Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013905.1 Kokia drynarioides strain JFW-HI SEQ_128934, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97681

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4458--4525
31
2.2
31
97
0
127
27
25
2
44
1.68
7922--8118
102
1.9
102
85
2
270
28
16
13
40
1.87
9434--9493
30
2.0
30
83
6
77
13
31
30
25
1.93
13048--13095
23
2.1
23
84
0
60
31
8
20
39
1.82
14864--14928
21
3.0
22
82
4
71
55
0
0
44
0.99
23178--23276
49
2.0
49
92
3
164
27
18
11
43
1.83
24959--25000
21
2.0
21
95
0
75
50
4
14
30
1.63
25272--25326
19
2.8
20
72
8
51
56
5
14
23
1.59
25765--25830
28
2.3
29
86
2
89
18
18
15
48
1.81
26932--27039
55
2.0
55
86
0
153
27
25
14
31
1.95
27678--27731
21
2.6
21
76
5
56
33
25
12
27
1.93
28033--28058
13
2.0
13
100
0
52
30
15
23
30
1.95
28423--28492
25
2.8
25
93
0
113
32
25
18
22
1.97
31893--31956
33
1.9
33
96
0
119
34
9
26
29
1.88
35040--35082
22
1.9
23
85
4
61
48
6
6
37
1.57
35559--35588
16
1.9
15
93
6
51
16
33
0
50
1.46
46325--46349
13
1.9
13
100
0
50
48
12
16
24
1.79
46686--46729
19
2.5
17
88
7
61
6
20
0
72
1.07
54457--54503
17
2.8
17
80
0
58
19
19
12
48
1.80
60330--60361
15
2.1
15
94
0
55
0
31
0
68
0.90
60320--60372
27
2.0
27
84
0
70
1
33
0
64
1.05
60320--60372
12
4.2
12
79
13
52
1
33
0
64
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69787--69828
16
2.7
16
89
10
61
11
30
0
57
1.35
74029--74154
20
6.3
20
75
3
110
12
29
19
38
1.88
75508--75594
38
2.3
38
84
7
106
37
4
8
49
1.53
76052--76078
4
6.8
4
100
0
54
25
0
22
51
1.48
76735--76802
21
3.2
21
62
22
52
20
2
19
57
1.54
76737--76822
42
2.0
42
100
0
172
20
4
18
55
1.60
84184--84256
37
2.0
37
89
5
112
45
15
6
32
1.72
93661--93724
17
3.9
17
74
12
53
59
1
0
39
1.07
93658--93731
32
2.2
33
77
13
80
59
1
0
39
1.06
93830--93908
38
2.0
40
83
9
101
27
2
10
59
1.43
94856--94882
2
13.5
2
100
0
54
51
0
0
48
1.00
95008--95094
17
5.1
17
77
5
86
41
1
2
55
1.20
95007--95098
6
16.0
6
67
17
52
42
1
2
54
1.19
95007--95103
34
2.8
34
83
6
115
42
1
2
54
1.19
95075--95117
18
2.4
18
88
3
61
48
4
0
46
1.22
95007--95117
34
3.2
34
79
6
91
44
1
1
52
1.22
96922--97146
58
3.9
58
83
5
276
34
30
3
32
1.73
96922--97150
29
7.9
28
79
9
235
34
30
3
31
1.75
96922--97147
117
1.9
117
85
3
312
34
30
3
31
1.73

Tables:   1

The End!