:
191 12 0.02
192 3 0.00
193 73 0.10
194 2 0.00
195 1 0.00
199 17 0.02
200 1 0.00
202 1 0.00
207 51 0.07
208 21 0.03
212 12 0.02
213 181 0.26
214 180 0.26
215 1 0.00
216 39 0.06
217 96 0.14
218 6 0.01
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (213 bp):
CCTTAAAGTATTCAAGATGATCCATTCCTTTAAGCAATTTTCAAACATTCCATGCTCGGGAAATT
GCATCATTTGGTCTAAATAGTTTGTCATTTTGTAAACAAGTTTTGGTCTTTGAATTAAAAACTTA
TTTACGTGAGAATTGTTTCTCTTGGTTCTTGGATGAACTTCCGAACTTGTCAAACTTTTACGAGT
TCTTTTATAACTTCGGTT
Found at i:1965 original size:39 final size:39
Alignment explanation
Indices: 1874--1965 Score: 130
Period size: 39 Copynumber: 2.4 Consensus size: 39
1864 GGGTTTCAAT
* *
1874 GTGTCTTAGTTTAATACATATTTAATAGTTGTTTTTAAT
1 GTGTCTTAGTTTGATACATATTTAATAGTTGTTTTTAAG
* * *
1913 GTATCTTATTTTGATATATATTTAATAGTTGTTTTTAAG
1 GTGTCTTAGTTTGATACATATTTAATAGTTGTTTTTAAG
*
1952 GTGTCTAAGTTTGA
1 GTGTCTTAGTTTGA
1966 GACAAATTAA
Statistics
Matches: 45, Mismatches: 8, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
39 45 1.00
ACGTcount: A:0.27, C:0.04, G:0.15, T:0.53
Consensus pattern (39 bp):
GTGTCTTAGTTTGATACATATTTAATAGTTGTTTTTAAG
Found at i:5287 original size:11 final size:11
Alignment explanation
Indices: 5273--5367 Score: 75
Period size: 11 Copynumber: 8.1 Consensus size: 11
5263 AAATGAGAGA
*
5273 AAAGAGCAAAG
1 AAAGAGAAAAG
*
5284 AAAGTGAAAAG
1 AAAGAGAAAAG
*
5295 AAAGTGAAAAG
1 AAAGAGAAAAG
5306 AAAGAGAGAAAAG
1 -AA-AGAGAAAAG
*
5319 AAAGTGAAAAG
1 AAAGAGAAAAG
5330 AAAGAGAGAAAAG
1 -AA-AGAGAAAAG
5343 AAAAGGATGAAAAG
1 -AAA-GA-GAAAAG
*
5357 GAAGA-AAAAG
1 AAAGAGAAAAG
5367 A
1 A
5368 GATAGAAAAA
Statistics
Matches: 71, Mismatches: 7, Indels: 13
0.78 0.08 0.14
Matches are distributed among these distances:
10 5 0.07
11 28 0.39
12 9 0.13
13 23 0.32
14 6 0.08
ACGTcount: A:0.66, C:0.01, G:0.28, T:0.04
Consensus pattern (11 bp):
AAAGAGAAAAG
Found at i:5318 original size:13 final size:13
Alignment explanation
Indices: 5300--5345 Score: 69
Period size: 13 Copynumber: 3.7 Consensus size: 13
5290 AAAAGAAAGT
5300 GAAAAGAAAGAGA
1 GAAAAGAAAGAGA
*
5313 GAAAAG-AA-AGT
1 GAAAAGAAAGAGA
5324 GAAAAGAAAGAGA
1 GAAAAGAAAGAGA
5337 GAAAAGAAA
1 GAAAAGAAA
5346 AGGATGAAAA
Statistics
Matches: 29, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
11 8 0.28
12 4 0.14
13 17 0.59
ACGTcount: A:0.70, C:0.00, G:0.28, T:0.02
Consensus pattern (13 bp):
GAAAAGAAAGAGA
Found at i:5320 original size:24 final size:24
Alignment explanation
Indices: 5289--5345 Score: 114
Period size: 24 Copynumber: 2.4 Consensus size: 24
5279 CAAAGAAAGT
5289 GAAAAGAAAGTGAAAAGAAAGAGA
1 GAAAAGAAAGTGAAAAGAAAGAGA
5313 GAAAAGAAAGTGAAAAGAAAGAGA
1 GAAAAGAAAGTGAAAAGAAAGAGA
5337 GAAAAGAAA
1 GAAAAGAAA
5346 AGGATGAAAA
Statistics
Matches: 33, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
24 33 1.00
ACGTcount: A:0.68, C:0.00, G:0.28, T:0.04
Consensus pattern (24 bp):
GAAAAGAAAGTGAAAAGAAAGAGA
Found at i:10914 original size:19 final size:19
Alignment explanation
Indices: 10890--10926 Score: 58
Period size: 19 Copynumber: 1.9 Consensus size: 19
10880 TCAAACCACA
10890 ATTTTT-TTATTTTTCTCGT
1 ATTTTTCTT-TTTTTCTCGT
10909 ATTTTTCTTTTTTTCTCG
1 ATTTTTCTTTTTTTCTCG
10927 ACTTTTTGAT
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
19 15 0.88
20 2 0.12
ACGTcount: A:0.08, C:0.14, G:0.05, T:0.73
Consensus pattern (19 bp):
ATTTTTCTTTTTTTCTCGT
Found at i:12651 original size:29 final size:29
Alignment explanation
Indices: 12618--12675 Score: 98
Period size: 29 Copynumber: 2.0 Consensus size: 29
12608 CATTTATAAG
**
12618 CTTGAATTTGGGCCTTGTGACTCGTATCA
1 CTTGAATTTGGGCCTTACGACTCGTATCA
12647 CTTGAATTTGGGCCTTACGACTCGTATCA
1 CTTGAATTTGGGCCTTACGACTCGTATCA
12676 AAAGGTGTTG
Statistics
Matches: 27, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
29 27 1.00
ACGTcount: A:0.19, C:0.22, G:0.22, T:0.36
Consensus pattern (29 bp):
CTTGAATTTGGGCCTTACGACTCGTATCA
Found at i:13341 original size:50 final size:50
Alignment explanation
Indices: 13255--13380 Score: 155
Period size: 50 Copynumber: 2.5 Consensus size: 50
13245 TGCATGACTT
*
13255 GATTTATAGATGCAAACTTTAACTAACATGGGAGTTACATAATGCATGAT-AA
1 GATTTAT-GATGCAAA-TTTAACTAACATGGAAGTTACATAATGCATG-TCAA
* * * *
13307 GATTTATGATGCATATTTAACTAACATGTAAGTTACTTAATGCATGTCAT
1 GATTTATGATGCAAATTTAACTAACATGGAAGTTACATAATGCATGTCAA
* *
13357 TATTTATGATGCAAACTTAACTAA
1 GATTTATGATGCAAATTTAACTAA
13381 TCACGAGAGT
Statistics
Matches: 65, Mismatches: 8, Indels: 4
0.84 0.10 0.05
Matches are distributed among these distances:
49 1 0.02
50 50 0.77
51 7 0.11
52 7 0.11
ACGTcount: A:0.38, C:0.12, G:0.14, T:0.36
Consensus pattern (50 bp):
GATTTATGATGCAAATTTAACTAACATGGAAGTTACATAATGCATGTCAA
Found at i:15008 original size:11 final size:11
Alignment explanation
Indices: 14988--15019 Score: 57
Period size: 10 Copynumber: 3.0 Consensus size: 11
14978 TTTTGCTATA
14988 GAAATTTTTTT
1 GAAATTTTTTT
14999 G-AATTTTTTT
1 GAAATTTTTTT
15009 GAAATTTTTTT
1 GAAATTTTTTT
15020 TTCAAATTCG
Statistics
Matches: 20, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
10 10 0.50
11 10 0.50
ACGTcount: A:0.25, C:0.00, G:0.09, T:0.66
Consensus pattern (11 bp):
GAAATTTTTTT
Found at i:15636 original size:80 final size:79
Alignment explanation
Indices: 15537--15693 Score: 269
Period size: 80 Copynumber: 2.0 Consensus size: 79
15527 AAGCACTAAT
* *
15537 TTCATTTTAACTCTTGTAGGGAAGATAATGAGTCATGTCTATTCATTATGATCTGATGTAGTTGA
1 TTCATTTTAACTCTTGTAGGGAAGATAATGAGTCATGTCTATTCATTAGGATCTGATGTAGCTGA
15602 AAAGGCATGGCAAA
66 AAAGGCATGGCAAA
* *
15616 TTCATTTTTAACTCTTGTAGGGAAGCTAATGAGTCATGTCTCTTCATTAGGATCTGATGTAGCTG
1 TTCA-TTTTAACTCTTGTAGGGAAGATAATGAGTCATGTCTATTCATTAGGATCTGATGTAGCTG
15681 AAAAGGCATGGCA
65 AAAAGGCATGGCA
15694 TTTCTCCTTA
Statistics
Matches: 73, Mismatches: 4, Indels: 1
0.94 0.05 0.01
Matches are distributed among these distances:
79 4 0.05
80 69 0.95
ACGTcount: A:0.29, C:0.13, G:0.22, T:0.35
Consensus pattern (79 bp):
TTCATTTTAACTCTTGTAGGGAAGATAATGAGTCATGTCTATTCATTAGGATCTGATGTAGCTGA
AAAGGCATGGCAAA
Found at i:16577 original size:17 final size:18
Alignment explanation
Indices: 16536--16579 Score: 54
Period size: 21 Copynumber: 2.3 Consensus size: 18
16526 AGATGATCCA
16536 TTCCTTTATAACTTTCACGAG
1 TTCCTTTATAACTTT--C-AG
16557 TTCCTTTATAACTTT-AG
1 TTCCTTTATAACTTTCAG
16574 TTCCTT
1 TTCCTT
16580 AAAGTATTAT
Statistics
Matches: 23, Mismatches: 0, Indels: 4
0.85 0.00 0.15
Matches are distributed among these distances:
17 8 0.35
21 15 0.65
ACGTcount: A:0.20, C:0.23, G:0.07, T:0.50
Consensus pattern (18 bp):
TTCCTTTATAACTTTCAG
Found at i:19865 original size:430 final size:430
Alignment explanation
Indices: 18403--43926 Score: 18726
Period size: 430 Copynumber: 59.3 Consensus size: 430
18393 TGAATAGTTT
* ** * * *
18403 ATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTTAGTCGATCTTCGGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
18468 AAACTTTTATGAGTTCTTCTATAACATT-GGTTCATTAAAGTATTTAGGACGATCCATTCCTTCG
66 AAACTTTTACGAGTTCTTTTATAAC-TTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * ** * * * *
18532 CA-CAA-TTTTCAGAACATTCCATTCTCAGGAAATTGCATAATACGATCTAAATAGCTGTTATTC
130 -AGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTT
* * * * * * * *
18595 TATAAAACAACATTTGGTCTTT-AGGTTAAAAACTTATTTAGGGGATAATAGTTCCTCTCTTAGT
193 TGT-AAACAACTTTTGGTCTTTGA-ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGT
* * * * * *
18659 TCTCTGCCAAACTTTCAAACTTGACAAACTTTTACGAGTTCTTTTTTAACTT-TGGTTCCATGAA
256 TCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCT-GTTCCTTAAA
* * * *
18723 GTATTCAAAACGATCCATTCCTTCGAGTC-ATTTTTCGAACATTCCTTGCTTGGGAAATTGCATA
320 GTATTCAAGACGATCCATTCCTTCGAG-CAATTTTTCGAACATTCCATGCTTGGGAAATCGCATC
* *
18787 AATTGCTCTAAATAGATTGTCATTTTGTAAACAACTTTTGGTCTTTGA
384 ATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * *** * *
18835 A-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTAGGTTCTCAATCGAACCTCCGAACTTGA
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGA
* * * *
18899 CAAACTTTTACGAGTTCTTTTATAACTTCAGTTACTTAAAATATTCAAGACGATCCATTCCTCCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * * ** * **
18964 AGCCA-TTTTCTGAACAATCCATGCCCTGAAAATCATATCATTTCGT-TCAAATAGTTGAAATTT
130 AGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCT-AAATAGTTGTCATTT
* * * * * *
19027 TATAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGATAATAGTTCCCCTCTAGGTTC
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * *
19092 TCGACAGAACTTCCAAACTTGACAAA-TATTTACGAGTTCTTTTTTAACTTCTGTTCGTTAAAGT
258 TCGGCCGAACTTTCGAACTTGACAAACT-TTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGT
* * * * * *
19156 ACTCAAAATGATACATTCCTTCGTA-CAATTTTTCGAACATTCCATGCTTGGGAAATCGTATCAA
322 ATTCAAGACGATCCATTCCTTCG-AGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCAT
* * *
19220 TTGTTCTAAATAGATTGTCAGTTTGTAAACAACTTTTGGTCTTTAA
386 TTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * *
19266 ATTAAAAAGTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTCGGTCGAATTTCCGAATTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * *
19331 AAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTATAGTATTCAAGACGATCCATTTCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * * * * *
19396 GCCATTTTACGTACAGTCCATGCTTGGGAAATAGCATCATTAGGTCTAAATAGTTGTCATCTTGT
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
* * * *
19461 AAACTACTTTTGGTCTTTGAATTAAAAACTTATTAAGGTGAGAATTGTTTCTTTCTTAGTTCTCG
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCG
* *
19526 GCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCCGTTCCTTAAAGTATTT
261 GCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTC
* * * * *
19591 AAGATGATCCACTCTTTCAAGCAATTTTTTGAACCA-TCCATGC-TGGAGAAATCGCATCATTTG
326 AAGACGATCCATTCCTTCGAGCAATTTTTCGAA-CATTCCATGCTTGG-GAAATCGCATCATTTG
* * * *
19654 GTCTTAATAATTGCCATTTTGTAAACTACTTTTGGTCTTTGA
389 GTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
** * * * * *
19696 ATTAAAAACTTATTTAGGTGAGAATAATTTCCCTCTTGGTTCACAGCCGAACATCTGAAGTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
19761 AAACTTTTACGAGTTCTTTTATAACTTCGGTTCCATAAATTATTCAAGACAATCCATTGCTTTGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * ** * *
19826 GCAATTTTTTGAACATTCGATGCTCAAGAAATCGCATCATTTGGTTTAAATAGTTGTCATTTTAT
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
* * * *
19891 AAAGAACATTTGTTCTTTGAATTAAAAACTTATTTAGGTG-GTAATAGTTTCTCTCTTGGTTCTC
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAG-AATTGTTTCTCTCTTGGTTCTC
* * * * *
19955 GGCCGAAC-TTCTGAAGTTGACAAACTTTTATGAGTTATTTTTTAACTTCGGTTCCTTAAAGTAT
260 GGCCGAACTTTC-GAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * * * * ** * * *
20019 TGAATACGATCCATTCCTTAGTGTAATTACTCGAACATTCCATG-TTCAGGAAATTGCATCAATT
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTT-GGGAAATCGCATCATTT
* * *
20083 GTTCTAAATAGATTGTCATTTTGTAAA-AAGCTTTTGTTCTTTAA
388 GGTCTAAATAG-TTGTCATTTTGTAAACAA-CTTTTGGTCTTTGA
* * * * *
20127 ATTAAAAAGC-TATTTATGTGAGAATTGTTTCTTTCTTGGTTCTTGGTCAAACTT-TCGAACTTG
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTG
* * *
20190 AC--A-----A--A---C-TTT-T-A------TTCCATAAATTATTCAAGACGATCCATTTCTTC
64 ACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * * *
20234 AAGCAA-TTTTCTGAACATTCCATGCTTGGGAAATC-CAGTCTTTTGGTCTAAATATTTGTCATT
129 GAGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCA-TCATTTGGTCTAAATAGTTGTCATT
* * * ** * *
20297 TTGTAAACAACTTTTGGTCTTTAAATTTAAAAGTTATTTATATGAGAATTATTTCTTTCTTGGTT
192 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTT
* * * *
20362 CTCGGTCGAACATCCGAACTTGACAAACTTTTACGAGTTCATTTATAACATT-TGTTCCTTAAAG
257 CTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC-TTCTGTTCCTTAAAG
* * * * * * *
20426 TATTCAAGACTATCCATTCCTTCGAGCCATTTTCCGTACAGTCTATGCTTGGGAAATTGCATCAT
321 TATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCAT
* * *
20491 TAGATCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTCA
386 TTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * *
20536 ATTAAAAACTTATTTAGGTG-GTAATAGTTTCTCTCTTGGTTCTCGGTCAAACTTCCGAAGTTGA
1 ATTAAAAACTTATTTAGGTGAG-AATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGA
* * * * *
20600 CAAACTTTTATGAGTTCTTTTTTAACTTTTGCTCCTTAAAGTATTGAAGACGATCCATTCCTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* ** * * * * *
20665 TGCAATTACTCAAACATTCCATGTTCGGGAAATTGCATCAATTGTTCTAAATAGATTGTCATTTT
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTTT
* * * * * * *
20730 GTAAA-ACCTTTTGTTCTTTAAATTAAATAGTTATTTATGTGAGAATTGTTTCTTTCTTGGTTCT
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
** ** * *
20794 TAGTTGAACTTTCGAACTTGACAAACTTTTACGAGTTCATTTATAACTTTTGTTCCTTAAAGTAT
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * * * * * * * *
20859 TCAAGACTATCCATTCCTTCGAGCCATTTTCCGTAGAGTCTATGCTTGGGAAATTGCATCATTAG
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTG
* *
20924 ATCTAAATAGTTGTCATTTTATAAACAACTTTTGGTCTTTGA
389 GTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
** *
20966 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGATCGAACTT-TCAAACTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTGA
* * *
21030 CAAACTTTTACAAGTTCTTTTATAACTTCGGTTCCTTACAGTATTCAAGACGATCCATTCCTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * *
21095 AGCAATTTTTCAAACATTCCATGCTCGAGAAATCACATCATTTGGTCTAAACAGTTGTCATTTTG
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * *
21160 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTTGGTGAGAATAGTTCCTCTCTTGGTTCAC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * * * *
21225 GCCCAAACTCTCAAAGTTGACAAACTTTTACAAGTTCTTTTATAACTTC-GATTCCTTAAAGTAT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGTAT
* * * ** * * *
21289 TCAAGATGATCCATTCCTTCGAGCAA-TTCTCAGAACATTCCAAGCTCAGGAAATTGAATCACTT
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATCATTT
* *
21353 GGTCTAAATAGTTGTCATTTTATAAACAACTTTTGATCTTTGA
388 GGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * *
21396 ATTAAAAACTTATTTAGGTGATAATAGTTTCTCTATTGGTTCTCAGCCGACCTTCCGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
21461 AAACTTTTACGAGTACTTTTTTAACTTTTGTTCCTGAAAGAATTCAAGATGATCCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * *
21526 GCAATTTTTTGAACATTCCATTCTCGGGAAATCGCATCAATTGTTCTAAATAGATTGTCATTTTG
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTTTG
* * * *
21591 T----AA-------------AA--AAAAAGTTATTTATGTGAGAATTGTTTCTTTCTTTGTTCTC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * * *
21637 GGTCGAAC-TTCTGAACTTGAAAAACTTTAACGAGTTCTTTTATAACTTTTGTTCATTAAAGTAT
260 GGCCGAACTTTC-GAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * * * * * *
21701 TCAAGATGATCCATTCTTTCGAGCAA-TTTTCCATACAGTCCATGCTTGGGAATTCACATCATTA
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGA-ACATTCCATGCTTGGGAAATCGCATCATTT
* * * *
21765 GGTCTAAATTGTTGTTATTTTTTTAAACTACTTTTGGTCTTTGA
388 GGTCTAAATAGTTGTCA-TTTTGTAAACAACTTTTGGTCTTTGA
* ** * * *
21809 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTCTCGATCAAACTTCCGAACTTGAA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * ** * **
21874 AAACTTTTACGAGTTCTTTTATAACTTCTATTCCTTAAACTATTCAAGAATATCCATTCGTTTTA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
** * ** * * * *
21939 GCAATTTTAAGAATATTCCATGCTCTAGAAATCACATCATTTAGTCTAAATAGTTGCCATTATGT
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
* * * *
22004 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGA-AATAGTTTCTCTCCTGGATCTAG
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCG
* * * *
22068 GCCGAACTTCCGAAGTTAACAAACTTTT-CTGAGTTCTTTTATAACTT-TGGTTCTTTAAAGTAT
261 GCCGAACTTTCGAACTTGACAAACTTTTAC-GAGTTCTTTTATAACTTCT-GTTCCTTAAAGTAT
* *
22131 TCAAGACGAACCATTCCTTCAAGCAA-TTTTCTGAACATTCCAAGCTTAGCAATTTTCAAACATT
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCC-A---T-G---------------
* * *
22195 CTATACTTGGGAAATCGCATGAATT-GTACTAAATAGATTGTCATTTTGTAAACAACTTTTGGTG
368 -----CTTGGGAAATCGCATCATTTGGT-CTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTC
22259 TTTGA
426 TTTGA
* * * *
22264 A-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACCTCCGAACTTGA
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGA
* * *
22328 CAAACTTTTACGAGTTCTTTTAAAACTTTTGTTCCTTAAAGTATTCAAGATGATCCATTCCTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * *
22393 AGCAGTTTTTCGAACATTACATGCTTGGGAAATCGTATCATTTGGTCTAAATAGTTGTGATTTTG
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * *
22458 TAAACAAATTTTGGTCTTTGAATTAAAAAATTATTTATGTGAGAATTGTTTCTTTCTTGGTTCTC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * *
22523 GGCCGAACTTT-AAACTTGACAAACTTTTTTACAAGTTCTTTTATAACTTTTGTTCATTAAAGTA
260 GGCCGAACTTTCGAACTTGACAAAC--TTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTA
* * * *
22587 TTCAAGACGATCCATTCCTTCGAGCAA-TTTTCTGTACAGTCCATGCTTGGAAAATCACATCATT
323 TTCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATCATT
* * * *
22651 AGCTCTAAATAGTTGTCATTTTGTAAACTACTTTTGGT-TTTCCA
387 TGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTT-GA
* * * * * *
22695 ATTATAAACTTATTTAGGTGAGAATTGTTTCTCTTTTAGTTCTCGGCAGAATTTAC-GAACCTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTT-CTGAACTTGA
* * * * * * *
22759 AAAACCTTTACGAGTTCATTCATAACTAC-GATTCCTTAAAGTATTCAGGACGATCCATTCCTTT
65 CAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTTC
** * * *
22823 GAGCAATTTCCCGAACATTCCATGCTCGAGAAATCGCA-CAATTTGGTCTGAATAGTTGTAATTT
129 GAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATC-ATTTGGTCTAAATAGTTGTCATTT
* * * *
22887 TGTGAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAATAGTTACTCTCTTGGTTC
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * * * *
22952 TAGGCTGAACTTTCAAAGTTAACAAACTTTTACGACTTCTTTTATAACTTCGGTTCCTTAAATTA
258 TCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTA
* **
23017 TTCAAGACG----A-TCC-TCGAGCAA-TTTTCTGAACATTCCAAGCTCAGGAAATCGCATCATT
323 TTCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATCATT
* *
23075 TGGTCTAAATAGTTGTCATTTTATAAAAAACTTTTGGTCTTTGA
387 TGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * *
23119 ATTAAAAAACTTATTTAGGTGATAATAGTTTCTCTCTAGGTTCTGGGCCGAACTT-TCGAACATC
1 ATT-AAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTG
* * * * * * * * *
23183 AAAAACCTTTACGAGTTCTTTTTTAACATC-GATTCCTTTAATTATTCAACACGATCTATACCTT
64 ACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * * * * * * * *
23247 TGAGCAATTTTTCGAACGTTCCATTCTCAGGAAATCGCATAAATTGTTCTAAATAGATTTTTATT
128 CGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATT
* * * *
23312 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTAAGAATTGTTTCTTTCTAGGTT
192 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTT
* * * *
23377 CTTGGCCGAAC-TTCTGAACTTGACAAACTTTTATGAGTTCTTTTATAACTTTTATTCCTTAAAG
257 CTCGGCCGAACTTTC-GAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAG
* * * * * * * **
23441 TATTCAAGACGATCCATTCCTCCCAGCCATTTTCCGAACAATCCGTGGAC-T-GGAAATTGTGTC
321 TATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCAT-G-CTTGGGAAATCGCATC
* *
23504 ATTTGGT-TCAAATAGTTGTCATTATATAAACAACTTTTGGTCTTTGA
384 ATTTGGTCT-AAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * ** ** *
23551 ATTAAAAACTTATTTAGGTGATAATAG-TT-AATCTAAGTTCTCGGCAGAACTT-TCGAACTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTGA
* * * * * *
23613 CAAAC-ATTAAGAGTTCTTTGT-TGACTT-TGATTCCTTAAAGTATTCAAGATGATCTAGTCCTT
65 CAAACTTTTACGAGTTCTTT-TATAACTTCTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * * * * * * *
23675 CGCA-CAATTCTCCCAACATTCCATTCTCAGGAAATCGTATCATTTGTTCTAAATAGATTGACAT
128 CG-AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCAT
* * * *
23739 TTTGTAAACAACTTTTGGTCTTTAAATT-AAAAGTTATTTATGTGAGAATTGTTTCTTTCTTGGT
191 TTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGT
** * * * * * *
23803 TCTCGGTTGTACTTCCAAACTTGACTAACTTTTACGAGTTTTTTTATAACTT-TATTCCTTAAAG
256 TCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAG
* * * * *
23867 CATTCAAGACAATCCATTCCTTCGAGCCATTTTTTGAACAGTCCATGCTTGGGAAATCGCATCAT
321 TATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCAT
*
23932 TAT-GTCTAAATAGTTGTCATTTTGTAAACTACTTTTGGTCTTTGA
386 T-TGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * ** *
23977 ATTAAAAACTTATTTAGGTGTGAATTGTTTCTTTCTTGGTTCTCGATCGAACTTTTGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * *
24042 AAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAATATTTAAGACGATCGATTCCTTCAA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * ** * *
24107 GAAATTTTTCAAACATTCCACGCTCAAGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTAT
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
* * * * * *
24172 AAACAACTTTTGGTCTTTGAATTAAAAACATATTTAAGTGATAATAGTTCCTCTCTTGGTTCTCA
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCG
* * * * * *
24237 GCCAAACTTTCGAAGTTGACAAACTTTTACGAGTTCTTTTTTAACTTCAGTTCCATAAAGTACTC
261 GCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTC
* * * * * * * *
24302 AACACGATCCATTCCTTTGAGCAATTTTTCGAACATTCTATGCTTGGAAAATAGCATAAATTGTT
326 AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGGT
* * *
24367 CCAAATAGATAGTCAGTTTGTAAACAACTTTTGGTCTTTGA
391 CTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * *
24408 A-TAAAAATGTTATTTATGTAAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCGGAACTTGA
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGA
* *
24472 CAAACTTTTACGAGTTCTTTTAAAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * *** * * * * *
24537 TGCAATTTCTCGAACATGGAATGTTCGAGAAATTGCATCAATTGTTCTAAATAGATTGTCATTGT
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATT-T
*** * * * * ** * * * *
24602 AAAAAAAAACTTATGTTCTTTAAATTAAAATGTTATTTATGTGGGAATTGTTT-TTTCTTTGTTC
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC
* * *
24666 TCGGTCGAAC-TTC---C--G---AAC--TT--GA---C----A-AACTTTTGTTCCATAAAGTA
258 TCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTA
* * * *
24710 TTCAAGACTATCCATTCCTTCGAGCAATTTTTCGAACATTCAATGCTTGAGAAATCGAATCATTT
323 TTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTT
* *
24775 GGTCTAAATATTTGTCATTTTGTAAACAACTTTGGGTCTTTGA
388 GGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * *
24818 ATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCAGTCGAACTTCCGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * ** * *
24883 AAACTTTTGCGAATTCTTCTATAA-TATCAGTTCAATAAAGTATTTAAGACGATCAATTCCTTCG
66 AAACTTTTACGAGTTCTTTTATAACT-TCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * *
24947 CA-CAATTTTTCGAACATTCTATGCTCAGGAAATTGCATCATATGGTCTAAATAGTTGTCATTTT
130 -AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTT
* * * * * * * *
25011 ATAAACAACTTTTGGTGTTTGAATTAAAAACATATTTAAGTGATAATAGTTCCTCTCTTGGTTCC
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
* * * * * * *
25076 CAGCCAAACTTTCGAAGTTGACAAACTTTTACGAGTTCTTTTTTAACTTCAGTTCCATAAAGTAC
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * * * * * *
25141 TCAACACGATCCATTCCTTTGAGCAATTTTTCGAACATTCTATGCTTGGAAAATAGCATAAATTG
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTG
* * * * *
25206 TTCCAAATAGATAGTCAGTTTGTAAACAACATTTGGTCTTTGA
389 GTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * *
25249 A-TAAAAATGTTATTTATGTAAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCGGAACTTGA
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGA
* * *
25313 CAAACTTTTACGAGTTCTTTTAAAACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCGTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * *
25378 AGCAGTTTTTCTAACATTACATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTGATTTTG
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * ** *
25443 TAAACAACTTTTGGTCTTTAAATTAAAAAATTCTTTATATGAGAATTGTTTCTTTCTTGGTTCTC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * * * * *
25508 GGTCGAACATT-AAACTTAACAAACTTTTACAAGTTCTTTTATAACTTTTGTTCATTAAAGTATT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATT
* * * * * * * * * *
25572 CAACACGGTCCATTCCTTCAAGCAA-TTTTCAAAAATTCCATACTTGGGAAATCACATAAATTGT
325 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGG
* *
25636 TCTAAATAGATTATCATTTTGTAAACAACTTTTGGTGTTTGA
390 TCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * **
25678 A-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGATCGAACTT-TCGAACTTG
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTG
* * * * * *
25741 ACAAACTTTTACGAGTTCTATTAAAACATT-TGTTCCTTAGAGTATTTAAGA-TATTCATTCCTT
64 ACAAACTTTTACGAGTTCTTTTATAAC-TTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * * * *
25804 CGAGCAATTTTTCGTACAGTT-CATACTTGGGAAATCACATCATTAGGTCTAAATAGTTGTCATT
128 CGAGCAATTTTTCGAACA-TTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATT
* * * *
25868 ATGTAAA-TACTTTTGGTTTTTCAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTT
192 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTT
** * * *
25932 CTCGATCGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTAAAACATT-TGTTCCTTAGAG
257 CTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC-TTCTGTTCCTTAAAG
* * * * * *
25996 TATTTAAGA-TATTCATTCCTTCGAGCAATTTTTCGTACAGTT-CATACTTGGGAAATCACATCA
321 TATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACA-TTCCATGCTTGGGAAATCGCATCA
* * * * *
26059 TTAGGTCTAAATAGTTGTCATTATGTAAA-TACTTTTGGTTTTTCA
385 TTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * **
26104 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTGTTTTGGTTCTCGACCGAACTTAC-AAACCAGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTT-CTGAACTTGA
* * * *
26168 AAAACTTTTACGAGTTCTTTCATAACTTC-GATTCCCTAAAGTATTCAAGACGATCCATTCATTC
65 CAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * * *
26232 GAGCAATTTTTCAAACATTCAATCCTCGAGAAATCGCATCATTTGGTCT-AA-A----T-A----
129 GAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTT
* * *
26286 G--------TTTTGGTCTTTGAATTAAAAACTAATTTAGGTTAGAATTGTTTCTCTCTTGCCTT-
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTG-GTTC
* * * *
26342 TGGGTCGAACTTTCAAAGTTGACAAACTTTTACGAGTTCTTTTATAACTT-TGGTTCCTTAAAGT
258 TCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCT-GTTCCTTAAAGT
* *
26406 ATTCAAGACGATCCATTCCTTCGAGCAA-TTTTCTGAACATTTCATGCTTGGGAAATCGTATCAT
322 ATTCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATCAT
*
26470 TTGGTCTAAATAGTTGTCATTTTGTAGACAACTTTTGGTCTTTGA
386 TTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * *
26515 ATTAAAAAATTCTATATGTGAGAATTATTTCTTTCTTGGTTCTCGGCCGAACTT-TAAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * *
26579 AAACTTTTACAAGTGCTTTTATAACTTTCT-TTCATTAAAGTATTCAAGATGATCCATTCCTTCG
66 AAACTTTTACGAGTTCTTTTATAAC-TTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * * * *
26643 ACCAA-TTTTCTGTACAGTCCATGCTTGGGAAATCACATCATTAGGTCTAAATAGTT-TTATTTT
130 AGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTT
* * *
26706 GTAAACTACTTTTGGT-TTTCCAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTC
194 GTAAACAACTTTTGGTCTTT-GAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * * *
26770 TTGGCTGAACTTACGAACCTGAAAAACTTATACGAGTTCTTTCATAACTT-TGATTCCTTAAAGT
258 TCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGT
* * * * * * *
26834 ATTCAGGGCGATCCATTCCTTTGA-CAATTTTTCGAACATTCGATGCTAGAGAAATTGCATCATT
322 ATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATT
* *
26898 TGGTCT-AATAGTTGTAATTTTGTAAACAACTTTTGGTCTTTAA
387 TGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * *
26941 ATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTAGGCCGAACTTCCGAAGTTAAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
27006 AAACTTTTACGACTTATTTTATAACTTCAGTTCCTTAAAGTATTCAAGATGATACATTCCTTCAA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * ** * * * *** *
27071 GCACTTTTTTGAACATTTTAAGCTCAGGAAATCGCTTTGGTTGGTCTAAATAGTTGTCATTTTAT
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
* * * *
27136 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGATAATAGTTTCTCTCTAGGTTCTAG
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCG
* * * * * * *
27201 ACCGAACTTTCGAACTTCAAAAACCTTTACGAGTTCTTTTTTAACTTCAGTTCCTTAAATTATT-
261 GCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTC
* * * * * * * * *
27265 TAGATGATCTATACCTTCGAGCAATTTTTCAAACATTCAATTCTTGGGAAATCGCATCAATTGTT
326 AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGGT
*
27330 CTAAATAGATTGTCGTTTTGTAAACAACTTTTGGTCTTTGA
391 CTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * * * *
27371 AATAAAAACTTATTTATGTAAGAATTGTTTCTTTCTAGGTTCTCAGCCAAACTTTTGAACTTAAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * *
27436 AAACTTTTACGAGTTCTTTTAT-AGTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTCCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * ** ** * **
27500 GCCATTTTCCGAACAATCCATGCTCTGGAAATCATATCATTTCAT-TCAAATAGTTGTAATTTCA
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCT-AAATAGTTGTCATTTTG
* * * * **
27564 TAAACAACTTTTGGTATTTGAATTAAAAACTTATTTAGGTGATAATAGTTCCTCTCTAAGTTCTC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * * * * **
27629 GGCAGGACTTCCGAACTTGAAAAACATTTACGAGTTCTTTTTTTAACTTGGGTTCCTTAAAGTAT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTC-TTTTATAACTTCTGTTCCTTAAAGTAT
* * * * *
27694 TCAAGATGATCCATTCCTTCGCGTAATTTTCCGAACATTCCATGCTCGGGAAAT--CA--A-TTG
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTG
* * ** *
27754 TTCTAAATAGATTGTCATTTTGTAAACAACTTTCGACCTTTAA
389 GTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * *
27797 ATTAAAAAGTTATTTATGTGAGAATTGATTCTTTCTTGGTTCTCGGTCGAACTTCTGAATTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * *
27862 AAAATTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACAATTCATTCCTTAGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * * * *
27927 GCCATTTTAC-ATACAGTCCTTGCTTGGGAAATCGCATCATTAGGTCTAAATAGTTGTCATCTTG
131 GCAATTTTTCGA-ACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * * * *
27991 TAAACTACTTTCGGTCTTTGAATTAAAAACTTATTTAGGTAAGAATTGTTTCTTTCTTAGTTCTT
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * *
28056 GGCCGAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTATAACTTCAGTTCATTAAAGTATT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATT
* * * * * *
28121 TAAGACGATCCACTCCTTCAAGCAATTTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGG
325 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGG
28186 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
390 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
** ** * *
28227 ATTAAAAACTTATTTAGGTGAGAATAATTTCTCTCTTGGTTAACGGCCGAACATCTGAAGTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
28292 AATCTTTTACAAGTTCTTTTATAACTTCGGTTCCATAAATTATTCAAGACAATCCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* *** *
28357 GCAATTTTTTGAACATTCCATGCTCAATAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTAT
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
* * * * ** *
28422 AAAGAACATTTGTTCTTTGAATTAAAAACTTATTTAGGTG-GTAATAGTTTCTCAATTGGTTCTT
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAG-AATTGTTTCTCTCTTGGTTCTC
* * * * * *
28486 GGCCGAAC-TTCTGAAGTTGACAAACTTTTATGAGTTATTTTTTAACTTCGGTTCCATAAAGTA-
260 GGCCGAACTTTC-GAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * ** * * * *
28549 TCGAAGATGATCCATTCCTTCGTGCAATTACTCGAACCTTCCATG-TTCAGGAAATTGCATCAAT
324 TC-AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTT-GGGAAATCGCATCATT
* * *
28613 TGTTCTAAATAGATTGTCATTTTGTAAA-AAGCTTTTGTTCTTTAA
387 TGGTCTAAATAG-TTGTCATTTTGTAAACAA-CTTTTGGTCTTTGA
* * * * * *
28658 ATTAAAAAGTTATTTATGTGAAAATTGTTTCTTTCTTGGTTCTTGGTCGAACTT-T---C--G--
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * *
28715 -AAC-TTGACGA--AC-TTT-T-A------TTCCATAAAGTATTCAAGACGATCCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * *
28767 GCAA-TTTTCTAAACATTCCATGCTTGGGAAATCGAATCATTTGGTCTAAATATTTATCATTTTG
131 GCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * * * * *
28831 TAAACAACTTTTGGTCTTTAAATTTAAAAGTTATTTATGTGATAATTGTTTCTTTCTTTGTTCTC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
** * * * *
28896 GATCGAACTTTCGAACTTGACAAAATTTTACAAGTTTTTTTATAACTTCGGTTCCTTAAAGTATT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATT
* * * * *
28961 TAAGACGATCCATTCCTTCAAGCAATTTTTCGAGCATTCCATGCTCGAGAAATCGCATCATTTGG
325 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGG
29026 TCTAAATAGTTGTCATTTTGTAAACAACTTTT-GTCTTTGA
390 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* ** * ** * *
29066 ATTAAAAATTTATTTAGGTGAGAATAATTTCTCTCTTTGTTCAT-GGTTGAACTTCCGAAGTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC-TCGGCCGAACTTCTGAACTTGA
* * * * *
29130 CAAACTTTTATGAGTTCTTTTATAACATCGGTTCCATAAATTATTCAAGACGATCCATTCCTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * *
29195 AGCAATTTTTTGAACATTCCTTGCTCAGGAAATTGCATCATTTGGTCTAAATAGTTGTCATTTTA
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * * * *
29260 TAAACAACATTCGGTCTTTGAACTAAAAACATATTTAGGTGATAATAGTTTCTCTCTTGGTTCTC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * *
29325 GGCCAAACTTTCGAAGTTGACAAACTTTTACGAGTTCTTTTTTAACTTCTGTTCCTTAAAGTATT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATT
* * * * * *
29390 TAAGATGATCCATTCCATCGTGCAATTTTTCGAACATTCCAAG-TTCGGGAAATCGCATCAATTG
325 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTT-GGGAAATCGCATCATTTG
* * * * * *
29454 TTCTAAATAGATTGTCATTTTGTAAAAAAAAAAAAATTATGTTCTTTAA
389 GTCTAAATAG-TTGTCATTTTGT------AAACAACTTTTGGTCTTTGA
** * * * * *
29503 ATTAAAATGTTATTTATGTGAGAATTGTTT-TTTCTTTGTTCTCGGTCGAACTTCCGAACTTG--
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* ** *
29565 AAA-----A--A---C-----T---TT-TGTTCCATAAAGTACCCAAGATGATCCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * *
29611 GCAATTTTTTGAACACTCCATGCTTGGGAAATCGAATCATTTGGTCTAAATATTTGTCATTTTGT
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
* * *
29676 AAACAACTTTGGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCA
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCG
* * * * * * ** *
29741 GTCGAACTTCCGAACTTGACAAACTTTTACGAATTCTTCTATAACATCAGTTCAATAAAGTATTT
261 GCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTC
* ** * *
29806 AAGACGATCCATTCCTTCGCA-CAATTTTCCGAACATTCCATGCTCAGGAAATTGCATCATATGG
326 AAGACGATCCATTCCTTCG-AGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGG
* * *
29870 TCTAAATAGTTCTCATTTTATAAACAACTTTTGGTGTTTGA
390 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * *
29911 ATTAAAAACATT-TTTAAGTGATAATAGTTCCTCTCTTGGTTCTCAGCCAAACTT-TCGAAGTTG
1 ATTAAAAAC-TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTG
* * * *
29974 ACAAACTTTTACGAGTTCTTTTTTAACTTCAGTTCCATAAAGTATTCAACACGATCCATTCCTTC
64 ACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * * * * * * * *
30039 GAGTAATTTTTTGAACATTCTATGCTTGGAAAATCGCATAAATTGTTCCAAATAGATTGTCATTT
129 GAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTT
* * *
30104 TGTAAACAACTTTTGGTCTTTGAA-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTAGTT
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTT
* *
30168 CTCGGCCGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTAAAACATT-TGTTCC-TAAGA
257 CTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC-TTCTGTTCCTTAA-A
* * * * * * * * *
30231 GTATTTAATATGATTCATTCCTTCGAGCAATTTTTCGTACAGTCCATACTTGGGAGATTGCATCA
320 GTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCA
* * ***
30296 TTCGGTCTAAATAGTTGTGATTTTGTAAACAACTTTCAATCTTTGA
385 TTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * *
30342 ATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCTTGGTTCTCGGCCGAACTT-TAAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * *
30406 AAACTTTCAATTTTTCGCACAAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAAGATGATCC
66 AAA----C---TTTT---ACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCC
* * * * * *
30471 ATTCCTTCGAGCAATTTTAT-GTACAGTCCATGCTTGGAAAATCACATCATTAGGTCTAAATAGT
121 ATTCCTTCGAGCAATTTT-TCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGT
* * *
30535 TGTCATTTTGTAAACTATTTTTGGT-TTTCCAATTAAAAACTTATTTAGGTGAGAATTGTTTCTC
185 TGTCATTTTGTAAACAACTTTTGGTCTTT-GAATTAAAAACTTATTTAGGTGAGAATTGTTTCTC
* * * * * * * *
30599 TTTTGGTTCTCGGCAGAACTTACGAACCTT-AAAAACCTTTACGAGTTCATTCATAACTAC-GAT
249 TCTTGGTTCTCGGCCGAACTTTCGAA-CTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-T
*** * ** * * * *
30662 TCCTTTGGGCAATTTCCCGAAC-ATTCCA-TGC-TCGAG-AA---ATCGCACAATT---TGGTT-
312 TCCTTAAAG-TA-TTCAAG-ACGA-TCCATTCCTTCGAGCAATTTTTCGAAC-ATTCCATGCTTG
* * ** * * ** * * *
30716 CG-AATTGTTGTAATTTTGTGAACAACT-TTTGGTC--TTTGAATTAAA-AAC-----CTATTT-
372 GGAAATCG-CATCATTTGGTCTA-AA-TAGTT-GTCATTTTG---TAAACAACTTTTGGTCTTTG
30770 A
430 A
** * * * * ** * * * *
30771 GGTGAGAA--TAGTTA-CT--CTATTG-----------GTTCTAGGCTGAACTT-TCGAAGTTAA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTGA
* * *
30819 CAAACTTTTATGACTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACG----A-TCCTTC-
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * ***
30878 -G-AA-TTTTCTGAACATTCTAAGCTCAGGAAATCGCTTTGGTTGGTCTAAATAGTTGTCATTTT
130 AGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTT
* * * * * * *
30940 ATAAAAAAACTTTTGGTCATTGATTTAAAAAACTTATTTAGGTGATAATAGTTTCTCTCTAGGTT
194 GT-AAACAACTTTTGGTCTTTGAATT-AAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTT
* * * * * * * * * * *
31005 CTGGGCCGAACTTTCAAACATCAAAAACCTTTACGAGTTCTTTTTTAACATC-GATACCTTTAAT
257 CTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAG
* * * * * * * * *
31069 TATTCAACACGATCTATACCTTCGAGCAATTTTTCAAACATTCCATTCTTAGGAAATCACATAAA
321 TATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCAT
*
31134 TTGTTCTAAATAGATTGTCATTTTGTAAACAACTTTTGGTCTTTGA
386 TTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * *
31180 ATTAAAAATTTATTTATGTAAGAATTGTTTCTTTCTAGGTTCTCGGTCGAACTTCCGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
31245 AAACTTTTATGAGTTCTTTTAGAACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTCCCA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * ** * *
31310 GCCA-TTTTCTGAACAATCCATGCTTTGGAAATTGTATCATTTGGT-TCAAATAGTTGTCATTTT
131 GCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCT-AAATAGTTGTCATTTT
* * * * * * * ** *
31373 ATAAACAACTTTTGGTATTTGAATTAAAAATTTATTTAGGAGATAATAGTTCCAATCTAGGTTCT
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
* * * * * *
31438 CGACAGAACTTTCAAACTTGACAAACATTTAAGAGTTCTTTGT-TGACTTC-GATTCCTTAAAGT
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTT-TATAACTTCTG-TTCCTTAAAGT
* * * * * *
31501 ATTCAAGACGATCTAGTCCTTCGCA-CAATTTTCCCAACATTCCATGCTCGGGAAATCGTATCAT
322 ATTCAAGACGATCCATTCCTTCG-AGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCAT
* * *
31565 TTGTTCTAAATAGATTGGCATTTTGTAAA-ATACTTTTGGTCTTTAA
386 TTGGTCTAAATAG-TTGTCATTTTGTAAACA-ACTTTTGGTCTTTGA
* * * * ** * **
31611 ATT-AAAAGTTATTTATGTGAGAATTGTTTCTTTCTTAGTTCTCGGTGGTACTTCCAAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * *
31675 AAACTTTTTCGAGTTTTTTTATAACTT-TATTCCTTAAAGCATTCAAGACAATCCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * * *
31739 GCCA-TTTTCTGAACAGTCCATGCTCAGGAAATTGCATCATATGGTCTAAATAGTTCTCATTTTG
131 GCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * * * * *
31803 TAAACAATTTTTGGTGTTTGAATTAAAAACATATTTAAGTGATAATAGTTCCTCTCTTGGTTCTC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * * * *
31868 AGCCAAACTTTCGAAGTTGACAAACTTTTACGAGTTCTTTTTTAACTTCAGTTCCATAAAGTATT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATT
* * * * * * *
31933 CAACACGATCCATTCCTTTGAGCAATTTTTCAAACATTCTATGCTT-GGAAACTCACATAAATTG
325 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAA-TCGCATCATTTG
* *
31997 TTCCAAATAGATTGTCATTTTGTAAACAACTTTTGGTCTTTGA
389 GTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * *
32040 A-TAAAAATGTTATTTATGTGAGAATTATTTCACTCTTGGTTCTCGGCCGAACTT-TCGAACTTG
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTG
* * *
32103 ACAAACTTTTACAAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAAGACGATCCATTCCTTC
64 ACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * * * * *
32168 GAGCAA-TTTTCTGTACAGTCCATGCTTGGAAAATCACATCATTAGGTCTAAATAGTTGTCATTT
129 GAGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTT
* * * *
32232 TGTAAACTATTTTTGGT-TTTCCAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTT
193 TGTAAACAACTTTTGGTCTTT-GAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTT
* * * * * * * *
32296 CTCGGCAGAACTTACGAACCTGAAAAACCTTTACGAGTTCATTCATAACTAC-GATTCCTTAAAG
257 CTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAG
* * * * *
32360 TATTCAAGACGATCCATTCCTTTGAGCAA-TTTCCAGAACATTCCATGGTCGAGAAATCGCA-CA
321 TATTCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATC-
* * * *
32423 ATTTGGTCTGAATAGTTGTAATTTTGTGAACAACTTTTGGTCTTCGA
384 ATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * * *
32470 ATTAAATTAAAATGTTATTTATGAGAGAATTCTTT-TTTCTTTGTTCTCGGTCAAACTT-T---C
1 ATT--A--AAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAAC
*
32530 --GAGC--A----T--GA---C----A-AACTTTTGTTCCATT-AAGTATTCAAGACGATCCATT
61 TTGA-CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCC-TTAAAGTATTCAAGACGATCCATT
* * * * *
32576 CCTTCGAGTAATTTTTTGAACATTCCATGCTTGGGAAATCGAATCATTTGGTCTAAATATTTGTC
124 CCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTC
* * *
32641 ATTTTGTAAACAACTTTGGGACTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTG
189 ATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTG
* * * * * * * * *
32706 GTTCTCAGTCGAACTTTCGAACTTGACAAAC-GTCACGAATTCTTCTATAACATCAGTTCATTAA
254 GTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAA
* * ** **
32770 AGTATTTAAGACGATCCATTCCTTCGCA-CAATTTTCCGAACATTCCATGCTCAGGAAATTACAT
319 AGTATTCAAGACGATCCATTCCTTCG-AGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCAT
* * *
32834 CATATGGTCTAAATAGTTCTCATTTTATAAACAACTTTTGGTCTTTGA
383 CATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * * * *
32882 ATTAAAAACATATTTAAGTGATAATAGTTCCTCTCTTGGTTCTCAGCCAAACTT-TCAAAGTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTGA
* * * * * * *
32946 CAAAATTTTACGAGTTCTTTTTTAACTTCAGTTCCATAAAGTATTAAACACGATCCATTCCTTCA
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
** * * * * * * *
33011 AGCAATTTTTCGAACATTCTGTACTTGGGAAATCACATAAATTGTTCCAAATAGATTGTCATTTT
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTTT
* * *
33076 GTAAACAACTTCTGGTCTTTGAA-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTGGTTC
194 GTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * *
33140 TCGGCCAAACTTCCGAACATGACAAACTTTTATGAGTTCTTTTAAAACTTTTGTTCCTTAAAGTA
258 TCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTA
* * *
33205 TTCAAGACGATCCATTCCTTTGAGCAGTTTTTCGAACATTACATGCTTGGGAAATCGCATCATTT
323 TTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTT
*
33270 GGTCTAAATAGTTGTGATTTTGTAAACAACTTTTGGTCTTTGA
388 GGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * *
33313 ATTAAAAACTTATTTAGGTGATAATAGTTTCTCTCTAGGTT-TTGGTCCGAACTT-TCGAACTTC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGG-CCGAACTTCT-GAACTTG
* * * * * *
33376 AAAAAC-TTTACGAGTTCTTTTTTAACTTCGGTTCCTTAAATTATTCAAGACGATCTATACCTTC
64 ACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * * * * * * * * *
33440 AAGCAGTTTTTCAAACATTCAATTCTTGGGAAATCTCATCAATTGTTCTAAATAGATTGTCGTTT
129 GAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTT
* * * * *
33505 TATAAACAACTTTTGGTCTTTGAAATAAAAACTTATTTATGTAAGAATTGTTTCT-TTTTAGGTT
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTT-GGTT
* * * *
33569 CTCGGCCGAACTTTTGAACTTGACAAACTTTTACGAGTTCTTTTAT-AGTTTTATTCCTTAAAGT
257 CTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGT
* **
33633 ATTC-A-A-G--CCATT--TT-TA--AA-----C--A-A-TCCATGCTCT-GGAAATCATATCAT
322 ATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCT-TGGGAAATCGCATCAT
* * * *
33678 TTCGT-TCAAATAGTTGTAATTTTATAAACAACTTTCGGTCTTTGA
386 TTGGTCT-AAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
** ** *** *
33723 ATTAAAAACTTGACAAACATTTACGG-G-TTATT-TTT-TAACTTGGGTTC-C--TAAAAGTAT-
1 ATTAAAAACTT-------ATTTA-GGTGAGAATTGTTTCTCTCTT-GGTTCTCGGCCGAACT-TC
* ** ** ** * * ***
33780 TCAAGATGATCCATTCCTTCGCACGA-TT-TTTCA-AACATTCCATGCTCGAGAAATCGT-TTCA
56 TGAACTTGA--CA-AACTT-TTACGAGTTCTTTTATAAC-TT-C-TGTTCCTTAAA--GTATTCA
** * * *** * * * * *** *** *
33841 A-TTGTTCTAAATAGATT-G-TC-ATTTTGTAACCAAC-TT--TTGGTCTTTAAATTAAAAAGTT
112 AGACGATC--CATTCCTTCGAGCAATTTT-T--CGAACATTCCATGCTCGGGAAA-T-CGCA-TC
* * ** * * * ** ** *
33899 ATTTATGT-GAGAACCGTT-TCTTTCTTGGT--TC-TCGGTTGAACTTCTGAATTTGACAAAC-T
169 ATTT-GGTCTA-AATAGTTGTCATT-TT-GTAAACAACTTTTGGTCTT-TGAA-TT-AAAAACTT
* * * *** * **
33958 -TTTA--TGAG--TTCTTT-TATAACTTTTGTTC-C--TTAAAGTATTC-AA---GACGATCCAT
227 ATTTAGGTGAGAATTGTTTCTCT--C-TTGGTTCTCGGCCGAACT-TTCGAACTTGAC-AAAC-T
* * * *** * ** * * * *
34010 TCCTT-CGAG-CCATTTTACATACAGTCCATGCTT-GGGAAATCGCA-TCATTA-GGTCTAAATA
286 T--TTACGAGTTC-TTTT--ATA-ACTTC-TG-TTCCTTAAA--GTATTCAAGACGATC-CATTC
* * * * * ** * *** * **
34070 GTT-G-TC-ATCTTGT-AAACTACTT--TTGGTCTT-TCAATTAAAAACTTATTTAGGTGAAAAT
340 CTTCGAGCAAT-TTTTCGAAC-A-TTCCAT-G-CTTGGGAAAT-CGCA-TCATTT-GGTCTAAAT
* * *** **
34128 TGTT-TCTTTCTTAGTTCTCGGCCGAACTTTTGAAC-TTGACAA
397 AGTTGTCATT-TT-G---T-AAAC-AACTTTTGGTCTTTG---A
* ** * * * * ** * * ** *
34170 ACTTTTACGAGTTCTTTTA--T-A-ACTTCGATTC-CT-TAAAGTATTTAGGATGATCCTTTCCT
1 A--TTAAAAACTT-ATTTAGGTGAGAATT-GTTTCTCTCT-TGGT-TCTCGGCCGA-AC-TT-C-
* ** * *
34229 TCAAGCAATTTTTCAAACATTCCATGCT-CGAGAAATCACATCATTTGGTCTAAATAGT-TGTCA
56 T---G-AACTTGACAAAC-TT---T--TACGAG---T----TC-TTT--TATAACT--TCTGT--
** * *** **** * * * *
34292 TTTTGTAAACTATTTTTGGTTTTCCAATTAAAAACTTATTTAGGTGAG-AATTGTTTC--TCTTT
97 TCCT-TAAAGTATTCAAGACGATCC-ATT-----C---CTT---CGAGCAATT-TTTCGAACATT
* * * * * *
34354 CGATTCTCGGCAGAACTTACGAGCCTGAAAAACATTTACGAGTTCATTCATAACTACGAT-TCCT
148 CCATGCTCGG--GAA-AT-C--G-C-----ATCATTT--G-G-TC--T-A-AA-TA-GTTGTCAT
** ** * **** * * * * *
34418 TAAAGTATTCAAGACGATCCATTCCTTTGAGCAATTTCCAGAAC--ATTCCATGCTCGAGAAATC
191 T-TTGTAAAC-A-AC-TTTTGGT-CTTT--G-AA-TT-AAAAACTTATT-TA-GGT-GAG-AATT
* * * * * * * ** *
34481 GCACAATTTGGTCTGAATAGTTGTAATTTAGTGAAC-AACTTTTGGTCTTTGAATTAAAAACTTA
242 G-----TTT-CTCT--CT--TGGT--TCTCG-G-CCGAACTTTCGAAC-TTG----ACAAAC-T-
***** * * * * *
34545 TTTA-G-GTGAGAATAGTTACTCTCTTGGTTCTAGGCTGAACTTTCGAAGTTAACAA-ACTGTTA
286 TTTACGAGTTCTTTTA-TAACT-TC-T-GTTC----CTTAA----AGTA-TT--CAAGAC-GAT-
* ** * * * * * * *
34607 CAACTT-CTTTTA-TAACTTCGGTTCCTTATAGTATTCAAGACGATCCTTCGTGCAATTTTCTG-
334 CCA-TTCCTTCGAGCAA-TT---TTTC-GA-A-CATTC----C-ATGCTT-G-GGAA--ATC-GC
* * * * * * *
34669 ACCATTCCAAGCTCAGAAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTATAAAAAACTTTT
381 ATCATT---TGGTC---TAA----AT-A-GT------------TGTCATTTTGTAAACAACTTTT
34734 GGTCTTTGA
422 GGTCTTTGA
* * * * *
34743 ATTAAAAAACTTATTTAGGTGATAATAGTTTCTCTCTAGGTTCTAGGCCGAACTT-TCGAACTTC
1 ATT-AAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTG
* * * * * * * * * *
34807 AAAAACCTTTATGAGTTCTTTTTTAACTTCGGTT-CTTGTAATTATTCAACACGATCTATACCTT
64 ACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTT-AAAGTATTCAAGACGATCCATTCCTT
* * * * *
34871 CGAGCAATTTTTCGAACATTCCATTCTCAGGAAATCGCATAAATTGTTCTAAATAGATTGTCATT
128 CGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATT
* * * *
34936 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTAAGAATTGTTTCTTTCTAGGTT
192 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTT
* * * * * *
35001 CTCGGCCGAACTTTCCAATTTGACAAACTTTAATGAGTTCTTTTATAACTTTTATTCCTTAAAGT
257 CTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGT
* * * * * * * *
35066 ATTCAAGATGATCCATTCCTCCCAGCCATTTTCCGAACAATCCATGCTCT-GGAAATTGTATCAT
322 ATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCT-TGGGAAATCGCATCAT
* *
35130 TTGGT-TCAAATAGTTGTCATTTTATAAACAACTTTTGGTATTTGA
386 TTGGTCT-AAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * ** * *
35175 ATTAAAAGCTTATTTAGGAGATAATAGTTCCAATCTAGGTTCTCGGCAGAACTT-TCGAACTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTGA
* * * * *
35239 CAAACATTTAAGAGTTCTTTGT-TGACTTC-GATTCCTTAAAGTATTCAAGATGATTCATTCCTT
65 CAAACTTTTACGAGTTCTTT-TATAACTTCTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * * * *
35302 CGCA-CAATTTTCCCAACATTCCATGCTCGGGAAATCGTATCATTTGTTCTAAATAGATTGGCAT
128 CG-AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCAT
* * * * *
35366 TTTGTAAACAGCTTTTGGTCTTTAAATTAAAAAGTTATTTATGTGAGAATTGTTTCTTTCTTGGT
191 TTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGT
* * * * * * *
35431 TCTTGGTCGAACTTCCGAACATGACAAACTTTTACGAGTTATTTTATAACTTTTATTCCTTAAAG
256 TCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAG
* * * * *
35496 CATTCAAGACAATCCATTCCTTCGAGCCA-TTTTCTGAACAGTCCATGGTTGGGAAATCGCATCA
321 TATTCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATCA
* * * *
35560 TTAT-GTCTAAATAGTTTTCATTTTGTAAACTACTTTTGGTTTTTAA
385 TT-TGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * *
35606 ATTAAAAA-TCTATTTATGTGAAAATTGTTTCTTTCTTGGTTCTCGGTCGAACTTCCGAACTTGA
1 ATTAAAAACT-TATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGA
* * * *
35670 AAAACTTTTGCGAGTTATTTTATAACTT-TGGTTCCTTAAAGTATTTAAGACGATCCATTCCTTC
65 CAAACTTTTACGAGTTCTTTTATAACTTCT-GTTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * *
35734 AAGCAATTTTTCGAACATTTCATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTT
129 GAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTT
* ** * *
35799 G-AAACAACTTTT-GTCTTTGAATTAAAAACTTATTTAGGAGAGAATAATTTCTCTCTTTGTTCA
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
* ** * * * * * *
35862 CGGTCGAACGATCGAAGTTGACAAACTTTTATGAGTTCTTTTATAACATCGGTTCCATAAATTAT
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * *
35927 TCAAGACGATCCATTCCTTCAAGCAA-TTTTCTGAACATTCTATG-TTCGGGAAATCGCATCAAT
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTT-GGGAAATCGCATCATT
* * * *
35990 TGTTCTAAATAGATTGTCATTTTATAAACAACATTCGGTCTTTGA
387 TGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * *
36035 ATTAAAAGCTTATTTAGGTGATAGTAGTTTCTCTC-----TC-C-GTCGAACTT-TCGAACTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTGA
* * * * * * *
36092 CAAACTGTTACGAATTCTTCTATAACATCAGTTCATTAAAGTATTTAAGACGATCCATTCCTTCT
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC-
* * ** * *
36157 CA-CAA-TTTTCTGAACATTCCATGCTCAGGAAATTACATCATATGGTCTAAATAGTTCTCATTT
129 GAGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTT
* * * * * *
36220 TATAAACAACTTTTGGTCTTTGAATTAAAAACATATTTAAGTGATAATAGTTCCTCTCTTGGTTC
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * * * * *
36285 TCAGCCAAACTTTCGAAGTTGAAAAAATTTTATGAGTTCTTTTTTAACTTCAGTTCCATAAAGTA
258 TCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTA
* * ** * *
36350 TTCAACACGATCCATTCCTTCAAGCAATTTTTCGAACATTCTGTGCTTGGGAAATCGCATAAATT
323 TTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTT
* *
36415 GTTCCAAATAGATTGTCATTTTGTAAACAACTTTTGGTCTTTGA
388 GGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* ** * * *
36459 A-TAAAAATATTATTTATATAAGAATTATTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGA
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGA
* * * *
36523 CAAACTTTTACAAGTTCTTTTAAAACTTTTGTTCCTTAAAGTGTTCAAGACGATCCATTCCTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * * *
36588 AGCAGTTTTTTGAACATTACATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTGATTTTT
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * * * * *
36653 TAAATAACTTTTGGTCTTTGGATTAGAAACTTATTTACGTGATAATAGTTTCTCTCTAGGTTCT-
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * * * * *
36717 GGACAGAACTTTTGAACTTCAAAAACCTTTACGAGTTCTTTTTTAACTT-TGATTCCTTAAATTA
260 GG-CCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGTA
* * * * * * * *
36781 TTCAGGACGATCTATACCTTCGAGCAGTTTTTCAAACATTCAATTCTTGGGAAATCGCATCAATT
323 TTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTT
* **
36846 GTTCTAAATAGATTGTTGTTTTGTAAACAACTTTTGGTCTTTGA
388 GGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * *
36890 AATAAAAACTTATTTATGTAAGAATTGTTTCTTTCTAGGTTCTCGGCCGAACTTTTGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
36955 AAACTTTTACGAGTTCATTTAT-AGTTTTATTCCTTAAAGTATT-AGAGAGGATCCATTCCTCCG
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCA-AGACGATCCATTCCTTCG
** * * * * ** * *
37018 AGCCGTTTTCCAAACAATCCATGCTCTGGAAATCATATCATTTCGT-TCAAATAGTTGTAATTTT
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCT-AAATAGTTGTCATTTT
* * * * * * **
37082 ATAAACAACTTTTGGTATTTGAATTAAAAACTTATTCAGGTGATAATAGTTCCTCTCTAAGTTCT
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
* * * * ** *
37147 CGGCAGAACTTTCGAACTTGACAAACATTTACGAGTTATTTTTTAACTTGGGTTCCTAAAAGTAT
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * * * ** *
37212 TCAAGATGATCCATTCCTTCGCA-CGA-TTTTCTGAACCTTCCATGCTCGGGAAATCGTTTCAAT
324 TCAAGACGATCCATTCCTTCG-AGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATCATT
* *
37275 TGTTCTAAATAGATTGTCATTTTGTAAACAAC-TTTGGTCTTTAA
387 TGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
** ** * * *
37319 ATTAAAAGGTTATTTACATGAGAATTATTTCT-TACTTGGTTCTCGGTCGAACTT-TCGAATTTG
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCT-CTTGGTTCTCGGCCGAACTTCT-GAACTTG
* * * *
37382 ACAAACTTTTACGAGTTCTTTTATAACTTTTACAAGTT-CTT-ACGTGA--GAATA-GTTACTCT
64 ACAAACTTTTACGAGTTCTTTTATAAC--TT-C-TGTTCCTTAAAGT-ATTCAAGACG--A-TC-
** * * * * * * ** ** * *
37442 C-TTGGTTCTAGGCTGCA-CTTTCGAA-GTTAACAAACTGTTAC--GACTTCTTTTATAACTTCG
120 CATTCCTTCGA-GC--AATTTTTCGAACATT--C-CA-TGCT-CGGGAAATC--GCATCA-TTTG
* * * * * ** ** *
37502 GTTCCTTACAGTA-TTCAAGACGATCCTTCG--AGCAATTTTCTGAACATTCCAAGCTCAGGAAA
174 G-T-C-TA-AATAGTT---GTC-AT--TTTGTAAACAACTTT-TGGTC-TTTGAA--TTA--AAA
* * * * * ***** * ** ** *
37564 TCGCATCATTT-GGTCTA-AATAGTTGTCAT-TTTATAAAAAAAT-TGTTGGTCTTT-GAA-TTA
223 --AC-TTATTTAGGT-GAGAATTGTT-TC-TCTCT-T--GGTTCTCGGCCGAACTTTCGAACTTG
* * * ** ** * * * *
37623 AAAAACTTATTTAGGTGATAATAGTTTCTCTT-TAGGTTCTGGGCC--GAACT-TTCGA-AC-TT
279 ACAAAC-T-TTTA--CG-----AG-TTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGAT
* ** * * * * *
37682 CAAAAACCTTTACGAGTTC-CTTTTT--AAC-TTCAATTCCTT--TAATTATTCAACACAATCTA
334 C-CATTCC-TT-CGAG--CAATTTTTCGAACATTCCA-TGCTTGGGAA--A-T---CGC-ATC-A
* ** * * *
37741 TACCTTCGAG-C-AATTTTTTGAACATTCCATTCTCAGGAA-ATCACATAAATTGGTC--T-A
385 T---TT-G-GTCTAAATAGTTG-TCATT---TTGT-A--AACA--AC-T--TTTGGTCTTTGA
* * *** * * * * ** * *** * ** * *
37798 AATAGATTGTCATTT-TGTAAACAACTT-TTGGTCT-TTGAATT-AAAGACTTATTTATGTAAGA
1 ATTAAAAACTTATTTAGGT-GAGAA-TTGTTTCTCTCTTG-GTTCTCGGCCGAACTTCTG--A-A
* *** ** ** * *
37859 ATTG--TTTCTTTCTA-G-GTTCTGGGTCGAACTT-TCGAACTTGACAAACTTTTATGAGTTCTT
60 CTTGACAAACTTT-TACGAGTTCT-TTTATAACTTCT-G---TT--C---C--TTA-AAG-T-AT
* * * * * * * **
37919 TTATA-ACTTAT--ATTCCTT--A--AAGTATTCAAGACGA-TCCATTCCTCCCGGCCATTTTC-
109 TCA-AGAC-GATCCATTCCTTCGAGCAATTTTTCGA-AC-ATTCCA-TGCT--CGG-GA-AATCG
* * * ** *
37975 CGAACAATCCATGCTCTGGA-AATTGTATCATTTGGTTCAAATAGTTGTCATTTTATAAACAACT
165 C-ATC-AT--TTGGTCTAAATAGTTG--TCA------T----T--TTG--------TAAACAACT
* * * * ** * **
38039 TTTGGTCTTTGAATTAAAAGCTTATTTAGGTGATAATAGTTCCAATCTAGGTTCTCGGTAGAACT
204 TTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACT
* * * * *
38104 TTCGAACTTGACAAACATTTAAGAGTTCTTTGT-TGACTTC-GATTCCTTAAAATATTCAAGATG
269 TTCGAACTTGACAAACTTTTACGAGTTCTTT-TATAACTTCTG-TTCCTTAAAGTATTCAAGACG
* * * * * *
38167 ATCCATTCCTTCGCA-CAATTTTCCCAACATTCCATGCTCGGGAAATCGTATAATTTGTTCTAAA
332 ATCCATTCCTTCG-AGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAA
* *
38231 TAGATTGGCATTTTGTAAACAACTTTTGGTCTTTAA
396 TAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * *
38267 ATTAAAAAGTTATTTATGTGAGAATTGTTTCTTTCTTGGTTCTCGGTCGAACTTCTGAACTTGAT
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * *
38332 AAACTTTTACGAGTTGTTTTATAACTTTTATTCCTTAAAGCATTCAAGACAATCCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
** * * * *
38397 GC-CGTTTTCTGAACAGTCCGTGCTTGGGAAATCACATCATTAT-GTCTAAATAGTTGTCATTTT
131 GCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATT-TGGTCTAAATAGTTGTCATTTT
* * *
38460 GTAAACTACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGTGAATTGTTTCTTTCTTGGTTCT
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
** * **
38525 CGATCGAACTTTCAAACTTGACAAACTTTT--TTGTTC--TT-TAA----TG-----T--A-T-T
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * *
38572 T-AAGACGATCCATTCCTTCAAGCAATTTTTCGAACATTCCATGCTCGAGAAATCGCATCATTTG
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTG
*
38636 GTCTAAATAGTTG-CAATTTGTAAACAACTTTT-GTCTTTGA
389 GTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* ** * * * ** *
38676 ATTAAAAACTTATTTAGGAGAGAATAATTTCTCTCTTTGTTCACGGTCGAACTTCCAAAGTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * *
38741 AAACTTTTATGAGTTCTTTTATAACATCGGTTCCATAAATTATTCAAGACGATCCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * *
38806 GCAA-TTTTCTGAACATTCCATGTTCGGGAAATCACATCAATTGTTCTAAATAGATTGTCATTTT
131 GCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTTT
* * * * * *
38870 ATAAACAACATTTGGTCTTTGAATTAAAAACTTATATAGGTGATAGTAGTTTCTCTCTTGGTTCT
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
* * * * * *
38935 CGGCCAAACTTCCGAAGTTGACAAACTTTTATGAGTTCTTTTTTAACTTCGGTTCCTTAAAGTAT
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* *
39000 TCAAGACGATCCATTCCTTCGTGCAATTTTTCGAACATTCCATG-TTCGGGAAATCGCATCAATT
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTT-GGGAAATCGCATCATTT
* * * * * *
39064 GTTCTAAATAGATTGTCTTTTTGTAAAAAAAACTTATGTTCTTTAA
388 GGTCTAAATAG-TTGTCATTTTGT--AAACAACTTTTGGTCTTTGA
* * * * *
39110 ATTAAAATA-TTATTTATGAGAGAATTGTTT-TTTCTTTGTTCTCGGTCGAACTT-TCGAACTTG
1 ATTAAAA-ACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTG
* * * * *** * *
39172 ACAAACTGTTACGAATTCTTCTATAACATCAAATCATTAAAGTATTTAAGACGATCCATTCCTTC
64 ACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * * *** * *
39237 GCA-CAATTTTCCGAACATTCCATGCTCAGGAATTTAAATCATATGGTCTAAATAGTTCTCATTT
129 G-AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTT
* * * * ** * * *
39301 TATAAACAAATTTTGGTCTTTGAATTAAAAACATATTTAAGTGTTAGTAGTTCCTCTCTTGGTTC
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * * *
39366 TCAGCCAAACTTTCGAAGTTGACAAAATTTTACGAGTTCTTTTTTAACTTCAGTTCCATAAAGTA
258 TCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTA
* * *** * *
39431 TTCAACACGATCCATTCCTTCAAGCAATTTTTCGAACATTTTGTGCTTGGGAAATCGCATAAATT
323 TTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTT
* * * *
39496 GTTCCAAATAGATTGTCATTTCGTAAACAACTTTTGGCCTTTGA
388 GGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * *
39540 A-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGA
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGA
* * * * * *
39604 CAAACTTTAACGAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAGGAAGATCCATTCTTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * * * *
39669 AGCAA-TTTCCCATACAGTCCATGCTTGGGAGATCACATCATTAGGTCTAAATAGTTGTCATTTT
130 AGCAATTTTTCGA-ACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTT
* *
39733 TTAAACTACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCT-TTCGGTTC
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTT-GGTTC
* * * * *
39797 TCGGTCGAACTTCCGAACTAGAAAAACTTTTACGAGTTCTTTTATAACTT-TGATTCCTTAAACT
258 TCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGT
* * ** * *
39861 ATTCAAGATGATCCCTTCCTTCGAGCAATTTTAAGAGCATTCCATGCTCT-AGAAATCGCATCAT
322 ATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCT-TGGGAAATCGCATCAT
* * * * *
39925 TTAGTCTGAATAGTTGCCATTATGTATACAACTTTTGGTCTTTGA
386 TTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * *
39970 ATTAAAAACTTATTTAGGTGAGAATAGTTTTTCTCTTGGTTCTAGGCCGAACATCCGAAGTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * *
40035 AAACTTTTACGAGTTCTTTTATAAGTTCGGTTCCTTAAAGTATTCAAGACAAACCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* ** * *
40100 GCAA-TTTTCTGAACATTCCAAGCTTAGGAAATCTCATCATTTGGTCTAAATAGTTGTCGTTTTG
131 GCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * *
40164 TAAACAACTTTTGGTCTTT-ATATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCTTGGTTCT
195 TAAACAACTTTTGGTCTTTGA-ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
* * * * * *
40228 CGGTCGATC-TTCAAACTTGACAAACTTTTACAAGTTCTTTTATAACTTTTGTTCATTAAAGTAT
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * * *
40292 TCAAGACGATCCATTCCTTCGAGCAA-TTTTCTGAACAGTCCATGCTTGGAAAATCACATCATTA
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATCATTT
*
40356 GGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTTTTTGA
388 GGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * *
40399 ATTAAAAACTTATTTAGGTGAGAATTATTTCTCTCTTGGTTCTCGACCAAACTTCCGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * *
40464 TAACTTTTAAGAGTTCTTTTATAACTTCGGTTCCTTAAAGTAATCAAGACGATCCATTCCTTCAA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* ** *
40529 GCAATTTTTTGAACATTCCATGCTCTAGAAATCGCATCATTTGGTCTAAATAGTTGTTATTTTGT
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
** *
40594 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAATTTCTCTCTTGGTTCTGG
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCG
* *
40659 GCCGAACTGTCGAAGTTGACAAACTTTTACGAGTTCTTTTATAACTT-TGATTCCTTAAAGTATT
261 GCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGTATT
* * * * * *
40723 TAAGACGAGCCATTCCTTCGAGGAATTTTTCGAACATTTCGTGCTT-GGAAATCGTATCATTTGG
325 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGG
*
40787 TCTAAATAGTTGTCATTTTGTAAATAACTTTTGGTCTTTGA
390 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * *
40828 ATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCATGGTTCTCGACC-AATCTT-TAAACTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAA-CTTCTGAACTTGA
* * * * * * *
40891 CAAA-ATTTCCAAGTTCTTTTATAAATT-TTTTCATTATAGTATTCAAGACGATCCATTCCTTC-
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * * * * *
40953 AGCAATTTATT-GTACAGTCCATGCTTGGGAAATCACATTATTAGGTCTAAATTGTTGTCATTCT
130 AGCAATTT-TTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTT
* * * * * * *
41017 GTAAACTACTTTTGTTTTTTCAATT-AAAACTTATTAAGGTGAGAATTGTTTCTCTATTGGTTCA
194 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCT
* ** * * * * *
41081 CAGTTGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTTTAACTTTTGTTCCTTATAGAAT
259 CGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * ** * *
41146 TCAAGACTATCCATTCCTTCGAGCAATTCTTT--AACAATTCCATGCTCGGGAAATCAAATTAAT
324 TCAAGACGATCCATTCCTTCGAGCAATT-TTTCGAAC-ATTCCATGCTTGGGAAATCGCATCATT
* * *
41209 TGTTTTAAATA----T-A--TTGT---C-A-TTTT-G-----AA
387 TGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * * * * ** ** * *
41235 AAT-AGAAGTTATTTATGTTAGAATTATTTCTTTCTTTGTTCTATGTTGTACTT-TCGAACTTGT
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCT-GAACTTGA
* * * * * *
41298 CAAGCTTTAACAAGTTCTTTTATAACTTTTGTTCGTTAAAGTATTCAAGACGATCCATTCATTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * * *
41363 AGCAA-TTTTCCATACAGTCAATGCAT-GGGAAATCACATCACTAGGTCTAAATAGTTGTCATTT
130 AGCAATTTTTCGA-ACATTCCATGC-TCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTT
* * * *
41426 TTTAAACTACTTTTTGTCTTTGAATTAAGAACTTATTTAGGTGAGAATTGTTTCTCT-TTCGGTT
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTT-GGTT
**** * *
41490 CTCGATATAACTTTCGAACTTGAAAAACTTTTACGAGTTCTTTTATAACTT-TGATTCCTTAAAC
257 CTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAG
* * ** * * *
41554 TATTCAAGATGATCCCTTCCTTCGAGCAATTTTAAGAGCATTCCATGCTCT-AGAAATCGCTTCA
321 TATTCAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCT-TGGGAAATCGCATCA
* * * *
41618 TTTAGTCTGAATAGTTGTCATTATGTATACAACTTTTGGTCTTTGA
385 TTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * *
41664 ATTAAAAACTTATTTAGGTGAGAATAGTTTTTCTCTTGGTTCTAGGCCGAACATCCGAAGTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
41729 AAACTTTTACGAGTTCTTTTACAACTTCGGCTCCTTAAAGTATCCAAGACAAACCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* ** *
41794 GCAA-TTTTCTGAACATTCCAAGCT-TAGAAATCTCATCATTTGGTCTAAATAGTTGTCATTTTG
131 GCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* ** *
41857 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTAAGAATAATTTCTCTCTTGGTTCTG
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * *
41922 GGCCGAACTGTCGAAGTTGACAAACTTTTAACGAGTTCTTTTATAACTTTTGTTCATTAAAGTAT
260 GGCCGAACTTTCGAACTTGACAAACTTTT-ACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTAT
* * * * * * * * *
41987 TCAGGACAATCCATTCTTTCGAGCAA-TTTCCCATACAGTCCATGCTTGGGAGATCACATCATTA
324 TCAAGACGATCCATTCCTTCGAGCAATTTTTCGA-ACATTCCATGCTTGGGAAATCGCATCATTT
* * *
42051 GATCTAAATAGTTGTCATTTTTTAAACTACTTTTGGTCTTTGA
388 GGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * *
42094 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTCTCGGTCGAACTTCCGAACTTGAA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * *
42159 AAACTTTTACGAGTTCTTTTATAACTT-TGATTCCTTAAACTATTCAAGATGATCCCTTCCTTCG
66 AAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
** * ** * * * *
42223 AGCAATTTTAAGAGCATTCCATGCTCTAGAAATCGCATCATTTAGTCTGAATAGTTGCCATTATG
130 AGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* * * * *
42288 TATACAACTTTTGGTCTTTGAATTAAATACTTATTTAGGTGAGAATAGTTTTTCTCTTGGTTCTA
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * *
42353 GGCCGAACATCCGAAGTTGACAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATT
* * * * * * *
42418 CAAGACAAACCATTCCTTCGAGCAA-TTTTCTGTACATTCCAAGCTTAGGAAATCTCATAATTTG
325 CAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTTGGGAAATCGCATCATTTG
*
42482 GTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTAA
389 GTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * * *
42524 ATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCTTGGTTCTCGGTCGAACTT-TAAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * *
42588 AAACTTTTACAAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAAGACGATCCATTCCTTCGA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * *
42653 GCAA-TTTTCTGAACAGTCCATGCTTGGAAAATCACATCATTAGGTCTAAATAGTTGTCATTTTG
131 GCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTG
* *
42717 TAAACAACTTTTGGTTTTTGAATTAAAAACTTATTTAGGTGAGAATTATTTCTCTCTTGGTTCTC
195 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTC
* * * * * * *
42782 GACCAAACTTCCGAACTTGACTAACTTTTAAGAGTTCTTTTATAACTTCGGTTCCTTAAAGTAAT
260 GGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATT
* * *
42847 CAAGACGATCCATTCCTTCAAGCAATTTTTTGAACATTCCATGCTCT-AGAAATCGCATCATTTG
325 CAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCT-TGGGAAATCGCATCATTTG
*
42911 GTCTAAATAGTTGTTATTTTGTAAACAACTTTTGGTCTTTGA
389 GTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* * * * *
42953 ATTAAAAACTTATTTAGGTGAG-ATTAATTTCACTCTTGGTTCTGGGCCAAACATTC-GAAGTTG
1 ATTAAAAACTTATTTAGGTGAGAATT-GTTTCTCTCTTGGTTCTCGGCCGAAC-TTCTGAACTTG
* *
43016 ACAAACTTTTACGAGTTCTTTTATAACTT-TGGTTCCTTAAAGTATTTAAGACGATCCATTCCTC
64 ACAAACTTTTACGAGTTCTTTTATAACTTCT-GTTCCTTAAAGTATTCAAGACGATCCATTCCTT
* * *
43080 CGAGCAATTTTTCGAACATTCCATGCT-TGGAAATCGTATCATTTGGTCTAAATTGTTGTCATTT
128 CGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTT
* * * * *
43144 TGTAAACAACTTTTGGTCTTTGAATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCATGGTTC
193 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * * * * *
43209 TCGACC-AATCTTT-AAACTTGACAAA-ATTTCCAAGTTCTTTTATAAATT-TTTTCATTATAGT
258 TCGGCCGAA-CTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGT
* * * *
43270 ATTCAAGACGATCCATTCCTTC-AGCAATTTATT-GTACAGTCCATGCTTGGGAAATCACATTAT
322 ATTCAAGACGATCCATTCCTTCGAGCAATTT-TTCGAACATTCCATGCTTGGGAAATCGCATCAT
* * * * * * * * *
43333 TAGGTCTAAATTGTTGTTATTCTGTAAGCTACATTTGGTTTTTCA
386 TTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
* ** * * *
43378 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTATTGGTTCTTAGTCAAACTTCCGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
* * * * * *
43443 AAACTTTTACGAGTTCTTTTTTAACTTTTGTACCTTATAGAATTCAAGACGATCCATTCCTTCAA
66 AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
** * * *
43508 GCAATTTTTTAAACATTCCATGCTCAGGAAATCGCATCACTTGTTCTAAATA---G--A---T-T
131 GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
* ** * * * * * **
43564 -ATC-A--TTTGG----T-AAAAAAAAAGTTTTTTATGTTAGAATTGTTTCTTTCTTTTTTCTCG
196 AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCG
** * * *
43620 GTTGAACTTCCGAACTTGACAAACTTTAACGAGTTCTTTTATAACTTTTGTTCAC-TAAAGTATT
261 GCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTC-CTTAAAGTATT
* * * * * * *
43684 CAGGACGATCCATT-CTTCGAGCAA-TTTCCCATACAGTCCATGCTTGGGAGATCACATCATTAG
325 CAAGACGATCCATTCCTTCGAGCAATTTTTCGA-ACATTCCATGCTTGGGAAATCGCATCATTTG
* * *
43747 GTCTAAATAGTTGTCATTTTTTAAACTACTTTTGGTTTTTGA
389 GTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
*** *
43789 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCT-TTCGGTTCTCGGTATAACTT-TCAAACTTG
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTT-GGTTCTCGGCCGAACTTCT-GAACTTG
* * * *
43852 AAAAACTTTTACGAGTTCTTTTATAACTT-TGATTCCTTAAACTATTCAAGATGATCCCTTCCTT
64 ACAAACTTTTACGAGTTCTTTTATAACTTCTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTT
43916 CGAGCAATTTT
128 CGAGCAATTTT
43927 AAG
Statistics
Matches: 20004, Mismatches: 3886, Indels: 2425
0.76 0.15 0.09
Matches are distributed among these distances:
394 1 0.00
395 8 0.00
396 48 0.00
397 23 0.00
398 85 0.00
399 6 0.00
400 4 0.00
401 4 0.00
402 5 0.00
403 11 0.00
404 46 0.00
405 7 0.00
406 36 0.00
407 31 0.00
408 220 0.01
409 493 0.02
410 1098 0.05
411 529 0.03
412 351 0.02
413 389 0.02
414 60 0.00
415 286 0.01
416 37 0.00
417 41 0.00
418 52 0.00
419 33 0.00
420 18 0.00
421 27 0.00
422 132 0.01
423 34 0.00
424 426 0.02
425 527 0.03
426 721 0.04
427 584 0.03
428 828 0.04
429 2498 0.12
430 3874 0.19
431 3720 0.19
432 586 0.03
433 250 0.01
434 74 0.00
435 41 0.00
436 51 0.00
437 47 0.00
438 16 0.00
439 119 0.01
440 111 0.01
441 11 0.00
442 7 0.00
443 9 0.00
444 9 0.00
445 11 0.00
446 4 0.00
447 12 0.00
448 2 0.00
449 13 0.00
450 3 0.00
451 9 0.00
452 5 0.00
453 14 0.00
454 13 0.00
455 269 0.01
456 61 0.00
457 83 0.00
458 18 0.00
459 10 0.00
460 19 0.00
461 12 0.00
462 15 0.00
463 6 0.00
464 4 0.00
465 19 0.00
466 17 0.00
467 14 0.00
468 20 0.00
469 33 0.00
470 25 0.00
471 17 0.00
472 9 0.00
473 4 0.00
474 5 0.00
475 8 0.00
476 11 0.00
477 9 0.00
478 20 0.00
479 40 0.00
480 14 0.00
481 23 0.00
482 24 0.00
483 9 0.00
484 12 0.00
485 21 0.00
486 22 0.00
487 14 0.00
488 11 0.00
489 13 0.00
490 7 0.00
491 24 0.00
492 20 0.00
493 3 0.00
494 3 0.00
495 5 0.00
496 4 0.00
497 7 0.00
498 6 0.00
499 5 0.00
500 10 0.00
501 1 0.00
502 1 0.00
503 3 0.00
504 1 0.00
505 14 0.00
506 3 0.00
507 5 0.00
508 3 0.00
509 6 0.00
510 4 0.00
512 4 0.00
513 3 0.00
514 2 0.00
515 2 0.00
516 7 0.00
517 6 0.00
518 4 0.00
519 2 0.00
520 3 0.00
521 6 0.00
523 2 0.00
525 4 0.00
526 2 0.00
527 3 0.00
530 4 0.00
531 7 0.00
532 3 0.00
533 4 0.00
534 4 0.00
535 12 0.00
536 7 0.00
537 11 0.00
538 4 0.00
540 1 0.00
541 2 0.00
542 2 0.00
543 6 0.00
544 2 0.00
545 2 0.00
546 4 0.00
547 9 0.00
548 2 0.00
549 1 0.00
550 5 0.00
551 7 0.00
553 3 0.00
554 2 0.00
555 3 0.00
557 1 0.00
558 7 0.00
559 1 0.00
560 5 0.00
561 3 0.00
562 1 0.00
563 3 0.00
565 1 0.00
566 8 0.00
567 3 0.00
569 2 0.00
571 6 0.00
572 6 0.00
573 4 0.00
574 12 0.00
575 16 0.00
576 4 0.00
577 1 0.00
581 3 0.00
582 4 0.00
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.40
Consensus pattern (430 bp):
ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCTGAACTTGAC
AAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
GCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT
AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCG
GCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCTGTTCCTTAAAGTATTC
AAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTTGGGAAATCGCATCATTTGGT
CTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGA
Found at i:20201 original size:216 final size:215
Alignment explanation
Indices: 18403--20200 Score: 1722
Period size: 215 Copynumber: 8.3 Consensus size: 215
18393 TGAATAGTTT
* ** * *
18403 ATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTTAGTCGATC-TTCGGAACTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTC-GAACTTGA
* * * * *
18467 CAAACTTTTATGAGTTCTTCTATAACATT-GGTTCATTAAAGTATTTAGGACGATCCATTCCTTC
65 CAAACTTTTACGAGTTCTTTTATAAC-TTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * * * *
18531 GCA-CAA-TTTTCAGAACATTCCAT-TCTCAGGAAATTGCAT-AATACGATCTAAATAGCTGTTA
129 G-AGCAATTTTTC-GAACATTCCATGT-TCAGGAAATCGCATCAAT-TGTTCTAAATAGTTGTCA
* * *
18592 TTCTATAAAACAACATTTGGTCTTT-A
190 TTTTGT-AAACAACTTTTGGTCTTTGA
* * * * * * * * *
18618 GGTTAAAAACTTATTTAGGGGATAATAGTTCCTCTCTTAGTTCTCTGCCAAACTTTCAAACTTGA
1 -ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGA
* * * * *
18683 CAAACTTTTACGAGTTCTTTTTTAACTTTGGTTCCATGAAGTATTCAAAACGATCCATTCCTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * *
18748 AGTC-ATTTTTCGAACATTCCTTGCTT-GGGAAATTGCATAAATTGCTCTAAATAGATTGTCATT
130 AG-CAATTTTTCGAACATTCCATG-TTCAGGAAATCGCATCAATTGTTCTAAATAG-TTGTCATT
18811 TTGTAAACAACTTTTGGTCTTTGA
192 TTGTAAACAACTTTTGGTCTTTGA
* * * *** * *
18835 A-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTAGGTTCTCAATCGAACCTCCGAACTTGA
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGA
* * * *
18899 CAAACTTTTACGAGTTCTTTTATAACTTCAGTTACTTAAAATATTCAAGACGATCCATTCCTCCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * ** * * ** * **
18964 AGCCA-TTTTCTGAACAATCCATGCCCTGAAAATCATATCATTTCGTTC-AAATAGTTGAAATTT
130 AGCAATTTTTC-GAACATTCCATGTTCAGGAAATCGCATCAATT-GTTCTAAATAGTTGTCATTT
*
19027 TATAAACAACTTTTGGTCTTTGA
193 TGTAAACAACTTTTGGTCTTTGA
* * * * * * * * *
19050 ATTAAAAACTTATTTAGGTGATAATAGTTCCCCTCTAGGTTCTCGACAGAACTTCCAAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGAC
* * * * * * *
19115 AAA-TATTTACGAGTTCTTTTTTAACTTCTGTTCGTTAAAGTACTCAAAATGATACATTCCTTCG
66 AAACT-TTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * *
19179 TA-CAATTTTTCGAACATTCCATGCTT-GGGAAATCGTATCAATTGTTCTAAATAGATTGTCAGT
130 -AGCAATTTTTCGAACATTCCATG-TTCAGGAAATCGCATCAATTGTTCTAAATAG-TTGTCATT
*
19242 TTGTAAACAACTTTTGGTCTTTAA
192 TTGTAAACAACTTTTGGTCTTTGA
* * * * *
19266 ATTAAAAAGTTATTTACGTGAGAATTGTTTCTTTCTTGGTTCTCGGTCGAA-TTTCCGAATTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTT-CGAACTTGA
** * *
19330 CAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTATAGTATTCAAGACGATCCATTTCTTCG
65 CAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * * * * *
19395 AGCCATTTTACGTACAGTCCATGCTT-GGGAAATAGCATC-ATTAGGTCTAAATAGTTGTCATCT
130 AGCAATTTTTCGAACATTCCATG-TTCAGGAAATCGCATCAATT-GTTCTAAATAGTTGTCATTT
*
19458 TGTAAACTACTTTTGGTCTTTGA
193 TGTAAACAACTTTTGGTCTTTGA
* * *
19481 ATTAAAAACTTATTAAGGTGAGAATTGTTTCTTTCTTAGTTCTCGGCCGAACTTTCGAACTTGAC
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGAC
* * * * * *
19546 AAACTTTTACGAGTTCTTTTATAACTTCCGTTCCTTAAAGTATTTAAGATGATCCACTCTTTCAA
66 AAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * * * * *
19611 GCAATTTTTTGAACCA-TCCATGCT-GGAGAAATCGCATCATTTGGTCTTAATAATTGCCATTTT
131 GCAATTTTTCGAA-CATTCCATGTTCAG-GAAATCGCATCAATTGTTCTAAATAGTTGTCATTTT
*
19674 GTAAACTACTTTTGGTCTTTGA
194 GTAAACAACTTTTGGTCTTTGA
** * * * * *
19696 ATTAAAAACTTATTTAGGTGAGAATAATTTCCCTCTTGGTTCACAGCCGAAC-ATCTGAAGTTGA
1 ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTC-GAACTTGA
* * * * *
19760 CAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCATAAATTATTCAAGACAATCCATTGCTTTG
65 CAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * *
19825 AGCAATTTTTTGAACATTCGATGCTCAAGAAATCGCATCATTTGGTT-TAAATAGTTGTCATTTT
130 AGCAATTTTTCGAACATTCCATGTTCAGGAAATCGCATCAATT-GTTCTAAATAGTTGTCATTTT
* * * *
19889 ATAAAGAACATTTGTTCTTTGA
194 GTAAACAACTTTTGGTCTTTGA
* *
19911 ATTAAAAACTTATTTAGGTG-GTAATAGTTTCTCTCTTGGTTCTCGGCCGAAC-TTCTGAAGTTG
1 ATTAAAAACTTATTTAGGTGAG-AATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTC-GAACTTG
* * * * * *
19974 ACAAACTTTTATGAGTTATTTTTTAACTTCGGTTCCTTAAAGTATTGAATACGATCCATTCCTTA
64 ACAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC
* * ** *
20039 GTGTAATTACTCGAACATTCCATGTTCAGGAAATTGCATCAATTGTTCTAAATAGATTGTCATTT
129 GAGCAATTTTTCGAACATTCCATGTTCAGGAAATCGCATCAATTGTTCTAAATAG-TTGTCATTT
* *
20104 TGTAAA-AAGCTTTTGTTCTTTAA
193 TGTAAACAA-CTTTTGGTCTTTGA
* * * * *
20127 ATTAAAAAGC-TATTTATGTGAGAATTGTTTCTTTCTTGGTTCTTGGTCAAACTTTCGAACTTGA
1 ATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGA
20191 CAAACTTTTA
65 CAAACTTTTA
20201 TTCCATAAAT
Statistics
Matches: 1310, Mismatches: 231, Indels: 82
0.81 0.14 0.05
Matches are distributed among these distances:
214 16 0.01
215 710 0.54
216 552 0.42
217 31 0.02
218 1 0.00
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.39
Consensus pattern (215 bp):
ATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGAC
AAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
GCAATTTTTCGAACATTCCATGTTCAGGAAATCGCATCAATTGTTCTAAATAGTTGTCATTTTGT
AAACAACTTTTGGTCTTTGA
Found at i:20582 original size:215 final size:214
Alignment explanation
Indices: 20201--26288 Score: 5005
Period size: 215 Copynumber: 28.4 Consensus size: 214
20191 CAAACTTTTA
* * * * *
20201 TTCCATAAATTATTCAAGACGATCCATTTCTTCAAGCAATTTTCTGAACATTCCATGCTTGGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * * *
20266 ATC-CAGTCTTTTGGTCTAAATATTTGTCATTTTGTAAACAACTTTTGGTCTTTAAATTTAAAAG
66 ATCGCA-TCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
** * * * *
20330 TTATTTATATGAGAATTATTTCTTTCTTGGTTCTCGGTCGAACATCCGAACTTGACAAACTTTTA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
*
20395 CGAGTTCATTTATAACATTTG
195 CGAGTTCTTTTATAAC-TTTG
* * * * *
20416 TTCCTTAAAGTATTCAAGACTATCCATTCCTTCGAGCCATTTTCCGTACAGTCTATGCTTGGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * *
20481 ATTGCATCATTAGATCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTCAATTAAAAACT
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
* * * *
20546 TATTTAGGTG-GTAATAGTTTCTCTCTTGGTTCTCGGTCAAACTTCCGAAGTTGACAAACTTTTA
131 TATTTAGGTGAG-AATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
* *
20610 TGAGTTCTTTTTTAACTTTTG
195 CGAGTTCTTTTATAAC-TTTG
* * * * *
20631 CTCCTTAAAGTATTGAAGACGATCCATTCCTTCGTGCAA-TTACTCAAACATTCCATG-TTCGGG
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTC-CGAACATTCCATGCTT-GGG
* * * * * * *
20694 AAATTGCATCAATTGTTCTAAATAGATTGTCATTTTGTAAA-ACCTTTTGTTCTTTAAATTAAAT
64 AAATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAA
* * * ** ** *
20758 AGTTATTTATGTGAGAATTGTTTCTTTCTTGGTTCTTAGTTGAACTTTCGAACTTGACAAACTTT
128 ACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTT
*
20823 TACGAGTTCATTTATAACTTTTG
193 TACGAGTTCTTTTATAAC-TTTG
* * * * * *
20846 TTCCTTAAAGTATTCAAGACTATCCATTCCTTCGAGCCATTTTCCGTAGAGTCTATGCTTGGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * *
20911 ATTGCATCATTAGATCTAAATAGTTGTCATTTTATAAACAACTTTTGGTCTTTGAATTAAAAACT
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
** * *
20976 TATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGATCGAACTTTCAAACTTGACAAACTTTTAC
131 TATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTAC
* *
21041 AAGTTCTTTTATAACTTCGG
196 GAGTTCTTTTATAACTT-TG
* * * * *
21061 TTCCTTACAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTCAAACATTCCATGCTCGAGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* *
21126 ATCACATCATTTGGTCTAAACAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
* * * * * * * *
21191 TATTTTGGTGAGAATAGTTCCTCTCTTGGTTCACGCCCAAAC-TCTCAAAGTTGACAAACTTTTA
131 TATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTC-CGAACTTGACAAACTTTTA
* *
21255 CAAGTTCTTTTATAACTTCG
195 CGAGTTCTTTTATAACTTTG
* * * * **
21275 ATTCCTTAAAGTATTCAAGATGATCCATTCCTTCGAGCAATTCTCAGAACATTCCAAGCTCAGGA
1 -TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGA
* * * * *
21340 AATTGAATCACTTGGTCTAAATAGTTGTCATTTTATAAACAACTTTTGATCTTTGAATTAAAAAC
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * * * *
21405 TTATTTAGGTGATAATAGTTTCTCTATTGGTTCTCAGCCGACCTTCCGAACTTGACAAACTTTTA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
* *
21470 CGAGTACTTTTTTAACTTTTG
195 CGAGTTCTTTTATAAC-TTTG
* * * ** * *
21491 TTCCTGAAAGAATTCAAGATGATCCATTCCTTCGAGCAATTTTTTGAACATTCCATTCTCGGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * *
21556 ATCGCATCAATTGTTCTAAATAGATTGTCATTTTGT----AA-------------AA--AAAAAG
66 ATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * * * * * *
21602 TTATTTATGTGAGAATTGTTTCTTTCTTTGTTCTCGGTCGAACTTCTGAACTTGAAAAACTTTAA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
21667 CGAGTTCTTTTATAACTTTTG
195 CGAGTTCTTTTATAAC-TTTG
* * * *
21688 TTCATTAAAGTATTCAAGATGATCCATTCTTTCGAGCAATTTTCC-ATACAGTCCATGCTTGGGA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGA-ACATTCCATGCTTGGGA
* * * * * * *
21752 ATTCACATCATTAGGTCTAAATTGTTGTTATTTTTTTAAACTACTTTTGGTCTTTGAATTAAAAA
65 AATCGCATCATTTGGTCTAAATAGTTGTCA-TTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA
* ** * *
21817 CTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTCTCGATCAAACTTCCGAACTTGAAAAACTTTT
129 CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTT
*
21882 ACGAGTTCTTTTATAACTTCTA
194 ACGAGTTCTTTTATAACTT-TG
* ** * ** ** * *
21904 TTCCTTAAACTATTCAAGAATATCCATTCGTTTTAGCAATTTTAAGAATATTCCATGCTCT-AGA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCT-TGGGA
* * * *
21968 AATCACATCATTTAGTCTAAATAGTTGCCATTATGTAAACAACTTTTGGTCTTTGAATTAAAAAC
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * * * * *
22033 TTATTTAGGTGA-AATAGTTTCTCTCCTGGATCTAGGCCGAACTTCCGAAGTTAACAAACTTTT-
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
22096 CTGAGTTCTTTTATAACTTTGG
195 C-GAGTTCTTTTATAACTTT-G
* * * * * * *
22118 TTCTTTAAAGTATTCAAGACGAACCATTCCTTCAAGCAATTTTCTGAACATTCCAAGCTTAGCAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * * * * ** * * **
22183 TTTTCAAACATTCTATACTTGG--GAAATCGCATG-AATTGTACTAAATAGA-TTGTCAT-TTTG
66 --ATC--GCA-TC-AT--TTGGTCTAAATAG-TTGTCATT-TTGTAAACA-ACTTTTGGTCTTTG
* * * * * * * * * *
22243 ---TAAACAACTTTTGGTGTTTGAATAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTGGTT
120 AATTAAA-AAC--TT-AT-TTAG-GTGAGAA--TTGTTTCTCT----CTTG-GT-TCTC--GG--
** ** *
22305 CTCGGCCGAACCTCCGAACTTGACAAACTTTTACGAGTTCTTTTAAAACTTTTG
167 C-CGAAC-TTC---CGAACTTGACAAACTTTTACGAGTTCTTTTATAAC-TTTG
* * * *
22359 TTCCTTAAAGTATTCAAGATGATCCATTCCTTCGAGCAGTTTTTCGAACATTACATGCTTGGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * *
22424 ATCGTATCATTTGGTCTAAATAGTTGTGATTTTGTAAACAAATTTTGGTCTTTGAATTAAAAAAT
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
* * **
22489 TATTTATGTGAGAATTGTTTCTTTCTTGGTTCTCGGCCGAACTT-TAAACTTGACAAACTTTTTT
131 TATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAAC--TTTT
*
22553 ACAAGTTCTTTTATAACTTTTG
194 ACGAGTTCTTTTATAAC-TTTG
* * * * *
22575 TTCATTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGTACAGTCCATGCTTGGAAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * * * *
22640 ATCACATCATTAGCTCTAAATAGTTGTCATTTTGTAAACTACTTTTGGT-TTTCCAATTATAAAC
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTT-GAATTAAAAAC
* * * * * * * *
22704 TTATTTAGGTGAGAATTGTTTCTCTTTTAGTTCTCGGCAGAATTTACGAACCTGAAAAACCTTTA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
* * **
22769 CGAGTTCATTCATAACTACG
195 CGAGTTCTTTTATAACTTTG
* * * * *
22789 ATTCCTTAAAGTATTCAGGACGATCCATTCCTTTGAGCAATTTCCCGAACATTCCATGCTCGAGA
1 -TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGA
* * *
22854 AATCGCA-CAATTTGGTCTGAATAGTTGTAATTTTGTGAACAACTTTTGGTCTTTGAATTAAAAA
65 AATCGCATC-ATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA
* * * * * * * * *
22918 CTTATTTACGTGAGAATAGTTACTCTCTTGGTTCTAGGCTGAACTTTCAAAGTTAACAAACTTTT
129 CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTT
* *
22983 ACGACTTCTTTTATAACTTCGG
194 ACGAGTTCTTTTATAACTT-TG
* * * **
23005 TTCCTTAAATTATTCAAGACG----A-TCC-TCGAGCAATTTTCTGAACATTCCAAGCTCAGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* *
23064 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTATAAAAAACTTTTGGTCTTTGAATTAAAAAAC
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATT-AAAAAC
* * * * * * * * *
23129 TTATTTAGGTGATAATAGTTTCTCTCTAGGTTCTGGGCCGAACTTTCGAACATCAAAAACCTTTA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
* * *
23194 CGAGTTCTTTTTTAACATCG
195 CGAGTTCTTTTATAACTTTG
* * * * * * * * * **
23214 ATTCCTTTAATTATTCAACACGATCTATACCTTTGAGCAATTTTTCGAACGTTCCATTCTCAGGA
1 -TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGA
* * * * *
23279 AATCGCATAAATTGTTCTAAATAGATTTTTATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA
65 AATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA
* * * * * *
23344 CTTATTTACGTAAGAATTGTTTCTTTCTAGGTTCTTGGCCGAACTTCTGAACTTGACAAACTTTT
129 CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTT
* *
23409 ATGAGTTCTTTTATAACTTTTA
194 ACGAGTTCTTTTATAAC-TTTG
* * * * *
23431 TTCCTTAAAGTATTCAAGACGATCCATTCCTCCCAGCCATTTTCCGAACAATCCGTGGAC-T-GG
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCAT-G-CTTGGG
* ** * *
23494 AAATTGTGTCATTTGGT-TCAAATAGTTGTCATTATATAAACAACTTTTGGTCTTTGAATTAAAA
64 AAATCGCATCATTTGGTCT-AAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAA
* * ** ** * * *
23558 ACTTATTTAGGTGATAATAG-TT-AATCTAAGTTCTCGGCAGAACTTTCGAACTTGACAAAC-AT
128 ACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTT
* *
23620 TAAGAGTTCTTTGT-TGACTTTG
193 TACGAGTTCTTT-TATAACTTTG
* * * * * * **
23642 ATTCCTTAAAGTATTCAAGATGATCTAGTCCTTCGCA-CAATTCTCCCAACATTCCATTCTCAGG
1 -TTCCTTAAAGTATTCAAGACGATCCATTCCTTCG-AGCAATTTTCCGAACATTCCATGCTTGGG
* * * *
23706 AAATCGTATCATTTGTTCTAAATAGATTGACATTTTGTAAACAACTTTTGGTCTTTAAATT-AAA
64 AAATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAA
* * * ** * * *
23770 AGTTATTTATGTGAGAATTGTTTCTTTCTTGGTTCTCGGTTGTACTTCCAAACTTGACTAACTTT
128 ACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTT
* *
23835 TACGAGTTTTTTTATAACTTTA
193 TACGAGTTCTTTTATAACTTTG
* * * ** *
23857 TTCCTTAAAGCATTCAAGACAATCCATTCCTTCGAGCCATTTTTTGAACAGTCCATGCTTGGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
*
23922 ATCGCATCATTAT-GTCTAAATAGTTGTCATTTTGTAAACTACTTTTGGTCTTTGAATTAAAAAC
66 ATCGCATCATT-TGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * ** **
23986 TTATTTAGGTGTGAATTGTTTCTTTCTTGGTTCTCGATCGAACTTTTGAACTTGACAAACTTTTA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
*
24051 CGAGTTCTTTTATAACTTCGG
195 CGAGTTCTTTTATAACTT-TG
* * * * * * * * ***
24072 TTCCTTAAAATATTTAAGACGATCGATTCCTTCAAGAAATTTTTCAAACATTCCACGCTCAAGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * *
24137 ATCACATCATTTGGTCTAAATAGTTGTCATTTTATAAACAACTTTTGGTCTTTGAATTAAAAACA
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
* * * * * * * *
24202 TATTTAAGTGATAATAGTTCCTCTCTTGGTTCTCAGCCAAACTTTCGAAGTTGACAAACTTTTAC
131 TATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTAC
* *
24267 GAGTTCTTTTTTAACTTCAG
196 GAGTTCTTTTATAACTT-TG
* * * * * * *
24287 TTCCATAAAGTACTCAACACGATCCATTCCTTTGAGCAATTTTTCGAACATTCTATGCTTGGAAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * * * * *
24352 ATAGCATAAATTGTTCCAAATAGATAGTCAGTTTGTAAACAACTTTTGGTCTTTGAA-TAAAAAT
66 ATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-
* * * *
24416 GTTATTTATGTAAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCGGAACTTGACAAACTTTT
129 CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTT
*
24481 ACGAGTTCTTTTAAAACTTTTG
194 ACGAGTTCTTTTATAAC-TTTG
* *** *
24503 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGTGCAA-TTTCTCGAACATGGAATG-TTCGAG
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTC-CGAACATTCCATGCTT-GGG
* * * *** * * * *
24566 AAATTGCATCAATTGTTCTAAATAGATTGTCATTGTAAAAAAAAACTTATGTTCTTTAAATTAAA
64 AAATCGCATCATTTGGTCTAAATAG-TTGTCATT-TTGTAAACAACTTTTGGTCTTTGAATTAAA
** * * * * *
24631 ATGTTATTTATGTGGGAATTGTTT-TTTCTTTGTTCTCGGTCGAACTTCCGAACTTGACAAACTT
127 AACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAAC-T
* * ** * **
24695 TTGTTCCA-TAAAGTATTCA-AGACTATCCA
191 TT-TACGAGT--TCT-TTTATA-ACT-T-TG
* * * * * * * *
24724 TTCCTTCGAGCAATTTTTCGA-AC-ATTCAATGCTT-GAG-AA--AT-CGAATCATT---TGGTC
1 TTCCTT--A--AAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAA-CATTCCATGCT-
* * * * * *
24779 T--AAATATTTG--TCATTT--TGTAAACAACTTTGGGTC--TTTGAATTAAA-AAC---T--TA
60 TGGGAA-A-TCGCATCATTTGGTCTAAA-TA-GTT--GTCATTTTG---TAAACAACTTTTGGTC
** * * * *** * ** * ** * * *
24830 TTT-AGGTGAGAA--TAGTTT--CT--CTCTTGGTTCTC-AGTCGAACT--TCCGAACTTGACAA
116 TTTGAATTAAAAACTTA-TTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTT-CCGA
* * * *
24885 ACTT-------T--TGCGAATTCTTCTATAA-TATCAG
179 ACTTGACAAACTTTTACGAGTTCTTTTATAACT-T-TG
** * * * * **
24913 TTCAATAAAGTATTTAAGACGATCAATTCCTTCGCA-CAATTTTTCGAACATTCTATGCTCAGGA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCG-AGCAATTTTCCGAACATTCCATGCTTGGGA
* * * *
24977 AATTGCATCATATGGTCTAAATAGTTGTCATTTTATAAACAACTTTTGGTGTTTGAATTAAAAAC
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * * * * * * * * *
25042 ATATTTAAGTGATAATAGTTCCTCTCTTGGTTCCCAGCCAAACTTTCGAAGTTGACAAACTTTTA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
* *
25107 CGAGTTCTTTTTTAACTTCAG
195 CGAGTTCTTTTATAACTT-TG
* * * * * * *
25128 TTCCATAAAGTACTCAACACGATCCATTCCTTTGAGCAATTTTTCGAACATTCTATGCTTGGAAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * * * * * *
25193 ATAGCATAAATTGTTCCAAATAGATAGTCAGTTTGTAAACAACATTTGGTCTTTGAA-TAAAAAT
66 ATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-
* * * *
25257 GTTATTTATGTAAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCGGAACTTGACAAACTTTT
129 CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTT
*
25322 ACGAGTTCTTTTAAAACTTTTG
194 ACGAGTTCTTTTATAAC-TTTG
* * * * *
25344 TTCCTTAAAGTATTCAAGACGATCCATTCGTTCGAGCAGTTTTTCTAACATTACATGCTTGGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * *
25409 ATCGCATCATTTGGTCTAAATAGTTGTGATTTTGTAAACAACTTTTGGTCTTTAAATTAAAAAAT
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
* ** * * * *
25474 TCTTTATATGAGAATTGTTTCTTTCTTGGTTCTCGGTCGAACATT--AAACTTAACAAACTTTTA
131 TATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAAC-TTCCGAACTTGACAAACTTTTA
*
25537 CAAGTTCTTTTATAACTTTTG
195 CGAGTTCTTTTATAAC-TTTG
* * * * * * *
25558 TTCATTAAAGTATTCAACACGGTCCATTCCTTCAAGCAATTTT-CAAAAATTCCATACTTGGGAA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
* * * * * *
25622 ATCACATAAATTGTTCTAAATAGATTATCATTTTGTAAACAACTTTTGGTGTTTGAA-TAAAAAT
66 ATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-
* * ** *
25686 GTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGATCGAACTTTCGAACTTGACAAACTTTT
129 CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTT
* *
25751 ACGAGTTCTATTAAAACATTTG
194 ACGAGTTCTTTTATAAC-TTTG
* * * * * * *
25773 TTCCTTAGAGTATTTAAGA-TATTCATTCCTTCGAGCAATTTTTCGTACAGTT-CATACTTGGGA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACA-TTCCATGCTTGGGA
* * * * * *
25836 AATCACATCATTAGGTCTAAATAGTTGTCATTATGTAAA-TACTTTTGGTTTTTCAATTAAAAAC
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
**
25900 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGATCGAACTTCCGAACTTGACAAACTTTTA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
*
25965 CGAGTTCTTTTAAAACATTTG
195 CGAGTTCTTTTATAAC-TTTG
* * * * * * *
25986 TTCCTTAGAGTATTTAAGA-TATTCATTCCTTCGAGCAATTTTTCGTACAGTT-CATACTTGGGA
1 TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACA-TTCCATGCTTGGGA
* * * * * *
26049 AATCACATCATTAGGTCTAAATAGTTGTCATTATGTAAA-TACTTTTGGTTTTTCAATTAAAAAC
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * * * * ** *
26113 TTATTTAGGTGAGAATTGTTTCTGTTTTGGTTCTCGACCGAACTTACAAACCAGAAAAACTTTTA
130 TTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTA
* *
26178 CGAGTTCTTTCATAACTTCG
195 CGAGTTCTTTTATAACTTTG
* * * * * * * *
26198 ATTCCCTAAAGTATTCAAGACGATCCATTCATTCGAGCAATTTTTCAAACATTCAATCCTCGAGA
1 -TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGA
26263 AATCGCATCATTTGGTCTAAATAGTT
65 AATCGCATCATTTGGTCTAAATAGTT
26289 TTGGTCTTTG
Statistics
Matches: 4731, Mismatches: 920, Indels: 445
0.78 0.15 0.07
Matches are distributed among these distances:
185 6 0.00
186 2 0.00
187 8 0.00
188 1 0.00
189 11 0.00
190 3 0.00
191 7 0.00
192 11 0.00
193 10 0.00
194 4 0.00
195 13 0.00
196 8 0.00
197 158 0.03
198 4 0.00
199 7 0.00
200 3 0.00
201 3 0.00
202 8 0.00
203 6 0.00
204 15 0.00
205 4 0.00
206 6 0.00
207 9 0.00
208 3 0.00
209 84 0.02
210 102 0.02
211 4 0.00
212 106 0.02
213 467 0.10
214 564 0.12
215 1771 0.37
216 944 0.20
217 98 0.02
218 20 0.00
219 11 0.00
220 24 0.01
221 20 0.00
222 11 0.00
223 11 0.00
224 8 0.00
225 8 0.00
226 9 0.00
230 9 0.00
232 7 0.00
233 7 0.00
234 15 0.00
235 16 0.00
236 3 0.00
237 6 0.00
238 5 0.00
239 2 0.00
241 85 0.02
242 4 0.00
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.39
Consensus pattern (214 bp):
TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCCGAACATTCCATGCTTGGGAA
ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
TATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAAACTTTTAC
GAGTTCTTTTATAACTTTG
Found at i:21773 original size:197 final size:197
Alignment explanation
Indices: 21399--21773 Score: 475
Period size: 197 Copynumber: 1.9 Consensus size: 197
21389 TCTTTGAATT
* * *
21399 AAAAACTTATTTAGGTGATAATAGTTTCTCTATTGGTTCTCAGCCGACCTTCCGAACTTGACAAA
1 AAAAACTTATTTAGGTGAGAATAGTTTCTCTATTGGTTCTCAGCCGAACTTCCGAACTTGAAAAA
* * *
21464 CTTTTACGAGTACTTTTTTAACTTTTGTTCCTGAAAGAATTCAAGATGATCCATTCCTTCGAGCA
66 CTTTAACGAGTACTTTTATAACTTTTGTTCATGAAAGAATTCAAGATGATCCATTCCTTCGAGCA
** * * * *
21529 ATTTTTTGAACATTCCATTCTCGGGAAATCGCATCAATTGTTCTAAATAGATTGTCATTTTGTAA
131 ATTTTTCCAACAGTCCATGCTCGGGAAATCACATCAATTGGTCTAAATAGATTGTCATTTTGTAA
21594 AA
196 AA
* * * * * * * * *
21596 AAAAAGTTATTTATGTGAGAATTGTTTCTTTCTTTGTTCTCGGTCGAACTTCTGAACTTGAAAAA
1 AAAAACTTATTTAGGTGAGAATAGTTTCTCTATTGGTTCTCAGCCGAACTTCCGAACTTGAAAAA
* * * *
21661 CTTTAACGAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAAGATGATCCATTCTTTCGAGCA
66 CTTTAACGAGTACTTTTATAACTTTTGTTCATGAAAGAATTCAAGATGATCCATTCCTTCGAGCA
* *
21726 A-TTTTCCATACAGTCCATGCTTGGGAATTCACATC-ATTAGGTCTAAAT
131 ATTTTTCCA-ACAGTCCATGCTCGGGAAATCACATCAATT-GGTCTAAAT
21774 TGTTGTTATT
Statistics
Matches: 149, Mismatches: 27, Indels: 4
0.83 0.15 0.02
Matches are distributed among these distances:
196 8 0.05
197 141 0.95
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.39
Consensus pattern (197 bp):
AAAAACTTATTTAGGTGAGAATAGTTTCTCTATTGGTTCTCAGCCGAACTTCCGAACTTGAAAAA
CTTTAACGAGTACTTTTATAACTTTTGTTCATGAAAGAATTCAAGATGATCCATTCCTTCGAGCA
ATTTTTCCAACAGTCCATGCTCGGGAAATCACATCAATTGGTCTAAATAGATTGTCATTTTGTAA
AA
Found at i:26431 original size:196 final size:196
Alignment explanation
Indices: 26084--26484 Score: 520
Period size: 196 Copynumber: 2.0 Consensus size: 196
26074 TGTCATTATG
* * * * * *
26084 TAAATACTTTTGGTTTTTCAATTAAAAACTTATTTAGGTGAGAATTGTTTCTGTTTTGGTTCTCG
1 TAAATAGTTTTGGTCTTTCAATTAAAAACTAATTTAGGTGAGAATTGTTTCTCTCTTGCTTCTCG
26149 ACCGAACTTACAAACCAGAAAAACTTTTACGAGTTCTTTCATAACTTCGATTCCCTAAAGTATTC
66 ACCGAACTTACAAACCAGAAAAACTTTTACGAGTTCTTTCATAACTTCGATTCCCTAAAGTATTC
26214 AAGACGATCCATTCATTCGAGCAATTTT-TCAAACA-TTCAATCCTCGAGAAATCGCATCATTTG
131 AAGACGATCCATTCATTCGAGCAATTTTCT-AAACATTTC-ATCCTCGAGAAATCGCATCATTTG
26277 GTC
194 GTC
* * *
26280 TAAATAGTTTTGGTCTTTGAATTAAAAACTAATTTAGGTTAGAATTGTTTCTCTCTTGCCTT-TG
1 TAAATAGTTTTGGTCTTTCAATTAAAAACTAATTTAGGTGAGAATTGTTTCTCTCTTG-CTTCTC
** * *** * * * * *
26344 GGTCGAACTTTCAAAGTTGACAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATT
65 GACCGAACTTACAAACCAGAAAAACTTTTACGAGTTCTTTCATAACTTCGATTCCCTAAAGTATT
* * * * * *
26409 CAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTTCATGCTTGGGAAATCGTATCATTTGG
130 CAAGACGATCCATTCATTCGAGCAATTTTCTAAACATTTCATCCTCGAGAAATCGCATCATTTGG
26474 TC
195 TC
26476 TAAATAGTT
1 TAAATAGTT
26485 GTCATTTTGT
Statistics
Matches: 176, Mismatches: 26, Indels: 6
0.85 0.12 0.03
Matches are distributed among these distances:
196 170 0.97
197 6 0.03
ACGTcount: A:0.29, C:0.17, G:0.15, T:0.39
Consensus pattern (196 bp):
TAAATAGTTTTGGTCTTTCAATTAAAAACTAATTTAGGTGAGAATTGTTTCTCTCTTGCTTCTCG
ACCGAACTTACAAACCAGAAAAACTTTTACGAGTTCTTTCATAACTTCGATTCCCTAAAGTATTC
AAGACGATCCATTCATTCGAGCAATTTTCTAAACATTTCATCCTCGAGAAATCGCATCATTTGGT
C
Found at i:27356 original size:215 final size:215
Alignment explanation
Indices: 26287--28731 Score: 2364
Period size: 215 Copynumber: 11.4 Consensus size: 215
26277 GTCTAAATAG
* * * * * * *
26287 TTTTGGTCTTTGAATTAAAAACTAATTTAGGTTAGAATTGTTTCTCTCTTGCCTT-TGGGTCGAA
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAG-GTTCTAGGCCGAA
* * * *
26351 CTTTCAAAGTTGACAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACG
65 CTTTCGAACTTGAAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACG
* * * * *
26416 ATCCATTCCTTCGAGCAA-TTTTCTGAACATTTCATGCTTGGGAAATCGTATCATTTGGTCTAAA
130 ATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAAA
*
26480 TAGTTGTCATTTTGTAGACAAC
194 TAGTTGTCATTTTGTAAACAAC
* * * * * * *
26502 TTTTGGTCTTTGAATTAAAAAATTCTATATGTGAGAATTA-TTTCTTTCTTGGTTCTCGGCCGAA
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAA-TAGTTTCTCTCTAGGTTCTAGGCCGAA
* * * * * * *
26566 CTTT-AAACTTGACAAACTTTTACAAGTGCTTTTATAACTTTC-TTTCATTAAAGTATTCAAGAT
65 CTTTCGAACTTGAAAAACTTTTACGAGTTCTTTTATAAC-TTCGGTTCCTTAAAGTATTCAAGAC
* * * * * *
26629 GATCCATTCCTTCGACCAA-TTTTCTGTACAGTCCATGCTTGGGAAATCACATC-ATTAGGTCTA
129 GATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTCGGGAAATCGCATCAATT-GTTCTA
* *
26692 AATAGTT-TTATTTTGTAAACTAC
192 AATAGTTGTCATTTTGTAAACAAC
* * * * * *
26715 TTTTGGT-TTTCCAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTCTTGGCTGAA
1 TTTTGGTCTTT-GAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCTAGGCCGAA
* * * * * * * *
26779 CTTACGAACCTGAAAAACTTATACGAGTTCTTTCATAACTTTGATTCCTTAAAGTATTCAGGGCG
65 CTTTCGAACTTGAAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACG
* * * * * * *
26844 ATCCATTCCTTTGA-CAATTTTTCGAACATTCGATGCTAGAGAAATTGCATCATTTGGTCT-AAT
130 ATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAAAT
*
26907 AGTTGTAATTTTGTAAACAAC
195 AGTTGTCATTTTGTAAACAAC
* *
26928 TTTTGGTCTTTAAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTAGGCCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCTAGGCCGAAC
* * * * * *
26993 TTCCGAAGTT-AACAAACTTTTACGACTTATTTTATAACTTCAGTTCCTTAAAGTATTCAAGATG
66 TTTCGAACTTGAA-AAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACG
* * * * ** * * * *** *
27057 ATACATTCCTTCAAGCACTTTTTTGAACATTTTAAGCTCAGGAAATCGCTTTGGTTGGTCTAAAT
130 ATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAAAT
*
27122 AGTTGTCATTTTATAAACAAC
195 AGTTGTCATTTTGTAAACAAC
* *
27143 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGATAATAGTTTCTCTCTAGGTTCTAGACCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCTAGGCCGAAC
* * * * * * *
27208 TTTCGAACTTCAAAAACCTTTACGAGTTCTTTTTTAACTTCAGTTCCTTAAATTATT-TAGATGA
66 TTTCGAACTTGAAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGA
* * * * * *
27272 TCTATACCTTCGAGCAATTTTTCAAACATTCAATTCTTGGGAAATCGCATCAATTGTTCTAAATA
131 TCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAAATA
*
27337 GATTGTCGTTTTGTAAACAAC
196 G-TTGTCATTTTGTAAACAAC
* * * * * *
27358 TTTTGGTCTTTGAAATAAAAACTTATTTATGTAAGAATTGTTTCTTTCTAGGTTCTCA-GCCAAA
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCT-AGGCCGAA
* * **
27422 CTTTTGAACTT-AACAAACTTTTACGAGTTCTTTTAT-AGTTTTGTTCCTTAAAGTATTCAAGAC
65 CTTTCGAACTTGAA-AAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAC
* * * * * ** * *
27485 GATCCATTCCTCCGAGCCATTTTCCGAACAATCCATGCTCTGGAAATCATATCATTTCATTC-AA
129 GATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATT-GTTCTAA
* **
27549 ATAGTTGTAATTTCATAAACAAC
193 ATAGTTGTCATTTTGTAAACAAC
* * * * * * *
27572 TTTTGGTATTTGAATTAAAAACTTATTTAGGTGATAATAGTTCCTCTCTAAGTTCTCGGCAGGAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCTAGGCCGAAC
* * * * *
27637 TTCCGAACTTGAAAAACATTTACGAGTTCTTTTTTTAACTTGGGTTCCTTAAAGTATTCAAGATG
66 TTTCGAACTTGAAAAACTTTTACGAGTTC-TTTTATAACTTCGGTTCCTTAAAGTATTCAAGACG
* * *
27702 ATCCATTCCTTCGCGTAATTTTCCGAACATTCCATGCTCGGG-AA----ATCAATTGTTCTAAAT
130 ATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAAAT
27762 AGATTGTCATTTTGTAAACAAC
195 AG-TTGTCATTTTGTAAACAAC
* ** * * * * * * * * *
27784 TTTCGACCTTTAAATTAAAAAGTTATTTATGTGAGAATTGATTCTTTCTTGGTTCTCGGTCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCTAGGCCGAAC
* **
27849 -TTCTGAATTTGACAAAA-TTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGAC
66 TTTC-GAACTTGA-AAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAC
* * * * * * * * *
27912 AATTCATTCCTTAGAGCCATTTTAC-ATACAGTCCTTGCTTGGGAAATCGCATC-ATTAGGTCTA
129 GATCCATTCCTTCGAGCAATTTTTCGA-ACATTCCATGCTCGGGAAATCGCATCAATT-GTTCTA
* *
27975 AATAGTTGTCATCTTGTAAACTAC
192 AATAGTTGTCATTTTGTAAACAAC
* * * * *
27999 TTTCGGTCTTTGAATTAAAAACTTATTTAGGTAAGAATTGTTTCTTTCTTA-GTTCTTGGCCGAA
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTC-TAGGTTCTAGGCCGAA
* * * * *
28063 CTTTCGAACTTGACAAACTTTTATGAGTTCTTTTATAACTTCAGTTCATTAAAGTATTTAAGACG
65 CTTTCGAACTTGAAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACG
* * * * * *
28128 ATCCACTCCTTCAAGCAATTTTTCGAACATTCCATGCTCGAGAAATTGCATCATTTGGTCTAAAT
130 ATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAAAT
28193 AGTTGTCATTTTGTAAACAAC
195 AGTTGTCATTTTGTAAACAAC
* * *
28214 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAATTTCTCTCTTGGTT-AACGGCCGAA
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCTA-GGCCGAA
* * * * * * *
28278 C-ATCTGAAGTTGACAATCTTTTACAAGTTCTTTTATAACTTCGGTTCCATAAATTATTCAAGAC
65 CTTTC-GAACTTGAAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGAC
* * *** * *
28342 AATCCATTCCTTCGAGCAATTTTTTGAACATTCCATGCTCAATAAATCGCATCATTTGGTCTAAA
129 GATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAAA
* *
28407 TAGTTGTCATTTTATAAAGAAC
194 TAGTTGTCATTTTGTAAACAAC
* * ** * *
28429 ATTTGTTCTTTGAATTAAAAACTTATTTAGGTG-GTAATAGTTTCTCAATTGGTTCTTGGCCGAA
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAG-AATAGTTTCTCTCTAGGTTCTAGGCCGAA
* * * * * *
28493 C-TTCTGAAGTTGACAAACTTTTATGAGTTATTTTTTAACTTCGGTTCCATAAAGTA-TCGAAGA
65 CTTTC-GAACTTGAAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTC-AAGA
* * ** * * * *
28556 TGATCCATTCCTTCGTGCAATTACTCGAACCTTCCATGTTCAGGAAATTGCATCAATTGTTCTAA
128 CGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAA
28621 ATAGATTGTCATTTTGTAAA-AAGC
193 ATAG-TTGTCATTTTGTAAACAA-C
* * * * * * * * * *
28645 TTTTGTTCTTTAAATTAAAAAGTTATTTATGTGAAAATTGTTTCTTTCTTGGTTCTTGGTCGAAC
1 TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCTAGGCCGAAC
**
28710 TTTCGAACTTGACGAACTTTTA
66 TTTCGAACTTGAAAAACTTTTA
28732 TTCCATAAAG
Statistics
Matches: 1844, Mismatches: 335, Indels: 101
0.81 0.15 0.04
Matches are distributed among these distances:
210 4 0.00
211 75 0.04
212 97 0.05
213 230 0.12
214 382 0.21
215 881 0.48
216 172 0.09
217 3 0.00
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.40
Consensus pattern (215 bp):
TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTAGGTTCTAGGCCGAAC
TTTCGAACTTGAAAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACGA
TCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCGGGAAATCGCATCAATTGTTCTAAATA
GTTGTCATTTTGTAAACAAC
Found at i:28880 original size:194 final size:195
Alignment explanation
Indices: 28537--28925 Score: 527
Period size: 194 Copynumber: 2.0 Consensus size: 195
28527 TTAACTTCGG
* * * *
28537 TTCCATAAAGTATCGAAGATGATCCATTCCTTCGTGCAATTACTCGAACCTTCCATGTTCAGGAA
1 TTCCATAAAGTATCGAAGACGATCCATTCCTTCGAGCAATTACTCAAACATTCCATGTTCAGGAA
* * * * *
28602 ATTGCATCAATTGTTCTAAATAGATTGTCATTTTGTAAAAAGCTTTTGTTCTTTAAATTAAAAAG
66 ATCGAATCAATTGGTCTAAATAGATTATCATTTTGTAAAAAGCTTTTGGTCTTTAAATTAAAAAG
* * * *
28667 TTATTTATGTGAAAATTGTTTCTTTCTTGGTTCTTGGTCGAACTTTCGAACTTGACGAACTTTTA
131 TTATTTATGTGAAAATTGTTTCTTTCTTGGTTCTCGATCGAACTTTCGAACTTGACAAAATTTTA
* *
28732 TTCCATAAAGTATTC-AAGACGATCCATTCCTTCGAGCAATT-TTCTAAACATTCCATGCTT-GG
1 TTCCATAAAGTA-TCGAAGACGATCCATTCCTTCGAGCAATTACTC-AAACATTCCATG-TTCAG
* * *
28794 GAAATCGAATCATTTGGTCTAAATA-TTTATCATTTTGTAAACAA-CTTTTGGTCTTTAAATTTA
63 GAAATCGAATCAATTGGTCTAAATAGATTATCATTTTGTAAA-AAGCTTTTGGTCTTTAAATTAA
* *
28857 AAAGTTATTTATGTGATAATTGTTTCTTTCTTTGTTCTCGATCGAACTTTCGAACTTGACAAAAT
127 AAAGTTATTTATGTGAAAATTGTTTCTTTCTTGGTTCTCGATCGAACTTTCGAACTTGACAAAAT
28922 TTTA
192 TTTA
28926 CAAGTTTTTT
Statistics
Matches: 170, Mismatches: 20, Indels: 9
0.85 0.10 0.05
Matches are distributed among these distances:
194 96 0.56
195 70 0.41
196 4 0.02
ACGTcount: A:0.29, C:0.16, G:0.14, T:0.41
Consensus pattern (195 bp):
TTCCATAAAGTATCGAAGACGATCCATTCCTTCGAGCAATTACTCAAACATTCCATGTTCAGGAA
ATCGAATCAATTGGTCTAAATAGATTATCATTTTGTAAAAAGCTTTTGGTCTTTAAATTAAAAAG
TTATTTATGTGAAAATTGTTTCTTTCTTGGTTCTCGATCGAACTTTCGAACTTGACAAAATTTTA
Found at i:29402 original size:215 final size:215
Alignment explanation
Indices: 28732--30656 Score: 1256
Period size: 215 Copynumber: 9.0 Consensus size: 215
28722 CGAACTTTTA
* * **
28732 TTCCATAAAGTATTCAAGACGATCCATTCCTTCGAGCAA-TTTTCTAAACATTCCATGCTTGGGA
1 TTCCATAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTC-GAACATTCCATGCTCAGGA
* * * * * *
28796 AATCGAATCATTTGGTCTAAATATTTATCATTTTGTAAACAACTTTTGGTCTTTAAATTTAAAAG
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * * ** *
28861 TTATTTATGTGATAATTGTTTCTTTCTTTGTTCTCGATCGAACTTTCGAACTTGACAAAATTTTA
130 TTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTA
* * *
28926 CAAGTTTTTTTATAACTTCGG
195 CGAGTTCTTTTATAACTTCTG
* * *
28947 TTCCTTAAAGTATTTAAGACGATCCATTCCTTCAAGCAATTTTTCGAGCATTCCATGCTC-GAGA
1 TTCCATAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCAG-GA
*
29011 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTT-GTCTTTGAATTAAAAAT
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* ** * ** * *
29075 TTATTTAGGTGAGAATAATTTCTCTCTTTGTTCAT-GGTTGAACTTCCGAAGTTGACAAACTTTT
130 TTATTTATGTGAGAATTGTTTCTCTCTTGGTTC-TCGGCCGAACTTTCGAACTTGACAAACTTTT
* * *
29139 ATGAGTTCTTTTATAACATCGG
194 ACGAGTTCTTTTATAACTTCTG
* * * *
29161 TTCCATAAATTATTCAAGACGATCCATTCCTTCGAGCAATTTTTTGAACATTCCTTGCTCAGGAA
1 TTCCATAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCAGGAA
* * * * * *
29226 ATTGCATCATTTGGTCTAAATAGTTGTCATTTTATAAACAACATTCGGTCTTTGAACTAAAAACA
66 ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
* * * * *
29291 TATTTAGGTGATAATAGTTTCTCTCTTGGTTCTCGGCCAAACTTTCGAAGTTGACAAACTTTTAC
131 TATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTAC
*
29356 GAGTTCTTTTTTAACTTCTG
196 GAGTTCTTTTATAACTTCTG
* * * * * * *
29376 TTCCTTAAAGTATTTAAGATGATCCATTCCATCGTGCAATTTTTCGAACATTCCAAGTTCGGGAA
1 TTCCATAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCAGGAA
* * * * * * *
29441 ATCGCATCAATTGTTCTAAATAGATTGTCATTTTGTAAAAAAAAAAAAATTATGTTCTTTAAATT
66 ATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGT------AAACAACTTTTGGTCTTTGAATT
** * * * * *
29506 AAAATGTTATTTATGTGAGAATTGTTT-TTTCTTTGTTCTCGGTCGAACTTCCGAACTTGAAAAA
124 AAAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAA
** * **** * *
29570 CTTTTGTTCCATAAAGTACCCAAGATGATCCATTC-C
189 C--TT-TT--A-CGAGT-TCTTTTAT-A-AC-TTCTG
* ** * * * * * * *
29606 TTCGAGCAATTTTTTGA-AC-ACTCCA-TGCTT-G-GGAA---ATCGAATCATT---TGGTCTA-
1 TTCCATAAAGTATTTAAGACGA-TCCATTCCTTCGAGCAATTTTTCGAA-CATTCCATGCTC-AG
* * * * *
29659 -AATATTTG--TCATTT--TGTAAACAACTTTGGGTC--TTTGAATTAAA-AAC---T--TATTT
63 GAA-A-TCGCATCATTTGGTCTAAA-TA-GTT--GTCATTTTG---TAAACAACTTTTGGTCTTT
** * * * * * * ** * ** * * *
29711 -AGGTGAGAA--TAGTTTCTCT----CTTGGTTCTC-AGTCGAACT--TCCGAACTTGACAAACT
119 GAATTAAAAACTTA-TTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTT-TCGAACT
* * * *
29766 T-------T--TACGAATTCTTCTATAACATCAG
182 TGACAAACTTTTACGAGTTCTTTTATAACTTCTG
* *
29791 TTCAATAAAGTATTTAAGACGATCCATTCCTTCGCA-CAATTTTCCGAACATTCCATGCTCAGGA
1 TTCCATAAAGTATTTAAGACGATCCATTCCTTCG-AGCAATTTTTCGAACATTCCATGCTCAGGA
* * * * *
29855 AATTGCATCATATGGTCTAAATAGTTCTCATTTTATAAACAACTTTTGGTGTTTGAATTAAAAAC
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * * * * * *
29920 ATT-TTTAAGTGATAATAGTTCCTCTCTTGGTTCTCAGCCAAACTTTCGAAGTTGACAAACTTTT
130 -TTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTT
* *
29984 ACGAGTTCTTTTTTAACTTCAG
194 ACGAGTTCTTTTATAACTTCTG
* * * * * *
30006 TTCCATAAAGTATTCAACACGATCCATTCCTTCGAGTAATTTTTTGAACATTCTATGCT-TGGAA
1 TTCCATAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCAGG-A
* * * *
30070 AATCGCATAAATTGTTCCAAATAGATTGTCATTTTGTAAACAACTTTTGGTCTTTGAA-TAAAAA
65 AATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA
* * *
30134 TGTTATTTATGTGAGAATTGTTTCTCTCTTAGTTCTCGGCCGAACTTCCGAACTTGACAAACTTT
129 -CTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTT
*
30199 TACGAGTTCTTTTAAAACATT-TG
193 TACGAGTTCTTTTATAAC-TTCTG
* * * * * * **
30222 TTCC-TAAGAGTATTTAATATGATTCATTCCTTCGAGCAATTTTTCGTACAGTCCATACTTGGGA
1 TTCCATAA-AGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCAGGA
* * * * *** *
30286 GATTGCATCATTCGGTCTAAATAGTTGTGATTTTGTAAACAACTTTCAATCTTTGAATTAAAAAA
65 AATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAC
* * *
30351 TTCTTTATGTGAGAATTGTTTCTTTCTTGGTTCTCGGCCGAACTTT-AAACTTGACAAACTTTCA
130 TTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAA----C-
* *
30415 ATTTTTCGCACAAGTTCTTTTATAACTTTTG
190 --TTTT---ACGAGTTCTTTTATAACTTCTG
* * * * *
30446 TT-CATTAAAGTATTCAAGATGATCCATTCCTTCGAGCAATTTTAT-GTACAGTCCATGCT-TGG
1 TTCCA-TAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTT-TCGAACATTCCATGCTCAGG
* * * * *
30508 AAAATCACATCATTAGGTCTAAATAGTTGTCATTTTGTAAACTATTTTTGGT-TTTCCAATTAAA
64 -AAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTT-GAATTAAA
* * * * * *
30572 AACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTCTCGGCAGAACTTACGAACCTT-AAAAACC
127 AACTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAA-CTTGACAAACT
* *
30636 TTTACGAGTTCATTCATAACT
191 TTTACGAGTTCTTTTATAACT
30657 ACGATTCCTT
Statistics
Matches: 1317, Mismatches: 281, Indels: 224
0.72 0.15 0.12
Matches are distributed among these distances:
184 2 0.00
185 12 0.01
186 7 0.01
187 8 0.01
188 3 0.00
189 3 0.00
191 5 0.00
192 8 0.01
193 9 0.01
194 6 0.00
195 12 0.01
196 2 0.00
197 5 0.00
198 4 0.00
199 5 0.00
200 4 0.00
202 8 0.01
203 6 0.00
204 15 0.01
205 5 0.00
206 5 0.00
207 9 0.01
208 5 0.00
209 4 0.00
210 4 0.00
212 1 0.00
213 1 0.00
214 198 0.15
215 444 0.34
216 186 0.14
217 4 0.00
218 9 0.01
219 7 0.01
220 7 0.01
221 43 0.03
222 39 0.03
223 15 0.01
224 160 0.12
225 10 0.01
226 7 0.01
227 4 0.00
228 6 0.00
229 6 0.00
230 11 0.01
231 3 0.00
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.40
Consensus pattern (215 bp):
TTCCATAAAGTATTTAAGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCTCAGGAA
ATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT
TATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTAC
GAGTTCTTTTATAACTTCTG
Found at i:31405 original size:215 final size:216
Alignment explanation
Indices: 30660--32546 Score: 1702
Period size: 215 Copynumber: 8.8 Consensus size: 216
30650 CATAACTACG
* * * * * * *
30660 ATTCCTTTGGGCAATTTCCCGAACATTCCATGC-TCGAGAAATCGCA-CAATTTGGTTC-GAATT
1 ATTCCTTCGAGCAATTTTCTGAACATTCCATGCTTAG-GAAATCGCATC-ATTTGGTTCTAAATA
* * * * * *
30722 GTTGTAATTTTGTGAACAACTTTTGGTCTTTGAATTAAAAACCTATTTAGGTGAGAATAGTTACT
64 GTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCT
* * * * * * * *
30787 CTATTGGTTCTAGGCTGAACTTTCGAAGTTAACAAACTTTTATGACTTCTTTTATAACTTCGGTT
129 CTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCGATT
30852 CCTTAAAGTATTCAAGACG----
194 CCTTAAAGTATTCAAGACGATCC
* * * * ***
30871 A-TCCTTC--G-AATTTTCTGAACATTCTAAGCTCAGGAAATCGCTTTGGTTGG-TCTAAATAGT
1 ATTCCTTCGAGCAATTTTCTGAACATTCCATGCTTAGGAAATCGCATCATTTGGTTCTAAATAGT
* * * * * * *
30931 TGTCATTTTATAAAAAAACTTTTGGTCATTGATTTAAAAAACTTATTTAGGTGATAATAGTTTCT
66 TGTCATTTTGT-AAACAACTTTTGGTCTTTGAATT-AAAAACTTATTTATGTGAGAATTGTTTCT
* * * * * * * * * *
30996 CTCTAGGTTCTGGGCCGAACTTTCAAACATCAAAAACCTTTACGAGTTCTTTTTTAACATCGATA
129 CTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCGATT
* * * *
31061 CCTTTAATTATTCAACACGATCT
194 CCTTAAAGTATTCAAGACGATCC
* * * * * *
31084 ATACCTTCGAGCAATTTT-TCAAACATTCCATTCTTAGGAAATCACATAAATT-GTTCTAAATAG
1 ATTCCTTCGAGCAATTTTCT-GAACATTCCATGCTTAGGAAATCGCATCATTTGGTTCTAAATAG
* *
31147 ATTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAATTTATTTATGTAAGAATTGTTTCT
65 -TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCT
* * * * * * **
31212 TTCTAGGTTCTCGGTCGAACTTCCGAACTTGACAAACTTTTATGAGTTCTTTTAGAACTTTTATT
129 CTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCGATT
31277 CCTTAAAGTATTCAAGACGATCC
194 CCTTAAAGTATTCAAGACGATCC
* * * * * * *
31300 ATTCCTCCCAGCCATTTTCTGAACAATCCATGCTTTGGAAATTGTATCATTTGGTTC-AAATAGT
1 ATTCCTTCGAGCAATTTTCTGAACATTCCATGCTTAGGAAATCGCATCATTTGGTTCTAAATAGT
* * * * * * * * **
31364 TGTCATTTTATAAACAACTTTTGGTATTTGAATTAAAAATTTATTTAGGAGATAATAGTTCCAAT
66 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCT
* * * * * * *
31429 CTAGGTTCTCGACAGAACTTTCAAACTTGACAAACATTTAAGAGTTCTTTGT-TGACTTCGATTC
131 CTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTT-TATAACTTCGATTC
*
31493 CTTAAAGTATTCAAGACGATCT
195 CTTAAAGTATTCAAGACGATCC
* ** ** *
31515 AGTCCTTCGCA-CAATTTTCCCAACATTCCATGCTCGGGAAATCGTATCATTT-GTTCTAAATAG
1 ATTCCTTCG-AGCAATTTTCTGAACATTCCATGCTTAGGAAATCGCATCATTTGGTTCTAAATAG
* * *
31578 ATTGGCATTTTGTAAA-ATACTTTTGGTCTTTAAATT-AAAAGTTATTTATGTGAGAATTGTTTC
65 -TTGTCATTTTGTAAACA-ACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTC
* * ** * * * * * *
31641 TTTCTTAGTTCTCGGTGGTACTTCCAAACTTGACAAACTTTTTCGAGTTTTTTTATAACTT-TAT
128 TCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCGAT
* *
31705 TCCTTAAAGCATTCAAGACAATCC
193 TCCTTAAAGTATTCAAGACGATCC
* * * * *
31729 ATTCCTTCGAGCCATTTTCTGAACAGTCCATGCTCAGGAAATTGCATCATATGG-TCTAAATAGT
1 ATTCCTTCGAGCAATTTTCTGAACATTCCATGCTTAGGAAATCGCATCATTTGGTTCTAAATAGT
* * * * * * * *
31793 TCTCATTTTGTAAACAATTTTTGGTGTTTGAATTAAAAACATATTTAAGTGATAATAGTTCCTCT
66 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCT
* * * *
31858 CTTGGTTCTCAGCCAAACTTTCGAAGTTGACAAACTTTTACGAGTTCTTTTTTAACTTC-AGTTC
131 CTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCGA-TTC
* *
31922 CATAAAGTATTCAACACGATCC
195 CTTAAAGTATTCAAGACGATCC
* * * * * * *
31944 ATTCCTTTGAGCAATTTT-TCAAACATTCTATGCTT-GGAAACTCACATAAATT-GTTCCAAATA
1 ATTCCTTCGAGCAATTTTCT-GAACATTCCATGCTTAGGAAA-TCGCATCATTTGGTTCTAAATA
* *
32006 GATTGTCATTTTGTAAACAACTTTTGGTCTTTGAA-TAAAAATGTTATTTATGTGAGAATTATTT
64 G-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTATGTGAGAATTGTTT
* * *
32070 CACTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACAAGTTCTTTTATAACTTTTG
127 CTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC-TTCG
*
32135 -TTCATTAAAGTATTCAAGACGATCC
191 ATTCCTTAAAGTATTCAAGACGATCC
* * * *
32160 ATTCCTTCGAGCAATTTTCTGTACAGTCCATGCTT-GGAAAATCACATCATTAGG-TCTAAATAG
1 ATTCCTTCGAGCAATTTTCTGAACATTCCATGCTTAGG-AAATCGCATCATTTGGTTCTAAATAG
* * * *
32223 TTGTCATTTTGTAAACTATTTTTGGT-TTTCCAATTAAAAACTTATTTAGGTGAGAATTGTTTCT
65 TTGTCATTTTGTAAACAACTTTTGGTCTTT-GAATTAAAAACTTATTTATGTGAGAATTGTTTCT
* * * * * * * * *
32287 CTTTTGGTTCTCGGCAGAACTTACGAACCTGAAAAACCTTTACGAGTTCATTCATAACTACGATT
129 CTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCGATT
32352 CCTTAAAGTATTCAAGACGATCC
194 CCTTAAAGTATTCAAGACGATCC
* * * * * *
32375 ATTCCTTTGAGCAATTTCCAGAACATTCCATG-GTCGAGAAATCGCA-CAATTTGG-TCTGAATA
1 ATTCCTTCGAGCAATTTTCTGAACATTCCATGCTTAG-GAAATCGCATC-ATTTGGTTCTAAATA
* * * * * *
32437 GTTGTAATTTTGTGAACAACTTTTGGTCTTCGAATTAAATTAAAATGTTATTTATGAGAGAATTC
64 GTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATT--A--AAAA-CTTATTTATGTGAGAATTG
* * * * * *
32502 TTT-TTTCTTTGTTCTCGGTCAAACTTTCGAGCATGACAAACTTTT
124 TTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTT
32547 GTTCCATTAA
Statistics
Matches: 1343, Mismatches: 281, Indels: 96
0.78 0.16 0.06
Matches are distributed among these distances:
206 2 0.00
207 43 0.03
208 21 0.02
209 91 0.07
210 5 0.00
211 1 0.00
213 30 0.02
214 168 0.13
215 503 0.37
216 345 0.26
217 70 0.05
218 11 0.01
219 35 0.03
220 18 0.01
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.39
Consensus pattern (216 bp):
ATTCCTTCGAGCAATTTTCTGAACATTCCATGCTTAGGAAATCGCATCATTTGGTTCTAAATAGT
TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCT
CTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCGATTCC
TTAAAGTATTCAAGACGATCC
Found at i:31544 original size:431 final size:429
Alignment explanation
Indices: 29568--33639 Score: 3513
Period size: 431 Copynumber: 9.6 Consensus size: 429
29558 GAACTTGAAA
* * ** * * *
29568 AACTTTTGTTCCATAAAGTACCCAAGATGATCCATTCCTTCGAGCAATTTTTTGAACACTCCATG
1 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCATG
* * * *
29633 CTTGGGAAATCGAATCATTTGGTCTAAATATTTGTCATTTTGTAAACAACTTTGGGTCTTTGAAT
66 CTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTATTTGAAT
* *
29698 TAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCAGTC-GAACTTCCGAACTTGACA
131 TAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTC-GGCAGAACTTTCGAACTTGACA
* * * ** *
29762 AACTTTTACGAATTCTTCTATAACATC-AGTTCAATAAAGTATTTAAGACGATCCATTCCTTCGC
195 AACTTTTACGAGTTCTT-TTTAACTTCGA-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCG-
* ** * *
29826 A-CAATTTTCCGAACATTCCATGCTCAGGAAATTGCAT-CATATGGTCTAAATAGTTCTCATTTT
257 AGCAATTTTCCGAACATTCCATGCTTAGGAAATCACATAAAT-TGGTCTAAATAGTTGTCATTTT
* * * * * *
29889 ATAAACAACTTTTGGTGTTTGAATTAAAAACATT-TTTAAGTGATAATAGTTCCTCTCTTGGTTC
321 GTAAACAACTTTTGGTCTTTGAATTAAAAAC-TTATTTATGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * *
29953 TCAGCCAAACTTTCGAAGTTGACAAACTTTTACGAGTTCTTTTTT
385 TCGGTCGAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTAT
* * * * * *
29998 AAC-TTCAGTTCCATAAAGTATTCAACACGATCCATTCCTTCGAGTAATTTTTTGAACATTCTAT
1 AACTTTTA-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCAT
* * * * * *
30062 GCTTGGAAAATCGCATAAATTGTTCCAAATAGATTGTCATTTTGTAAACAACTTTTGGTCTTTGA
65 GCTTGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTATTTGA
* * * * * *
30127 A-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTAGTTCTCGGCCGAACTTCCGAACTTGA
129 ATTAAAAA-CTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCGGCAGAACTTTCGAACTTGA
* * * * * *
30191 CAAACTTTTACGAGTTCTTTTAAAACATTTG-TTCC-TAAGAGTATTTAATATGATTCATTCCTT
193 CAAACTTTTACGAGTTCTTTT-TAAC-TTCGATTCCTTAA-AGTATTCAAGACGATCCATTCCTT
* * * * * * ** * *
30254 CGAGCAATTTTTCGTACAGTCCATACTTGGGAGATTGCAT-CATTCGGTCTAAATAGTTGTGATT
255 CGAGCAATTTTCCGAACATTCCATGCTTAGGAAATCACATAAATT-GGTCTAAATAGTTGTCATT
*** * * *
30318 TTGTAAACAACTTTCAATCTTTGAATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCTTGGTT
319 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTT
* * *
30383 CTCGGCCGAACTTT-AAACTTGACAAACTTTCAATTTTTCGCACAAGTTCTTTTAT
384 CTCGGTCGAACTTTCGAACTTGACAAAC--T---TTTAT-G----AGTTCTTTTAT
* * * * * *
30438 AACTTTTGTTCATTAAAGTATTCAAGATGATCCATTCCTTCGAGCAATTTTATGTACAGTCCATG
1 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCATG
* * * * * *
30503 CTTGGAAAATCACATCATTAGGTCTAAATAGTTGTCATTTTGTAAACTATTTTTGGT-TTTCCAA
66 CTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTATTT-GAA
* * * *
30567 TTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTCTCGGCAGAACTTACGAACCTT-AA
130 TTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCGGCAGAACTTTCGAA-CTTGAC
* * * *
30631 AAACCTTTACGAGTTC------A-TTC-A-----T--A--A--C--TACG----ATTCCTTTGGG
194 AAACTTTTACGAGTTCTTTTTAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAG
* * * * * * * *
30671 CAATTTCCCGAACATTCCATGC-TCGAGAAATCGCACAATTTGGT-TCGAATTGTTGTAATTTTG
259 CAATTTTCCGAACATTCCATGCTTAG-GAAATCACATAAATTGGTCT-AAATAGTTGTCATTTTG
* * * * * * *
30734 TGAACAACTTTTGGTCTTTGAATTAAAAACCTATTTAGGTGAGAATAGTTACTCTATTGGTTCTA
322 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTC
* * *
30799 GG-CTGAACTTTCGAAGTTAACAAACTTTTATGACTTCTTTTAT
387 GGTC-GAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTAT
*** * *
30842 AACTTCGGTTCCTTAAAGTATTCAAGACG----A-TCCTTC--G-AATTTTCTGAACATTCTAAG
1 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCATG
** * *** * *
30899 CTCAGGAAATCGCTTTGGTTGGTCTAAATAGTTGTCATTTTATAAAAAAACTTTTGGTCA-TTGA
66 CTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGT-AAACAACTTTTGGT-ATTTGA
* * * * * * * *
30963 TTTAAAAAACTTATTTAGGTGATAATAGTTTCTCTCTAGGTTCTGGGCCGAACTTTCAAACATCA
129 ATT-AAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCGGCAGAACTTTCGAACTTGA
* * * * * * * * *
31028 AAAACCTTTACGAGTTCTTTTTTAACATCGATACCTTTAATTATTCAACACGATCTATACCTTCG
193 CAAACTTTTACGAGTTC-TTTTTAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * *
31093 AGCAATTTTTCAAACATTCCATTCTTAGGAAATCACATAAATTGTTCTAAATAGATTGTCATTTT
257 AGCAATTTTCCGAACATTCCATGCTTAGGAAATCACATAAATTGGTCTAAATAG-TTGTCATTTT
* * * *
31158 GTAAACAACTTTTGGTCTTTGAATTAAAAATTTATTTATGTAAGAATTGTTTCTTTCTAGGTTCT
321 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCT
* *
31223 CGGTCGAACTTCCGAACTTGACAAACTTTTATGAGTTCTTTTAG
386 CGGTCGAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTAT
* * * *
31267 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTCCCAGCCATTTTCTGAACAATCCATG
1 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCATG
* * * *
31332 CTTTGGAAATTGTATCATTTGGT-TCAAATAGTTGTCATTTTATAAACAACTTTTGGTATTTGAA
66 CTTGGGAAATCGCATCATTTGGTCT-AAATAGTTGTCATTTTGTAAACAACTTTTGGTATTTGAA
* * * * ** * * *
31396 TTAAAAATTTATTTAGGAGATAATAGTTCCAATCTAGGTTCTCGACAGAACTTTCAAACTTGACA
130 TTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCGGCAGAACTTTCGAACTTGACA
* * * * *
31461 AACATTTAAGAGTTCTTTGTTGACTTCGATTCCTTAAAGTATTCAAGACGATCTAGTCCTTCGCA
195 AACTTTTACGAGTTCTTT-TTAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCG-A
* ** ** * * * *
31526 -CAATTTTCCCAACATTCCATGCTCGGGAAATCGTATCATTTGTTCTAAATAGATTGGCATTTTG
258 GCAATTTTCCGAACATTCCATGCTTAGGAAATCACATAAATTGGTCTAAATAG-TTGTCATTTTG
* * * *
31590 TAAA-ATACTTTTGGTCTTTAAATT-AAAAGTTATTTATGTGAGAATTGTTTCTTTCTTAGTTCT
322 TAAACA-ACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCT
* * * * *
31653 CGGTGGTACTTCCAAACTTGACAAACTTTT-TCGAGTTTTTTTAT
386 CGGTCGAACTTTCGAACTTGACAAACTTTTAT-GAGTTCTTTTAT
* * * *
31697 AAC-TTTATTCCTTAAAGCATTCAAGACAATCCATTCCTTCGAGCCATTTTCTGAACAGTCCATG
1 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCATG
** * * * * *
31761 CTCAGGAAATTGCATCATATGGTCTAAATAGTTCTCATTTTGTAAACAATTTTTGGTGTTTGAAT
66 CTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTATTTGAAT
* * * * * *
31826 TAAAAACATATTTAAGTGATAATAGTTCCTCTCTTGGTTCTCAGCCA-AACTTTCGAAGTTGACA
131 TAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTC-GGCAGAACTTTCGAACTTGACA
* * *
31890 AACTTTTACGAGTTCTTTTTTAACTTC-AGTTCCATAAAGTATTCAACACGATCCATTCCTTTGA
195 AACTTTTACGAGTTC-TTTTTAACTTCGA-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * *
31954 GCAATTTTTCAAACATTCTATGCTT-GGAAACTCACATAAATTGTTCCAAATAGATTGTCATTTT
258 GCAATTTTCCGAACATTCCATGCTTAGGAAA-TCACATAAATTGGTCTAAATAG-TTGTCATTTT
* * *
32018 GTAAACAACTTTTGGTCTTTGAA-TAAAAATGTTATTTATGTGAGAATTATTTCACTCTTGGTTC
321 GTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTATGTGAGAATTGTTTCTCTCTTGGTTC
* **
32082 TCGGCCGAACTTTCGAACTTGACAAACTTTTACAAGTTCTTTTAT
385 TCGGTCGAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTAT
* * * *
32127 AACTTTTGTTCATTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGTACAGTCCATG
1 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCATG
* * * * * *
32192 CTTGGAAAATCACATCATTAGGTCTAAATAGTTGTCATTTTGTAAACTATTTTTGGT-TTTCCAA
66 CTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTATTT-GAA
* * * * *
32256 TTAAAAACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTCTCGGCAGAACTTACGAACCTGAAA
130 TTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCGGCAGAACTTTCGAACTTGACA
* ** * *
32321 AACCTTTACGAGTTCATTCATAACTACGATTCCTTAAAGTATTCAAGACGATCCATTCCTTTGAG
195 AACTTTTACGAGTTC-TTTTTAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAG
* * * * * * *
32386 CAA-TTTCCAGAACATTCCATG-GTCGAGAAATCGCACAATTTGGTCTGAATAGTTGTAATTTTG
259 CAATTTTCC-GAACATTCCATGCTTAG-GAAATCACATAAATTGGTCTAAATAGTTGTCATTTTG
* * * * * * *
32449 TGAACAACTTTTGGTCTTCGAATTAAATTAAAATGTTATTTATGAGAGAATTCTTT-TTTCTTTG
322 TAAACAACTTTTGGTCTTTGAATT--A--AAAA-CTTATTTATGTGAGAATTGTTTCTCTCTTGG
* * *
32513 TTCTCGGTCAAACTTTCGAGCATGACAAAC-TTT-T--GTTC------
382 TTCTCGGTCGAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTAT
* *
32551 --C----A----TT-AAGTATTCAAGACGATCCATTCCTTCGAGTAATTTTTTGAACATTCCATG
1 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCATG
* * *
32605 CTTGGGAAATCGAATCATTTGGTCTAAATATTTGTCATTTTGTAAACAAC-TTTGGGACTTTGAA
66 CTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTA-TTTGAA
*
32669 TTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCAGTC-GAACTTTCGAACTTGAC
130 TTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTC-GGCAGAACTTTCGAACTTGAC
* * * * * * *
32733 AAAC-GTCACGAATTCTTCTATAACATC-AGTTCATTAAAGTATTTAAGACGATCCATTCCTTCG
194 AAACTTTTACGAGTTCTT-TTTAACTTCGA-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * *
32796 CA-CAATTTTCCGAACATTCCATGCTCAGGAAATTACAT-CATATGGTCTAAATAGTTCTCATTT
257 -AGCAATTTTCCGAACATTCCATGCTTAGGAAATCACATAAAT-TGGTCTAAATAGTTGTCATTT
* * * * * *
32859 TATAAACAACTTTTGGTCTTTGAATTAAAAACATATTTAAGTGATAATAGTTCCTCTCTTGGTTC
320 TGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTTC
* * * * * * * *
32924 TCAGCCAAACTTTCAAAGTTGACAAAATTTTACGAGTTCTTTTTT
385 TCGGTCGAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTAT
* * * * * **
32969 AAC-TTCAGTTCCATAAAGTATTAAACACGATCCATTCCTTCAAGCAATTTT-TCGAACATTCTG
1 AACTTTTA-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCT-GAACATTCCA
* * * * * * * *
33032 TACTTGGGAAATCACATAAATTGTTCCAAATAGATTGTCATTTTGTAAACAACTTCTGGTCTTTG
64 TGCTTGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTATTTG
* * * * *
33097 AA-TAAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCA-AACTTCCGAACAT
128 AATTAAAAA-CTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCGG-CAGAACTTTCGAACTT
* * *
33160 GACAAACTTTTATGAGTTCTTTTAAAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCATTCCT
191 GACAAACTTTTACGAGTTCTTTT-TAAC-TTCGATTCCTTAAAGTATTCAAGACGATCCATTCCT
* * * * * * * * *
33224 TTGAGCAGTTTTTCGAACATTACATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTGATT
254 TCGAGCAATTTTCCGAACATTCCATGCTTAGGAAATCACATAAATTGGTCTAAATAGTTGTCATT
* * * *
33289 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGATAATAGTTTCTCTCTAGGTT
319 TTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTT
* * * * *
33354 -TTGGTCCGAACTTTCGAACTTCAAAAAC-TTTACGAGTTCTTTTTT
384 CTCGGT-CGAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTAT
*** * * * * * * *
33399 AACTTCGGTTCCTTAAATTATTCAAGACGATCTATACCTTCAAGCAGTTTT-TCAAACATTCAAT
1 AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCT-GAACATTCCAT
* * * * * * *
33463 TCTTGGGAAATCTCATCAATTGTTCTAAATAGATTGTCGTTTTATAAACAACTTTTGGTCTTTGA
65 GCTTGGGAAATCGCATCATTTGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTATTTGA
* * * * * * *
33528 AATAAAAACTTATTTATGTAAGAATTGTTTCT-TTTTAGGTTCTCGGCCGAACTTTTGAACTTGA
129 ATTAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTT-GGTTCTCGGCAGAACTTTCGAACTTGA
* **
33592 CAAACTTTTACGAGTTC-TTTTATAGTTTTATTCCTTAAAGTATTCAAG
193 CAAACTTTTACGAGTTCTTTTTA-ACTTCGATTCCTTAAAGTATTCAAG
33640 CCATTTTTAA
Statistics
Matches: 2979, Mismatches: 511, Indels: 305
0.78 0.13 0.08
Matches are distributed among these distances:
396 48 0.02
397 17 0.01
398 68 0.02
399 6 0.00
400 1 0.00
404 35 0.01
405 1 0.00
406 2 0.00
407 15 0.01
408 34 0.01
409 7 0.00
410 1 0.00
411 4 0.00
412 123 0.04
413 268 0.09
414 20 0.01
416 1 0.00
417 3 0.00
418 1 0.00
420 4 0.00
421 1 0.00
422 1 0.00
423 2 0.00
424 44 0.01
425 129 0.04
426 2 0.00
428 14 0.00
429 383 0.13
430 577 0.19
431 835 0.28
432 32 0.01
433 53 0.02
434 31 0.01
435 28 0.01
436 1 0.00
438 3 0.00
439 87 0.03
440 95 0.03
441 2 0.00
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.39
Consensus pattern (429 bp):
AACTTTTATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACATTCCATG
CTTGGGAAATCGCATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTATTTGAAT
TAAAAACTTATTTAGGTGAGAATAGTTTCTCTCTTGGTTCTCGGCAGAACTTTCGAACTTGACAA
ACTTTTACGAGTTCTTTTTAACTTCGATTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCA
ATTTTCCGAACATTCCATGCTTAGGAAATCACATAAATTGGTCTAAATAGTTGTCATTTTGTAAA
CAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGTC
GAACTTTCGAACTTGACAAACTTTTATGAGTTCTTTTAT
Found at i:33513 original size:215 final size:214
Alignment explanation
Indices: 31569--33639 Score: 1904
Period size: 215 Copynumber: 9.7 Consensus size: 214
31559 TATCATTTGT
* * * *
31569 TCTAAATAGATTGGCATTTTGTAAA-ATACTTTTGGTCTTTAAATT-AAAAGTTATTTATGTGAG
1 TCTAAATAG-TTGTCATTTTGTAAACA-ACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAG
* * * ** * * * * *
31632 AATTGTTTCTTTCTTAGTTCTCGGTGGTACTTCCAAACTTGACAAACTTTTTCGAGTTTTTTTAT
64 AATAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAAC-TTTACGAGTTCTTTTAT
* * * * * * *
31697 AACTTTA-TTCCTTAAAGCATTCAAGACAATCCATTCCTTCGAGCCA-TTTTCTGAACAGTCCAT
128 AACTTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTC-GAACATTCAAT
** *
31760 GCTCAGGAAATTGCATC-ATATGG
192 GCTTGGGAAATCGCATCAAT-TGG
* * * * * *
31783 TCTAAATAGTTCTCATTTTGTAAACAATTTTTGGTGTTTGAATTAAAAACATATTTAAGTGATAA
1 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAA
* * * * *
31848 TAGTTCCTCTCTTGGTTCTCAGCCAAACTTTCGAAGTTGACAAACTTTTACGAGTTCTTTTTTAA
66 TAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAAC-TTTACGAGTTCTTTTATAA
* * ** * *
31913 CTTCAGTTCCATAAAGTATTCAACACGATCCATTCCTTTGAGCAATTTTTCAAACATTCTATGCT
130 CTTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTCGAACATTCAATGCT
* * *
31978 T-GGAAACTCACATAAATTGT
195 TGGGAAA-TCGCATCAATTGG
* * *
31998 TCCAAATAGATTGTCATTTTGTAAACAACTTTTGGTCTTTGAA-TAAAAATGTTATTTATGTGAG
1 TCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTAGGTGAG
* *
32062 AATTA-TTTCACTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTTACAAGTTCTTTTA
64 AA-TAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAAC-TTTACGAGTTCTTTTA
** * * * * *
32126 TAACTTTTGTTCATTAAAGTATTCAAGACGATCCATTCCTTCGAGCAA-TTTTCTGTACAGTCCA
127 TAACTTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTC-GAACATTCAA
* *
32190 TGCTTGGAAAATCACATC-ATTAGG
191 TGCTTGGGAAATCGCATCAATT-GG
* * *
32214 TCTAAATAGTTGTCATTTTGTAAACTATTTTTGGT-TTTCCAATTAAAAACTTATTTAGGTGAGA
1 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTT-GAATTAAAAACTTATTTAGGTGAGA
* * * * * * * *
32278 ATTGTTTCTCTTTTGGTTCTCGGCAGAACTTACGAACCTGAAAAACCTTTACGAGTTCATTCATA
65 ATAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAA-CTTTACGAGTTCTTTTATA
* ** * *
32343 ACTAC-GATTCCTTAAAGTATTCAAGACGATCCATTCCTTTGAGCAA-TTTCCAGAACATTCCAT
129 ACTTCAG-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTC-GAACATTCAAT
* * *
32406 GGTCGAGAAATCGCA-CAATTTGG
192 GCTTGGGAAATCGCATCAA-TTGG
* * * * * * *
32429 TCTGAATAGTTGTAATTTTGTGAACAACTTTTGGTCTTCGAATTAAATTAAAATGTTATTTATGA
1 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATT--A--AAAA-CTTATTTAGGT
** * * * * * * *
32494 GAGAATTCTTT-TTTCTTTGTTCTCGGTCAAACTTTCGAGCATGAC-AA----AC---TT-TTGT
61 GAGAATAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTACGAGTTCTTTT
* * * *
32549 -T--C--CA-----TT-AAGTATTCAAGACGATCCATTCCTTCGAGTAATTTTTTGAACATTCCA
126 ATAACTTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTCGAACATTCAA
* *
32603 TGCTTGGGAAATCGAATCATTTGG
191 TGCTTGGGAAATCGCATCAATTGG
* * *
32627 TCTAAATATTTGTCATTTTGTAAACAACTTTGGGACTTTGAATTAAAAACTTATTTAGGTGAGAA
1 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAA
* * * * * *
32692 TAGTTTCTCTCTTGGTTCTCAGTCGAACTTTCGAACTTGACAAACGTCACGAATTCTTCTATAAC
66 TAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTACGAGTTCTTTTATAAC
* * * * * *
32757 ATCAGTTCATTAAAGTATTTAAGACGATCCATTCCTTCGCA-CAATTTTCCGAACATTCCATGCT
131 TTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTC-AAGCAATTTTTCGAACATTCAATGCT
** **
32821 CAGGAAATTACATC-ATATGG
195 TGGGAAATCGCATCAAT-TGG
* * * * *
32841 TCTAAATAGTTCTCATTTTATAAACAACTTTTGGTCTTTGAATTAAAAACATATTTAAGTGATAA
1 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAA
* * * * * * *
32906 TAGTTCCTCTCTTGGTTCTCAGCCAAACTTTCAAAGTTGACAAAATTTTACGAGTTCTTTTTTAA
66 TAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGAC-AAACTTTACGAGTTCTTTTATAA
* * * ** *
32971 CTTCAGTTCCATAAAGTATTAAACACGATCCATTCCTTCAAGCAATTTTTCGAACATTCTGTACT
130 CTTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTCGAACATTCAATGCT
* * *
33036 TGGGAAATCACATAAATTGT
195 TGGGAAATCGCATCAATTGG
* * * *
33056 TCCAAATAGATTGTCATTTTGTAAACAACTTCTGGTCTTTGAA-TAAAAATGTTATTTATGTGAG
1 TCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTAGGTGAG
* * * * * *
33120 AATTGTTTCTCTCTTGGTTCTCGGCCAAACTTCCGAACATGACAAACTTTTATGAGTTCTTTTAA
64 AATAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAAC-TTTACGAGTTCTTTTAT
** ** *
33185 AACTTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTTGAGCAGTTTTTCGAACATT-ACAT
128 AACTTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTCGAACATTCA-AT
*
33249 GCTTGGGAAATCGCATCATTTGG
192 GCTTGGGAAATCGCATCAATTGG
* *
33272 TCTAAATAGTTGTGATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGATAA
1 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAA
* * * * *
33337 TAGTTTCTCTCTAGGTT-TTGGTCCGAACTTTCGAACTTCAAAAACTTTACGAGTTCTTTTTTAA
66 TAGTTTCTCTCTTGGTTCTCGG-CCGAACTTTCGAACTTGACAAACTTTACGAGTTCTTTTATAA
* * * * * * *
33401 CTTCGGTTCCTTAAATTATTCAAGACGATCTATACCTTCAAGCAGTTTTTCAAACATTCAATTCT
130 CTTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTCGAACATTCAATGCT
* *
33466 TGGGAAATCTCATCAATTGT
195 TGGGAAATCGCATCAATTGG
* * * * *
33486 TCTAAATAGATTGTCGTTTTATAAACAACTTTTGGTCTTTGAAATAAAAACTTATTTATGTAAGA
1 TCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGA
* * *
33551 ATTGTTTCT-TTTTAGGTTCTCGGCCGAACTTTTGAACTTGACAAACTTTTACGAGTTCTTTTAT
65 ATAGTTTCTCTCTT-GGTTCTCGGCCGAACTTTCGAACTTGACAAAC-TTTACGAGTTCTTTTAT
** *
33615 AGTTTTA-TTCCTTAAAGTATTCAAG
128 AACTTCAGTTCCTTAAAGTATTCAAG
33640 CCATTTTTAA
Statistics
Matches: 1516, Mismatches: 276, Indels: 129
0.79 0.14 0.07
Matches are distributed among these distances:
193 17 0.01
194 32 0.02
195 2 0.00
196 1 0.00
198 93 0.06
199 9 0.01
202 2 0.00
203 3 0.00
204 2 0.00
206 2 0.00
208 3 0.00
209 1 0.00
210 2 0.00
213 33 0.02
214 343 0.23
215 537 0.35
216 379 0.25
217 7 0.00
218 2 0.00
219 28 0.02
220 18 0.01
ACGTcount: A:0.30, C:0.17, G:0.14, T:0.39
Consensus pattern (214 bp):
TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAA
TAGTTTCTCTCTTGGTTCTCGGCCGAACTTTCGAACTTGACAAACTTTACGAGTTCTTTTATAAC
TTCAGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCAAGCAATTTTTCGAACATTCAATGCTT
GGGAAATCGCATCAATTGG
Found at i:34169 original size:215 final size:215
Alignment explanation
Indices: 33729--43926 Score: 7166
Period size: 215 Copynumber: 47.4 Consensus size: 215
33719 TTGAATTAAA
* * * * ** * *
33729 AACTTGACAAACATTTACGGGTTATTTTTTAACTTGGGTTCCTAAAAGTATTCAAGATGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * ** * *
33794 TCCTTCGCA-CGATTTTTCAAACATTCCATGCTCGAGAAATCGTTTCAATTGTTCTAAATAGATT
66 TCCTTCG-AGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAG-TT
* * * * **
33858 GTCATTTTGTAACCAACTTTTGGTCTTTAAATTAAAAAGTTATTTATGTGAGAACCGTTTCTTTC
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTC
**
33923 TTGGTTCTCGGTTGAAC-TTCTG
194 TTGGTTCTCGGCCGAACTTTC-G
* *
33945 AATTTGACAAACTTTTATGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * *
34010 TCCTTCGAGCCATTTTACATACAGTCCATGCTTGGGAAATCGCATCATTAGGTCTAAATAGTTGT
66 TCCTTCGAGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTGT
* * * *
34075 CATCTTGTAAACTACTTTTGGTCTTTCAATTAAAAACTTATTTAGGTGAAAATTGTTTCTTTCTT
131 CATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTT
* *
34140 AGTTCTCGGCCGAACTTTTG
196 GGTTCTCGGCCGAACTTTCG
* * * * *
34160 AACTTGACAAACTTTTACGAGTTCTTTTATAAC-TTCGATTCCTTAAAGTATTTAGGATGATCCT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCA
* * * * *
34224 TTCCTTCAAGCAATTTTTCAAACATTCCATGCTCGAGAAATCACATCATTTGGTCTAAATAGTTG
65 TTCCTTCGAGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * *
34289 TCATTTTGTAAACTATTTTTGGT-TTTCCAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTT
130 TCATTTTGTAAACAACTTTTGGTCTTT-GAATTAAAAACTTATTTAGGTGAGAATTGTTTCT-TT
* * * *
34353 -TCGATTCTCGGCAGAACTTACG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * * * * **
34375 AGCCTGAAAAACATTTACGAGTTCATTCATAAC-TACGATTCCTTAAAGTATTCAAGACGATCCA
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCA
* * * * * *
34439 TTCCTTTGAGCAA-TTTCCAGAACATTCCATGCTCGAGAAATCGCA-CAATTTGGTCTGAATAGT
65 TTCCTTCGAGCAATTTTTCA-TACATTCCATGCTTGGGAAATCGCATC-ATTTGGTCTAAATAGT
* * * * * *
34502 TGTAATTTAGTGAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTACTCT
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTT
* *
34567 CTTGGTTCTAGGCTGAACTTTCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * * * ** *
34590 AAGTTAACAAACTGTTACAACTTCTTTTATAACTTCGGTTCCTTATAGTATTCAAGACG----A-
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * ** *
34650 TCCTTCGTGCAA-TTTTC-TGACCATTCCAAGCTCAGAAAATCGCATCATTTGGTCTAAATAGTT
66 TCCTTCGAGCAATTTTTCAT-A-CATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTT
* * * * *
34713 GTCATTTTATAAAAAACTTTTGGTCTTTGAATTAAAAAACTTATTTAGGTGATAATAGTTTCTCT
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATT-AAAAACTTATTTAGGTGAGAATTGTTTCTTT
* *
34778 CTAGGTTCTAGGCCGAACTTTCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * * * ** * * * *
34801 AACTTCAAAAACCTTTATGAGTTCTTTTTTAACTTCGGTT-CTTGTAATTATTCAACACGATCTA
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTT-AAAGTATTCAAGACGATCCA
* * ** * * *
34865 TACCTTCGAGCAATTTTTCGA-ACATTCCATTCTCAGGAAATCGCATAAATTGTTCTAAATAGAT
65 TTCCTTCGAGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAG-T
* *
34929 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTATGTAAGAATTGTTTCTTT
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTT
* *
34994 CTAGGTTCTCGGCCGAACTTTCC
193 CTTGGTTCTCGGCCGAACTTTCG
* * * * *
35017 AATTTGACAAACTTTAATGAGTTCTTTTATAACTTTTATTCCTTAAAGTATTCAAGATGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * * * *
35082 TCCTCCCAGCCATTTTCCGA-ACAATCCATGCTCT-GGAAATTGTATCATTTGGT-TCAAATAGT
66 TCCTTCGAGCAATTTTTC-ATACATTCCATGCT-TGGGAAATCGCATCATTTGGTCT-AAATAGT
* * * * * * * **
35144 TGTCATTTTATAAACAACTTTTGGTATTTGAATTAAAAGCTTATTTAGGAGATAATAGTTCCAAT
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTT
* *
35209 CTAGGTTCTCGGCAGAACTTTCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * * * *
35232 AACTTGACAAACATTTAAGAGTTCTTTGT-TGAC-TTCGATTCCTTAAAGTATTCAAGATGATTC
1 AACTTGACAAACTTTTACGAGTTCTTT-TATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCC
* * * *
35295 ATTCCTTCGCA-CAATTTTCCCA-ACATTCCATGCTCGGGAAATCGTATCATTTGTTCTAAATAG
64 ATTCCTTCG-AGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAG
* * * * *
35358 ATTGGCATTTTGTAAACAGCTTTTGGTCTTTAAATTAAAAAGTTATTTATGTGAGAATTGTTTCT
127 -TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCT
* * *
35423 TTCTTGGTTCTTGGTCGAACTTCCG
191 TTCTTGGTTCTCGGCCGAACTTTCG
* * * * *
35448 AACATGACAAACTTTTACGAGTTATTTTATAACTTTTATTCCTTAAAGCATTCAAGACAATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * *
35513 TCCTTCGAGCCATTTTCTGA-ACAGTCCATGGTTGGGAAATCGCATCATTAT-GTCTAAATAGTT
66 TCCTTCGAGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATT-TGGTCTAAATAGTT
* * * * * *
35576 TTCATTTTGTAAACTACTTTTGGTTTTTAAATTAAAAA-TCTATTTATGTGAAAATTGTTTCTTT
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACT-TATTTAGGTGAGAATTGTTTCTTT
* *
35640 CTTGGTTCTCGGTCGAACTTCCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * * *
35663 AACTTGAAAAACTTTTGCGAGTTATTTTATAACTTTGGTTCCTTAAAGTATTTAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * *
35728 TCCTTCAAGCAATTTTTCGA-ACATTTCATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTG
66 TCCTTCGAGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* ** *
35792 TCATTTTG-AAACAACTTTT-GTCTTTGAATTAAAAACTTATTTAGGAGAGAATAATTTCTCTCT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* * * **
35855 TTGTTCACGGTCGAACGATCG
195 TGGTTCTCGGCCGAACTTTCG
* * * ** * *
35876 AAGTTGACAAACTTTTATGAGTTCTTTTATAACATCGGTTCCATAAATTATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * *
35941 TCCTTCAAGCAATTTTCTGA-ACATTCTATG-TTCGGGAAATCGCATCAATTGTTCTAAATAGAT
66 TCCTTCGAGCAATTTT-TCATACATTCCATGCTT-GGGAAATCGCATCATTTGGTCTAAATAG-T
* * * * * * *
36004 TGTCATTTTATAAACAACATTCGGTCTTTGAATTAAAAGCTTATTTAGGTGATAGTAGTTTC--T
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTT
* *
36067 C-----TCTCCGTCGAACTTTCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * * ** * *
36085 AACTTGACAAACTGTTACGAATTCTTCTATAACATCAGTTCATTAAAGTATTTAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * ** ** *
36150 TCCTTCTCA-CAATTTTCTGA-ACATTCCATGCTCAGGAAATTACATCATATGGTCTAAATAGTT
66 TCCTTC-GAGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTT
* * * * * * * *
36213 CTCATTTTATAAACAACTTTTGGTCTTTGAATTAAAAACATATTTAAGTGATAATAGTTCCTCTC
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTC
* *
36278 TTGGTTCTCAGCCAAACTTTCG
194 TTGGTTCTCGGCCGAACTTTCG
* * * * * ** * *
36300 AAGTTGAAAAAATTTTATGAGTTCTTTTTTAACTTCAGTTCCATAAAGTATTCAACACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* ** * * * *
36365 TCCTTCAAGCAATTTTTCGA-ACATTCTGTGCTTGGGAAATCGCATAAATTGTTCCAAATAGATT
66 TCCTTCGAGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAG-TT
* ** * * *
36429 GTCATTTTGTAAACAACTTTTGGTCTTTGAA-TAAAAATATTATTTATATAAGAATTATTTCTCT
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTTT
*
36493 CTTGGTTCTCGGCCGAACTTCCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * *
36516 AACTTGACAAACTTTTACAAGTTCTTTTAAAACTTTTGTTCCTTAAAGTGTTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * *
36581 TCCTTCGAGCAGTTTTTTGA-ACATTACATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
66 TCCTTCGAGCA-ATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * * * * * * * *
36645 TGATTTTTTAAATAACTTTTGGTCTTTGGATTAGAAACTTATTTACGTGATAATAGTTTCTCTCT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* * *
36710 AGGTTCT-GGACAGAACTTTTG
195 TGGTTCTCGG-CCGAACTTTCG
* * * * * * *
36731 AACTTCAAAAACCTTTACGAGTTCTTTTTTAAC-TTTGATTCCTTAAATTATTCAGGACGATCTA
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCA
* * * * * * *
36795 TACCTTCGAGCAGTTTTTCAAACATTCAATTCTTGGGAAATCGCATCAATTGTTCTAAATAGATT
65 TTCCTTCGAGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAG-TT
** * * *
36860 GTTGTTTTGTAAACAACTTTTGGTCTTTGAAATAAAAACTTATTTATGTAAGAATTGTTTCTTTC
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTC
* *
36925 TAGGTTCTCGGCCGAACTTTTG
194 TTGGTTCTCGGCCGAACTTTCG
* * * *
36947 AACTTGACAAACTTTTACGAGTTCATTTAT-AGTTTTATTCCTTAAAGTATT-AGAGAGGATCCA
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCA-AGACGATCCA
* ** * * * ** *
37010 TTCCTCCGAGCCGTTTTCCAAACAATCCATGCTCT-GGAAATCATATCATTTCGT-TCAAATAGT
65 TTCCTTCGAGCAATTTTTCATACATTCCATGCT-TGGGAAATCGCATCATTTGGTCT-AAATAGT
* * * * * * * *
37073 TGTAATTTTATAAACAACTTTTGGTATTTGAATTAAAAACTTATTCAGGTGATAATAGTTCCTCT
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTT
** *
37138 CTAAGTTCTCGGCAGAACTTTCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * ** * *
37161 AACTTGACAAACATTTACGAGTTATTTTTTAACTTGGGTTCCTAAAAGTATTCAAGATGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * ** * *
37226 TCCTTCGCA-CGATTTTCTGA-ACCTTCCATGCTCGGGAAATCGTTTCAATTGTTCTAAATAGAT
66 TCCTTCG-AGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAG-T
* ** ** * *
37289 TGTCATTTTGTAAACAAC-TTTGGTCTTTAAATTAAAAGGTTATTTACATGAGAATTATTTCTTA
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTT
*
37353 CTTGGTTCTCGGTCGAACTTTCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * *
37376 AATTTGACAAACTTTTACGAGTTCTTTTATAACTTTTACAAGTT-CTT-ACGTGA--GAATA-GT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTT----GTTCCTTAAAGT-ATTCAAGACG-
** * * * * * ** ** ** *
37436 TACTCTC-TTGGTTCTAGGCTGCA-CTTTCGA-A-GTTAACAAACTG-TTACGACTTCTTTTATA
60 -A-TC-CATTCCTTCGA-GC--AATTTTTC-ATACATT--C-CA-TGCTTGGGAAATC--GCATC
* * * * * * ** ** *
37496 ACTTCGGTTCCTTACAGTA-TTCAAGACGATCCTTCG--AGCAATTTTCTGAACATTCCAAGCTC
112 A-TTTGG-T-C-TA-AATAGTT---GTC-AT--TTTGTAAACAACTTT-TGGTC-TTTGAA--TT
* * * * ***** * ** **
37558 AGGAAATCGCATCATTT-GGTCTA-AATAGTTGTCATTT-TATAAAAAAAT-TGTTGGTCTTT-G
162 A--AAA--AC-TTATTTAGGT-GAGAATTGTT-TC-TTTCT-T--GGTTCTCGGCCGAACTTTCG
* * * * ** * * ** * *
37618 AA-TTAAAAAACTTATTTAGGTGATAATAGTTTCT--CTTTAGGTT-CTGGGCCGAACT-TTCGA
1 AACTTGACAAAC-T-TTTACGAG-T--TCTTTTATAACTTT-TGTTCCT----TAAAGTATTCAA
* * ** * * * ** ***
37678 -AC-TTCAAAAACCTTTACGAGTTC-CTTTTTAACTTCAATTCCTTTAATTATTCAACACAATC-
56 GACGATC-CATTCC-TT-CGAG--CAATTTTTCA-TAC-ATTCC----ATGCTT-GGGA-AATCG
* * * * ** * * *
37739 TATACCTTCGAG-C-AATTTTTTGAACATTCCATTCTCAGGAA-ATCACATAAATTGGTC--T-A
108 CAT-CATTTG-GTCTAAATAGTTG-TCATT---TTGT-A--AACA--AC-T--TTTGGTCTTTGA
* * *** * * * * * ** * *** * ** ** *
37798 AATAGATTGTCATTT-TGTAAACAACT-TTT-GGTCTTTGAATTAAAGACTTATTTATGTAAG
159 ATTAAAAACTTATTTAGGT-GAGAATTGTTTCTTTC-TTG-GTTCTCGGCCGAACT-T-T-CG
*** ** ** * * *
37858 AA-TTG--TTTCTTTCTA-G-GTTCTGGGTCGAACTTTCGAACTTGACAAACTTTTATGAGTTCT
1 AACTTGACAAACTTT-TACGAGTTCT-TTTATAACTTTTG---TT--C---C--TTA-AAG-T-A
* * * * * * * * **
37918 TTTATA-ACTTAT--ATTCCTT--A--AAGTATTCAAGACGA-TCCATTCCTCCCGGCCATTTTC
51 TTCA-AGAC-GATCCATTCCTTCGAGCAATTTTTC-ATAC-ATTCCA-TGCT--TGG-GA-AAT-
* * * * * * * *
37975 CGAACAATCCA--TGCTCTGGAAATTG-TATCATTTGGT--TCAAATAGTT-GTCATTT-TA-TA
106 CG--C-AT-CATTTGGTCT--AAATAGTTGTCATTTTGTAAACAACT-TTTGGTC-TTTGAATTA
* * * * * * * * ** *
38032 AACAACTTTTGGTCTTTGAATTAAAAGCTTATTTAGGTGATAATAGTTCCAATCTAGGTTCTCGG
163 AA-AAC--TT-AT-TTAG-GTGAGAA--TTGTTT--CT-TTCTTGGTT-C--TC--GG--C-C-G
**** **
38097 TAGAACTTT
208 -AACTTTCG
* * * * * *
38106 CGAACTTGACAAACATTTAAGAGTTCTTTGT-TGAC-TTCGATTCCTTAAAATATTCAAGATGAT
1 --AACTTGACAAACTTTTACGAGTTCTTT-TATAACTTTTG-TTCCTTAAAGTATTCAAGACGAT
* * * * *
38169 CCATTCCTTCGCA-CAATTTTCCCA-ACATTCCATGCTCGGGAAATCGTATAATTTGTTCTAAAT
62 CCATTCCTTCG-AGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAAT
* * * *
38232 AGATTGGCATTTTGTAAACAACTTTTGGTCTTTAAATTAAAAAGTTATTTATGTGAGAATTGTTT
125 AG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTT
*
38297 CTTTCTTGGTTCTCGGTCGAAC-TTCTG
189 CTTTCTTGGTTCTCGGCCGAACTTTC-G
* * * * *
38324 AACTTGATAAACTTTTACGAGTTGTTTTATAACTTTTATTCCTTAAAGCATTCAAGACAATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
** * * * *
38389 TCCTTCGAGCCGTTTTCTGA-ACAGTCCGTGCTTGGGAAATCACATCATTAT-GTCTAAATAGTT
66 TCCTTCGAGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATT-TGGTCTAAATAGTT
* *
38452 GTCATTTTGTAAACTACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGTGAATTGTTTCTTTC
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTC
** *
38517 TTGGTTCTCGATCGAACTTTCA
194 TTGGTTCTCGGCCGAACTTTCG
**
38539 AACTTGACAAACTTTT--TTGTTC--TT-TAA----TG-----T--A-T-TT-AAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * *
38585 TCCTTCAAGCAATTTTTCGA-ACATTCCATGCTCGAGAAATCGCATCATTTGGTCTAAATAGTTG
66 TCCTTCGAGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * ** *
38649 -CAATTTGTAAACAACTTTT-GTCTTTGAATTAAAAACTTATTTAGGAGAGAATAATTTCTCTCT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* * * * *
38712 TTGTTCACGGTCGAACTTCCA
195 TGGTTCTCGGCCGAACTTTCG
* * * ** * *
38733 AAGTTGACAAACTTTTATGAGTTCTTTTATAACATCGGTTCCATAAATTATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * *
38798 TCCTTCGAGCAATTTTCTGA-ACATTCCATG-TTCGGGAAATCACATCAATTGTTCTAAATAGAT
66 TCCTTCGAGCAATTTT-TCATACATTCCATGCTT-GGGAAATCGCATCATTTGGTCTAAATAG-T
* * * * * * *
38861 TGTCATTTTATAAACAACATTTGGTCTTTGAATTAAAAACTTATATAGGTGATAGTAGTTTCTCT
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTT
* *
38926 CTTGGTTCTCGGCCAAACTTCCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * **
38949 AAGTTGACAAACTTTTATGAGTTCTTTTTTAACTTCGGTTCCTTAAAGTATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * *
39014 TCCTTCGTGCAATTTTTCGA-ACATTCCATG-TTCGGGAAATCGCATCAATTGTTCTAAATAGAT
66 TCCTTCGAGCAATTTTTC-ATACATTCCATGCTT-GGGAAATCGCATCATTTGGTCTAAATAG-T
* * * * * * *
39077 TGTCTTTTTGTAAAAAAAACTTATGTTCTTTAAATTAAAATA-TTATTTATGAGAGAATTGTTT-
128 TGTCATTTTGT--AAACAACTTTTGGTCTTTGAATTAAAA-ACTTATTTAGGTGAGAATTGTTTC
* *
39140 TTTCTTTGTTCTCGGTCGAACTTTCG
190 TTTCTTGGTTCTCGGCCGAACTTTCG
* * * * **** * *
39166 AACTTGACAAACTGTTACGAATTCTTCTATAACATCAAATCATTAAAGTATTTAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* ** * *** *
39231 TCCTTCGCA-CAATTTTCCGA-ACATTCCATGCTCAGGAATTTAAATCATATGGTCTAAATAGTT
66 TCCTTCG-AGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTT
* * * * * ** * * * *
39294 CTCATTTTATAAACAAATTTTGGTCTTTGAATTAAAAACATATTTAAGTGTTAGTAGTTCCTCTC
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTC
* *
39359 TTGGTTCTCAGCCAAACTTTCG
194 TTGGTTCTCGGCCGAACTTTCG
* * * ** * *
39381 AAGTTGACAAAATTTTACGAGTTCTTTTTTAACTTCAGTTCCATAAAGTATTCAACACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* *** * * * *
39446 TCCTTCAAGCAATTTTTCGA-ACATTTTGTGCTTGGGAAATCGCATAAATTGTTCCAAATAGATT
66 TCCTTCGAGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAG-TT
* * * * *
39510 GTCATTTCGTAAACAACTTTTGGCCTTTGAA-TAAAAATGTTATTTATGTGAGAATTGTTTCTCT
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAA-CTTATTTAGGTGAGAATTGTTTCTTT
*
39574 CTTGGTTCTCGGCCGAACTTCCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * * *
39597 AACTTGACAAACTTTAACGAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAGGAAGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* ** * * * *
39662 TCTTTCGAGCAATTTCCCATACAGTCCATGCTTGGGAGATCACATCATTAGGTCTAAATAGTTGT
66 TCCTTCGAGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTGT
* *
39727 CATTTTTTAAACTACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTT-T
131 CATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCT-TTCT
* * *
39791 CGGTTCTCGGTCGAACTTCCG
195 TGGTTCTCGGCCGAACTTTCG
* * * * *
39812 AACTAGAAAAACTTTTACGAGTTCTTTTATAAC-TTTGATTCCTTAAACTATTCAAGATGATCCC
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCA
* * * * *
39876 TTCCTTCGAGCAA-TTTTAAGAGCATTCCATGCTCT-AGAAATCGCATCATTTAGTCTGAATAGT
65 TTCCTTCGAGCAATTTTTCATA-CATTCCATGCT-TGGGAAATCGCATCATTTGGTCTAAATAGT
* * * *
39939 TGCCATTATGTATACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTT-TTC
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTT-
* * *
40003 TCTTGGTTCTAGGCCGAACATCCG
192 TCTTGGTTCTCGGCCGAACTTTCG
* * ** * *
40027 AAGTTGACAAACTTTTACGAGTTCTTTTATAAGTTCGGTTCCTTAAAGTATTCAAGACAAACCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * *
40092 TCCTTCGAGCAATTTTCTGA-ACATTCCAAGCTTAGGAAATCTCATCATTTGGTCTAAATAGTTG
66 TCCTTCGAGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * * *
40156 TCGTTTTGTAAACAACTTTTGGTCTTT-ATATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTC
130 TCATTTTGTAAACAACTTTTGGTCTTTGA-ATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTC
* * *
40220 TTGGTTCTCGGTCGATC-TTCA
194 TTGGTTCTCGGCCGAACTTTCG
* *
40241 AACTTGACAAACTTTTACAAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * *
40306 TCCTTCGAGCAATTTTCTGA-ACAGTCCATGCTTGGAAAATCACATCATTAGGTCTAAATAGTTG
66 TCCTTCGAGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * *
40370 TCATTTTGTAAACAACTTTTGGTTTTTGAATTAAAAACTTATTTAGGTGAGAATTATTTCTCTCT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* * *
40435 TGGTTCTCGACCAAACTTCCG
195 TGGTTCTCGGCCGAACTTTCG
* * ** *
40456 AACTTGACTAACTTTTAAGAGTTCTTTTATAACTTCGGTTCCTTAAAGTAATCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * *
40521 TCCTTCAAGCAATTTTTTGA-ACATTCCATGCTCT-AGAAATCGCATCATTTGGTCTAAATAGTT
66 TCCTTCGAGCAA-TTTTTCATACATTCCATGCT-TGGGAAATCGCATCATTTGGTCTAAATAGTT
* ** *
40584 GTTATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAATTTCTCTC
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTC
* *
40649 TTGGTTCTGGGCCGAACTGTCG
194 TTGGTTCTCGGCCGAACTTTCG
* * *
40671 AAGTTGACAAACTTTTACGAGTTCTTTTATAAC-TTTGATTCCTTAAAGTATTTAAGACGAGCCA
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCA
* * * *
40735 TTCCTTCGAGGAATTTTTCGA-ACATTTCGTGCTT-GGAAATCGTATCATTTGGTCTAAATAGTT
65 TTCCTTCGAGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTT
* * * *
40798 GTCATTTTGTAAATAACTTTTGGTCTTTGAATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTC
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTC
* * *
40863 ATGGTTCTCGACC-AATCTTT-A
194 TTGGTTCTCGGCCGAA-CTTTCG
* * * * * *
40884 AACTTGACAAA-ATTTCCAAGTTCTTTTATAAATTTT-TTCATTATAGTATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * * *
40947 TCCTTC-AGCAATTTATT-GTACAGTCCATGCTTGGGAAATCACATTATTAGGTCTAAATTGTTG
66 TCCTTCGAGCAATTT-TTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * * * * * * *
41010 TCATTCTGTAAACTACTTTTGTTTTTTCAATT-AAAACTTATTAAGGTGAGAATTGTTTCTCTAT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* * ** *
41074 TGGTTCACAGTTGAACTTCCG
195 TGGTTCTCGGCCGAACTTTCG
* * * *
41095 AACTTGACAAACTTTTACGAGTTCTTTTTTAACTTTTGTTCCTTATAGAATTCAAGACTATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* ** * * * * *
41160 TCCTTCGAGCAATTCTTT-A-ACAATTCCATGCTCGGGAAATCAAATTAATTGTTTTAAATATAT
66 TCCTTCGAGCAATT-TTTCATAC-ATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATA-GT
* * * * * * * ****
41223 TGTCATTTTGAAAATAGAAGTTAT--T-TATG--TT-AGAA-TTATTT--CT-TTCTTTG-TTCT
128 TGTCATTTTG-TAA-ACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCT
* * * **
41277 ATGTT-GTACT--TTCGAACTTGTC-
191 TTCTTGGTTCTCGGCCGAACTT-TCG
* * * * * * ** *
41299 AAGCTTTAACAAGTTCTTTTA-TA--ACTTTTGT-TCGTTAAAGTAT--TCAAGACGATCCATTC
1 AA-C-TTGACAA--ACTTTTACGAGTTCTTTTATAAC-TT-TTGT-TCCTTAA-A-G-T--ATTC
** * * *** * * * *
41358 -ATTCGAGCAATT--TTC---C-ATACAGTC--A-ATG-CA----TGGGAAATCACATCACTAGG
54 AAGACGATCCATTCCTTCGAGCAAT-TTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGG
* * * *
41408 TCTAAATAGTTGTCATTTTTTAAACTACTTTTTGTCTTTGAATTAAGAACTTATTTAGGTGAGAA
118 TCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAA
* ****
41473 TTGTTTCTCTT-TCGGTTCTCGATATAACTTTCG
183 TTGTTTCT-TTCTTGGTTCTCGGCCGAACTTTCG
* * * *
41506 AACTTGAAAAACTTTTACGAGTTCTTTTATAAC-TTTGATTCCTTAAACTATTCAAGATGATCCC
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCA
* * * * * *
41570 TTCCTTCGAGCAA-TTTTAAGAGCATTCCATGCTCT-AGAAATCGCTTCATTTAGTCTGAATAGT
65 TTCCTTCGAGCAATTTTTCATA-CATTCCATGCT-TGGGAAATCGCATCATTTGGTCTAAATAGT
* * *
41633 TGTCATTATGTATACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAGTTT-TTC
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTT-
* * *
41697 TCTTGGTTCTAGGCCGAACATCCG
192 TCTTGGTTCTCGGCCGAACTTTCG
* * ** * * * *
41721 AAGTTGACAAACTTTTACGAGTTCTTTTACAACTTCGGCTCCTTAAAGTATCCAAGACAAACCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * *
41786 TCCTTCGAGCAATTTTCTGA-ACATTCCAAGCTT-AGAAATCTCATCATTTGGTCTAAATAGTTG
66 TCCTTCGAGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* ** *
41849 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTAAGAATAATTTCTCTCT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* *
41914 TGGTTCTGGGCCGAACTGTCG
195 TGGTTCTCGGCCGAACTTTCG
* * * *
41935 AAGTTGACAAACTTTTAACGAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAGGACAATCCA
1 AACTTGACAAACTTTT-ACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCA
* ** * * * * *
42000 TTCTTTCGAGCAATTTCCCATACAGTCCATGCTTGGGAGATCACATCATTAGATCTAAATAGTTG
65 TTCCTTCGAGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* *
42065 TCATTTTTTAAACTACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTT-
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCT-TTC
* *
42129 TTGGTTCTCGGTCGAACTTCCG
194 TTGGTTCTCGGCCGAACTTTCG
* * * *
42151 AACTTGAAAAACTTTTACGAGTTCTTTTATAAC-TTTGATTCCTTAAACTATTCAAGATGATCCC
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCA
* * * * *
42215 TTCCTTCGAGCAA-TTTTAAGAGCATTCCATGCTCT-AGAAATCGCATCATTTAGTCTGAATAGT
65 TTCCTTCGAGCAATTTTTCATA-CATTCCATGCT-TGGGAAATCGCATCATTTGGTCTAAATAGT
* * * * *
42278 TGCCATTATGTATACAACTTTTGGTCTTTGAATTAAATACTTATTTAGGTGAGAATAGTTT-TTC
128 TGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTT-
* * *
42342 TCTTGGTTCTAGGCCGAACATCCG
192 TCTTGGTTCTCGGCCGAACTTTCG
* ** * *
42366 AAGTTGACAAACTTTTACGAGTTCTTTTATAACTTCGGTTCCTTAAAGTATTCAAGACAAACCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * *
42431 TCCTTCGAGCAA-TTTTCTGTACATTCCAAGCTTAGGAAATCTCATAATTTGGTCTAAATAGTTG
66 TCCTTCGAGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * * *
42495 TCATTTTGTAAACAACTTTTGGTCTTTAAATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* *
42560 TGGTTCTCGGTCGAACTTT-A
195 TGGTTCTCGGCCGAACTTTCG
* *
42580 AACTTGACAAACTTTTACAAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * *
42645 TCCTTCGAGCAATTTTCTGA-ACAGTCCATGCTTGGAAAATCACATCATTAGGTCTAAATAGTTG
66 TCCTTCGAGCAATTTT-TCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * *
42709 TCATTTTGTAAACAACTTTTGGTTTTTGAATTAAAAACTTATTTAGGTGAGAATTATTTCTCTCT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* * *
42774 TGGTTCTCGACCAAACTTCCG
195 TGGTTCTCGGCCGAACTTTCG
* * ** *
42795 AACTTGACTAACTTTTAAGAGTTCTTTTATAACTTCGGTTCCTTAAAGTAATCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * *
42860 TCCTTCAAGCAATTTTTTGA-ACATTCCATGCTCT-AGAAATCGCATCATTTGGTCTAAATAGTT
66 TCCTTCGAGCAA-TTTTTCATACATTCCATGCT-TGGGAAATCGCATCATTTGGTCTAAATAGTT
* * **
42923 GTTATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAG-ATTAATTTCACT
129 GTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATT-GTTTCTTT
* * *
42987 CTTGGTTCTGGGCCAAACATTCG
193 CTTGGTTCTCGGCCGAACTTTCG
* * *
43010 AAGTTGACAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTTAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * *
43075 TCCTCCGAGCAATTTTTCGA-ACATTCCATGCTT-GGAAATCGTATCATTTGGTCTAAATTGTTG
66 TCCTTCGAGCAATTTTTC-ATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * * *
43138 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCA
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
* *
43203 TGGTTCTCGACC-AATCTTT-A
195 TGGTTCTCGGCCGAA-CTTTCG
* * * * * *
43223 AACTTGACAAA-ATTTCCAAGTTCTTTTATAAATTTT-TTCATTATAGTATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * * * *
43286 TCCTTC-AGCAATTTATT-GTACAGTCCATGCTTGGGAAATCACATTATTAGGTCTAAATTGTTG
66 TCCTTCGAGCAATTT-TTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * * * * * * * *
43349 TTATTCTGTAAGCTACATTTGGTTTTTCAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTAT
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCT
** * * *
43414 TGGTTCTTAGTCAAACTTCCG
195 TGGTTCTCGGCCGAACTTTCG
* * * *
43435 AACTTGACAAACTTTTACGAGTTCTTTTTTAACTTTTGTACCTTATAGAATTCAAGACGATCCAT
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
* * * ** * * *
43500 TCCTTCAAGCAATTTTTTAAACATTCCATGCTCAGGAAATCGCATCACTTGTTCTAAATAGATTA
66 TCCTTCGAGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAG-TTG
* * * * * * * *
43565 TCATTTGGTAAAAAAAAAGTTTT--T-TATG--TT-AGAA-TTGTTT--CT-----TTCTTT-TT
130 TCATTTTGT---AAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTT
* ** **
43615 TCTCGGTTGAACTTCCGAAC-TT-G
192 TCTTGGTT-CTCGGCCGAACTTTCG
* *
43638 ------ACAAACTTTAACGAGTTCTTTTATAACTTTTGTTCAC-TAAAGTATTCAGGACGATCCA
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTC-CTTAAAGTATTCAAGACGATCCA
** * * * *
43696 TT-CTTCGAGCAATTTCCCATACAGTCCATGCTTGGGAGATCACATCATTAGGTCTAAATAGTTG
65 TTCCTTCGAGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTG
* * *
43760 TCATTTTTTAAACTACTTTTGGTTTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTT-
130 TCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCT-TTC
* *** *
43824 TCGGTTCTCGGTATAACTTTCA
194 TTGGTTCTCGGCCGAACTTTCG
* * * *
43846 AACTTGAAAAACTTTTACGAGTTCTTTTATAAC-TTTGATTCCTTAAACTATTCAAGATGATCCC
1 AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTG-TTCCTTAAAGTATTCAAGACGATCCA
43910 TTCCTTCGAGCAATTTT
65 TTCCTTCGAGCAATTTT
43927 AAG
Statistics
Matches: 7872, Mismatches: 1634, Indels: 953
0.75 0.16 0.09
Matches are distributed among these distances:
192 8 0.00
193 5 0.00
194 74 0.01
195 42 0.01
196 136 0.02
197 56 0.01
198 8 0.00
199 13 0.00
200 8 0.00
201 8 0.00
202 7 0.00
203 16 0.00
204 30 0.00
205 34 0.00
206 35 0.00
207 32 0.00
208 69 0.01
209 125 0.02
210 167 0.02
211 319 0.04
212 84 0.01
213 311 0.04
214 1036 0.13
215 3135 0.40
216 1418 0.18
217 193 0.02
218 49 0.01
219 16 0.00
220 5 0.00
221 2 0.00
222 6 0.00
223 4 0.00
224 3 0.00
225 4 0.00
226 1 0.00
227 4 0.00
228 10 0.00
229 7 0.00
230 6 0.00
231 14 0.00
232 3 0.00
233 15 0.00
234 17 0.00
235 13 0.00
236 30 0.00
237 20 0.00
238 35 0.00
239 16 0.00
240 24 0.00
241 43 0.01
242 18 0.00
243 28 0.00
244 21 0.00
245 20 0.00
246 15 0.00
247 11 0.00
248 8 0.00
249 6 0.00
250 7 0.00
251 4 0.00
252 6 0.00
253 6 0.00
254 6 0.00
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.40
Consensus pattern (215 bp):
AACTTGACAAACTTTTACGAGTTCTTTTATAACTTTTGTTCCTTAAAGTATTCAAGACGATCCAT
TCCTTCGAGCAATTTTTCATACATTCCATGCTTGGGAAATCGCATCATTTGGTCTAAATAGTTGT
CATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTT
GGTTCTCGGCCGAACTTTCG
Found at i:40620 original size:429 final size:427
Alignment explanation
Indices: 38553--43926 Score: 5617
Period size: 429 Copynumber: 12.6 Consensus size: 427
38543 TGACAAACTT
* * * * *
38553 TTTTGTTCTTTAATGTATTTAAGACGATCCATTCCTTCAAGCAATTTTTCGAACATTCCATGCTC
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGCTT
* * *
38618 GAGAAATCGCATCATTTGGTCTAAATAGTTG-CAATTTGTAAACAACTTTT-GTCTTTGAATTAA
65 GGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAA
* ** * * * *
38681 AAACTTATTTAGGAGAGAATAATTTCTCTCTTTGTTCACGGTCGAACTTCCAAAGTTGACAAACT
130 AAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAAACT
* * * * *
38746 TTTATGAGTTCTTTTATAACATCGGTTCCATAAATTATTCAAGACGATCCATTCCTTCGAGCAAT
195 TTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
* * *
38811 TTTCTGAACATTCCATG-TTCGGGAAATCACATCAATTGTTCTAAATAGATTGTCATTTTATAAA
260 TTTCTGAACATTCCATGCTT--GGAAATCACATCATTTGGTCTAAATAG-TTGTCATTTTGTAAA
* * * * * *
38875 CAACATTTGGTCTTTGAATTAAAAACTTATATAGGTGATAGTAGTTTCTCTCTTGGTTCTCGGCC
322 CAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGGCC
* * * *
38940 AAACTTCCGAAGTTGACAAACTTTTATGAGTTCTTTTTTAAC
387 GAACTT-CGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
** *
38982 TTCGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGTGCAATTTTTCGAACATTCCATG-TT
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGCTT
* * * * * *
39046 CGGGAAATCGCATCAATT-GTTCTAAATAGATTGTCTTTTTGTAAAAAAAACTTATGTTCTTTAA
65 -GGGAAATCGCATC-ATTAGGTCTAAATAG-TTGTCATTTTGT--AAACAACTTTTGGTCTTTGA
* * * * *
39110 ATTAAAATA-TTATTTATGAGAGAATTGTTT-TTTCTTTGTTCTCGGTCGAACTTTCGAACTTGA
125 ATTAAAA-ACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGA
* * * * **** * *
39173 CAAACTGTTACGAATTCTTCTATAACATCAAATCATTAAAGTATTTAAGACGATCCATTCCTTCG
189 CAAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCG
* * * * * * *
39238 CA-CAATTTTCCGAACATTCCATGCTCAGGAATTTAAATCATATGGTCTAAATAGTTCTCATTTT
254 -AGCAATTTTCTGAACATTCCATGCT-TGGAAATCACATCATTTGGTCTAAATAGTTGTCATTTT
* * * * ** * * * *
39302 ATAAACAAATTTTGGTCTTTGAATTAAAAACATATTTAAGTGTTAGTAGTTCCTCTCTTGGTTCT
317 GTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCT
* * * * *
39367 CAGCCAAACTTTCGAAGTTGACAAAATTTTACGAGTTCTTTTTTAAC
382 CGGCCGAAC-TTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
** * * * ***
39414 TTCAGTTCCATAAAGTATTCAACACGATCCATTCCTTCAAGCAATTTTTCGAACATTTTGTGCTT
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGCTT
* * * * *
39479 GGGAAATCGCATAAATT-GTTCCAAATAGATTGTCATTTCGTAAACAACTTTTGGCCTTTGAA-T
65 GGGAAATCGCAT-CATTAGGTCTAAATAG-TTGTCATTTTGTAAACAACTTTTGGTCTTTGAATT
* * *
39542 AAAAATGTTATTTATGTGAGAATTGTTTCTCTCTTGGTTCTCGGCCGAACTTCCGAACTTGACAA
128 AAAAA-CTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAA
* * * * * *
39607 ACTTTAACGAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAGGAAGATCCATTCTTTCGAGC
192 ACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC
** * * * *
39672 AA-TTTCCCATACAGTCCATGCTTGGGAGATCACATCATTAGGTCTAAATAGTTGTCATTTTTTA
257 AATTTTCTGA-ACATTCCATGCTT-GGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTA
* *
39736 AACTACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTCTT-TCGGTTCTCG
320 AACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCT-TTCTTGGTTCTCG
* * *
39800 GTCGAACTTCCGAACTAGAAAAACTTTTACGAGTTCTTTTATAAC
384 GCCGAACTT-CGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
* * * * *
39845 -TTTGATTCCTTAAACTATTCAAGATGATCCCTTCCTTCGAGCAATTTTAAGAGCATTCCATGCT
1 TTTTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTT-TGAACATTCCATGCT
* * * * *
39909 CT-AGAAATCGCATCATTTA-GTCTGAATAGTTGCCATTATGTATACAACTTTTGGTCTTTGAAT
64 -TGGGAAATCGCATCA-TTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAAT
* * * * * *
39972 TAAAAACTTATTTAGGTGAGAATAGTTTTTCTCTTGGTTCTAGGCCGAACATCCGAAGTTGACAA
127 TAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAA
* * * *
40037 ACTTTTACGAGTTCTTTTATAAGTTCGGTTCCTTAAAGTATTCAAGACAAACCATTCCTTCGAGC
192 ACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC
* * *
40102 AATTTTCTGAACATTCCAAGCTTAGGAAATCTCATCATTTGGTCTAAATAGTTGTCGTTTTGTAA
257 AATTTTCTGAACATTCCATGCTT-GGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAA
* * *
40167 ACAACTTTTGGTCTTT-ATATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCTTGGTTCTCGG
321 ACAACTTTTGGTCTTTGA-ATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGG
* * * *
40231 TCGATCTTCAAACTTGACAAACTTTTACAAGTTCTTTTATAAC
385 CCGAACTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
* *
40274 TTTTGTTCATTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTCTGAACAGTCCATGCTT
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTT-TGAACATTCCATGCTT
* * *
40339 GGAAAATCACATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTTTTTGAATTAA
65 GGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAA
* ** * *
40404 AAACTTATTTAGGTGAGAATTATTTCTCTCTTGGTTCTCGACCAAACTTCCGAACTTGACTAACT
130 AAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAAACT
* * * *
40469 TTTAAGAGTTCTTTTATAACTTCGGTTCCTTAAAGTAATCAAGACGATCCATTCCTTCAAGCAAT
195 TTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
* * * *
40534 TTTTTGAACATTCCATGCTCTAGAAATCGCATCATTTGGTCTAAATAGTTGTTATTTTGTAAACA
260 TTTCTGAACATTCCATGCT-TGGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAAACA
** * *
40599 ACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATAATTTCTCTCTTGGTTCTGGGCCGA
324 ACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGGCCGA
*
40664 ACTGTCGAAGTTGACAAACTTTTACGAGTTCTTTTATAAC
389 ACT-TCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
* * * * *
40704 -TTTGATTCCTTAAAGTATTTAAGACGAGCCATTCCTTCGAGGAATTTTTCGAACATTTCGTGCT
1 TTTTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGCT
* * *
40768 T-GGAAATCGTATCATTTGGTCTAAATAGTTGTCATTTTGTAAATAACTTTTGGTCTTTGAATTA
64 TGGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTA
* * * * * * * **
40832 AAAAATTCTTTATGTGAGAATTGTTTCTTTCATGGTTCTC-GACCAATCTT-TAAACTTGACAAA
129 AAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAA-CTTCCGAACTTGACAAA
* * * * * * *
40895 -ATTTCCAAGTTCTTTTATAAATTT-TTTCATTATAGTATTCAAGACGATCCATTCCTTC-AGCA
193 CTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCA
* * * * * *
40957 ATTTAT-TGTACAGTCCATGCTTGGGAAATCACATTATTAGGTCTAAATTGTTGTCATTCTGTAA
258 ATTT-TCTGAACATTCCATGCTT-GGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAA
* * * * * * * * * *
41021 ACTACTTTTGTTTTTTCAATT-AAAACTTATTAAGGTGAGAATTGTTTCTCTATTGGTTCACAGT
321 ACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGGC
* *
41085 TGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTTTAAC
386 CGAACTT-CGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
* * *
41128 TTTTGTTCCTTATAGAATTCAAGACTATCCATTCCTTCGAGCAATTCTTT-AACAATTCCATGCT
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATT-TTTGAAC-ATTCCATGCT
* * *
41192 CGGGAAAT--CA--A--A--T-T--A-A-TTG----TTT-TAAA-TA-TATT-GTCATTTTGAA-
64 TGGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTC--TTTGAAT
* * * * * * ** * * * *
41235 -AATAGAAGTTATTTATGTTAGAATTATTTCTTTCTTTGTTCTATGTTGTACTTTCGAACTTGTC
127 TAA-A-AACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGAC
* * * * * *
41299 AAGCTTTAACAAGTTCTTTTATAACTTTTGTTCGTTAAAGTATTCAAGACGATCCATTCATTCGA
190 AAACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGA
* * * * * * *
41364 GCAATTTTC-CATACAGTCAATGCATGGGAAATCACATCACTAGGTCTAAATAGTTGTCATTTTT
255 GCAATTTTCTGA-ACATTCCATGC-TTGGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTG
* * * *
41428 TAAACTACTTTTTGTCTTTGAATTAAGAACTTATTTAGGTGAGAATTGTTTCTCTT-TCGGTTCT
318 TAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCT-TTCTTGGTTCT
**** *
41492 CGATATAACTTTCGAACTTGAAAAACTTTTACGAGTTCTTTTATAAC
382 CGGCCGAAC-TTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
* * * * *
41539 -TTTGATTCCTTAAACTATTCAAGATGATCCCTTCCTTCGAGCAATTTTAAGAGCATTCCATGCT
1 TTTTG-TTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTT-TGAACATTCCATGCT
* * * * *
41603 CT-AGAAATCGCTTCATTTA-GTCTGAATAGTTGTCATTATGTATACAACTTTTGGTCTTTGAAT
64 -TGGGAAATCGCATCA-TTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAAT
* * * * * *
41666 TAAAAACTTATTTAGGTGAGAATAGTTTTTCTCTTGGTTCTAGGCCGAACATCCGAAGTTGACAA
127 TAAAAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAA
* * * * * *
41731 ACTTTTACGAGTTCTTTTACAACTTCGGCTCCTTAAAGTATCCAAGACAAACCATTCCTTCGAGC
192 ACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC
* * *
41796 AATTTTCTGAACATTCCAAGCTTAGAAATCTCATCATTTGGTCTAAATAGTTGTCATTTTGTAAA
257 AATTTTCTGAACATTCCATGCTTGGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAAA
* ** * *
41861 CAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTAAGAATAATTTCTCTCTTGGTTCTGGGCC
322 CAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGGCC
*
41926 GAACTGTCGAAGTTGACAAACTTTTAACGAGTTCTTTTATAAC
387 GAACT-TCGAACTTGACAAACTTTT-ACGAGTTCTTTTATAAC
* * * * *** *
41969 TTTTGTTCATTAAAGTATTCAGGACAATCCATTCTTTCGAGCAATTTCCCATACAGTCCATGCTT
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTGA-ACATTCCATGCTT
* * * * *
42034 GGGAGATCACATCATTAGATCTAAATAGTTGTCATTTTTTAAACTACTTTTGGTCTTTGAATTAA
65 GGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAA
* *
42099 AAACTTATTTAGGTGAGAATTGTTTCTCTTTTGGTTCTCGGTCGAACTTCCGAACTTGAAAAACT
130 AAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAAACT
* * * *
42164 TTTACGAGTTCTTTTATAACTTTGATTCCTTAAACTATTCAAGATGATCCCTTCCTTCGAGCAAT
195 TTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
** * * * * * * * *
42229 TTTAAGAGCATTCCATGCTCTAGAAATCGCATCATTTAGTCTGAATAGTTGCCATTATGTATACA
260 TTTCTGAACATTCCATGCT-TGGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAAACA
* * *
42294 ACTTTTGGTCTTTGAATTAAATACTTATTTAGGTGAGAATAGTTT-TTCTCTTGGTTCTAGGCCG
324 ACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTT-TCTTGGTTCTCGGCCG
* *
42358 AACATCCGAAGTTGACAAACTTTTACGAGTTCTTTTATAAC
388 AAC-TTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
** * * * *
42399 TTCGGTTCCTTAAAGTATTCAAGACAAACCATTCCTTCGAGCAATTTTCTGTACATTCCAAGCTT
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTT-TGAACATTCCATGCTT
* * * * *
42464 AGGAAATCTCATAATTTGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTAAATTAA
65 GGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAA
* * * * **
42529 AAAATTCTTTATGTGAGAATTGTTTCTTTCTTGGTTCTCGGTCGAACTT-TAAACTTGACAAACT
130 AAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAAACT
* * *
42593 TTTACAAGTTCTTTTATAACTTTTGTTCATTAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
195 TTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
* *
42658 TTTCTGAACAGTCCATGCTTGGAAAATCACATCATTAGGTCTAAATAGTTGTCATTTTGTAAACA
260 TTTCTGAACATTCCATGCTTGG-AAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAAACA
* * * * *
42723 ACTTTTGGTTTTTGAATTAAAAACTTATTTAGGTGAGAATTATTTCTCTCTTGGTTCTCGACCAA
324 ACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGGCCGA
* *
42788 ACTTCCGAACTTGACTAACTTTTAAGAGTTCTTTTATAAC
389 ACTT-CGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
** * *
42828 TTCGGTTCCTTAAAGTAATCAAGACGATCCATTCCTTCAAGCAATTTTTTGAACATTCCATGCTC
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAA-TTTTTGAACATTCCATGCT-
* * *
42893 T-AGAAATCGCATCATTTGGTCTAAATAGTTGTTATTTTGTAAACAACTTTTGGTCTTTGAATTA
64 TGGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTA
* * * * * *
42957 AAAACTTATTTAGGTGAG-ATTAATTTCACTCTTGGTTCTGGGCCAAACATT-CGAAGTTGACAA
129 AAAACTTATTTAGGTGAGAATT-GTTTCTCTCTTGGTTCTCGGTCGAAC-TTCCGAACTTGACAA
* *
43020 ACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTTAAGACGATCCATTCCTCCGAGC
192 ACTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGC
** *
43085 AATTTT-TCGAACATTCCATGCTTGGAAATCGTATCATTTGGTCTAAATTGTTGTCATTTTGTAA
257 AATTTTCT-GAACATTCCATGCTTGGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAA
* * * * *
43149 ACAACTTTTGGTCTTTGAATTAAAAAATTCTTTATGTGAGAATTGTTTCTTTCATGGTTCTCGAC
321 ACAACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGGC
** * * * *
43214 C-AATCTTTAAACTTGACAAA-ATTTCCAAGTTCTTTTATAAA
386 CGAA-CTTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
* * * *
43255 TTTT-TTCATTATAGTATTCAAGACGATCCATTCCTTC-AGCAATTTATTGTACAGTCCATGCTT
1 TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTT-TTGAACATTCCATGCTT
* * * * * * * * * *
43318 GGGAAATCACATTATTAGGTCTAAATTGTTGTTATTCTGTAAGCTACATTTGGTTTTTCAATTAA
65 GGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAA
* ** *
43383 AAACTTATTTAGGTGAGAATTGTTTCTCTATTGGTTCTTAGTCAAACTTCCGAACTTGACAAACT
130 AAACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAAACT
* * * * * *
43448 TTTACGAGTTCTTTTTTAACTTTTGTACCTTATAGAATTCAAGACGATCCATTCCTTCAAGCAAT
195 TTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAAT
* * * * * * *
43513 TTTTTAAACATTCCATGCTCAGGAAATCGCATCACTTGTTCTAAATA---G--A---T-T-ATC-
260 TTTCTGAACATTCCATGCT-TGGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAAACA
** * * * * ** **
43567 A--TTTGG----T-AAAAAAAAAGTTTTTTATGTTAGAATTGTTTCTTTCTTTTTTCTCGGTTGA
324 ACTTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGGCCGA
*
43625 ACTTCCGAACTTGACAAACTTTAACGAGTTCTTTTATAAC
389 ACTT-CGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
* *** *
43665 TTTTGTTCAC-TAAAGTATTCAGGACGATCCATT-CTTCGAGCAATTTCCCATACAGTCCATGCT
1 TTTTGTTC-CTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTGA-ACATTCCATGCT
* * * * *
43728 TGGGAGATCACATCATTAGGTCTAAATAGTTGTCATTTTTTAAACTACTTTTGGTTTTTGAATTA
64 TGGGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTA
** * * *
43793 AAAACTTATTTAGGTGAGAATTGTTTCTCT-TTCGGTTCTCGGTATAACTTTCAAACTTGAAAAA
129 AAAACTTATTTAGGTGAGAATTGTTTCTCTCTT-GGTTCTCGGTCGAACTTCCGAACTTGACAAA
* * * *
43857 CTTTTACGAGTTCTTTTATAACTTTGATTCCTTAAACTATTCAAGATGATCCCTTCCTTCGAGCA
193 CTTTTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCA
43922 ATTTT
258 ATTTT
43927 AAG
Statistics
Matches: 4151, Mismatches: 670, Indels: 266
0.82 0.13 0.05
Matches are distributed among these distances:
404 5 0.00
405 4 0.00
406 41 0.01
407 15 0.00
408 64 0.02
409 45 0.01
410 103 0.02
411 335 0.08
412 8 0.00
413 7 0.00
414 1 0.00
415 2 0.00
416 3 0.00
417 2 0.00
418 2 0.00
419 1 0.00
420 1 0.00
421 2 0.00
422 1 0.00
423 7 0.00
424 126 0.03
425 281 0.07
426 87 0.02
427 36 0.01
428 41 0.01
429 1117 0.27
430 1017 0.25
431 421 0.10
432 206 0.05
433 136 0.03
434 33 0.01
435 1 0.00
ACGTcount: A:0.29, C:0.17, G:0.14, T:0.40
Consensus pattern (427 bp):
TTTTGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATTTTTGAACATTCCATGCTTG
GGAAATCGCATCATTAGGTCTAAATAGTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAA
AACTTATTTAGGTGAGAATTGTTTCTCTCTTGGTTCTCGGTCGAACTTCCGAACTTGACAAACTT
TTACGAGTTCTTTTATAACTTTGGTTCCTTAAAGTATTCAAGACGATCCATTCCTTCGAGCAATT
TTCTGAACATTCCATGCTTGGAAATCACATCATTTGGTCTAAATAGTTGTCATTTTGTAAACAAC
TTTTGGTCTTTGAATTAAAAACTTATTTAGGTGAGAATTGTTTCTTTCTTGGTTCTCGGCCGAAC
TTCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC
Done.