Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01013911.1 Kokia drynarioides strain JFW-HI SEQ_128941, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 12103
ACGTcount: A:0.34, C:0.19, G:0.19, T:0.27
Warning! 50 characters in sequence are not A, C, G, or T
Found at i:751 original size:19 final size:19
Alignment explanation
Indices: 722--767 Score: 83
Period size: 19 Copynumber: 2.4 Consensus size: 19
712 TTATTTTGCT
722 CTTTAGACTTTCATTTCATC
1 CTTT-GACTTTCATTTCATC
742 CTTTGACTTTCATTTCATC
1 CTTTGACTTTCATTTCATC
761 CTTTGAC
1 CTTTGAC
768 AGATCCCCAA
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
19 22 0.85
20 4 0.15
ACGTcount: A:0.17, C:0.26, G:0.07, T:0.50
Consensus pattern (19 bp):
CTTTGACTTTCATTTCATC
Found at i:4596 original size:24 final size:24
Alignment explanation
Indices: 4546--4596 Score: 84
Period size: 24 Copynumber: 2.1 Consensus size: 24
4536 TGTATACCAA
**
4546 TTATTGTTTCCTTTGATCCTCTTT
1 TTATTGTTTCCTTTGATCCTCCCT
4570 TTATTGTTTCCTTTGATCCTCCCT
1 TTATTGTTTCCTTTGATCCTCCCT
4594 TTA
1 TTA
4597 ATAGAATTTT
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
24 25 1.00
ACGTcount: A:0.10, C:0.24, G:0.08, T:0.59
Consensus pattern (24 bp):
TTATTGTTTCCTTTGATCCTCCCT
Found at i:5465 original size:211 final size:210
Alignment explanation
Indices: 5178--5854 Score: 876
Period size: 211 Copynumber: 3.2 Consensus size: 210
5168 CCGGCTTCAC
* * *
5178 GATGAGACACCGAGAAGCAGGTCGAAACAATAAAAGGTCAGCTTCCTGATGAGATACTAAGAAGT
1 GATGAGACACTGAGAAGCAGGTCGAAGCAATAAAAGGTCAGCTTCCTGATGAGATACTGAGAAGT
* * *
5243 AAACCAAATTCGTTTTCCTAATGAGATACGGAGAAGCGAATTAAAACAAACGATGCGGTCATCTT
66 -AACTAAATTCGTCTTCCTGATGAGATACGGAGAAGCGAATTAAAACAAACGATGCGGTCATCTT
* *
5308 CCTGATGAGATACTAAGAAGAATACCAAATCAAACCCAAACGAGGCTCGAAACGAGCAAAATCTT
130 CCTGACGAGATACTAAGAAGAAGACCAAATCAAACCCAAACGAGGCTCGAAACGAGCAAAATCTT
*
5373 TGAACCCCGGCTTCCT
195 TGAACCCCAGCTTCCT
*
5389 GATGAGACACTGAGAAACAGGTCGAAGCAATAAAAGGTCAGCTTCCTGATGAGATACTGAGAAGT
1 GATGAGACACTGAGAAGCAGGTCGAAGCAATAAAAGGTCAGCTTCCTGATGAGATACTGAGAAGT
* *
5454 GTACTAAATTCGTCTTCCTGATGAGATACGAAGAAGCGAATTAAAACAAACGATGCGGTCATCTT
66 -AACTAAATTCGTCTTCCTGATGAGATACGGAGAAGCGAATTAAAACAAACGATGCGGTCATCTT
5519 CCTGACGAGATAC-AGAGAAGAAGACCAAATCAAACCCAAACGAGGCTCGAAACGAGCAAAATCT
130 CCTGACGAGATACTA-AGAAGAAGACCAAATCAAACCCAAACGAGGCTCGAAACGAGCAAAATCT
* *
5583 TTGAACCCTAGCTTTCT
194 TTGAACCCCAGCTTCCT
* * *
5600 GATGAGACACTAAGAAGCAGGTTGAAGCAATAAAAGGTTAGCTTCCTGATGAGATACTGAGAAGT
1 GATGAGACACTGAGAAGCAGGTCGAAGCAATAAAAGGTCAGCTTCCTGATGAGATACTGAGAAGT
* * * * * * * *
5665 AAATCAAATTCGTCTTCCTGATGAGGTACAGAGAAGCGAATTGAAACGAGCAGCGACGTGATCAT
66 AACT-AAATTCGTCTTCCTGATGAGATACGGAGAAGCGAATTAAAAC-A--AACGATGCGGTCAT
* ** * *
5730 CTTCCTGACAAGACGCTGAGAAGAAGA-C---TCAAA--C--A--AGGCTCGAAACCAGCAAAAT
127 CTTCCTGACGAGATACTAAGAAGAAGACCAAATCAAACCCAAACGAGGCTCGAAACGAGCAAAAT
*
5785 CTTCGAACCCCAGCTTCCT
192 CTTTGAACCCCAGCTTCCT
* * * *
5804 CATGAGACA-TGGGGAAGCAGGTCGAAGCAATAAAA-GTCATCTTCCCGATGA
1 GATGAGACACT-GAGAAGCAGGTCGAAGCAATAAAAGGTCAGCTTCCTGATGA
5855 AAATACCGAG
Statistics
Matches: 415, Mismatches: 44, Indels: 22
0.86 0.09 0.05
Matches are distributed among these distances:
203 14 0.03
204 64 0.15
206 1 0.00
208 1 0.00
210 8 0.02
211 293 0.71
212 1 0.00
213 1 0.00
214 32 0.08
ACGTcount: A:0.38, C:0.21, G:0.22, T:0.19
Consensus pattern (210 bp):
GATGAGACACTGAGAAGCAGGTCGAAGCAATAAAAGGTCAGCTTCCTGATGAGATACTGAGAAGT
AACTAAATTCGTCTTCCTGATGAGATACGGAGAAGCGAATTAAAACAAACGATGCGGTCATCTTC
CTGACGAGATACTAAGAAGAAGACCAAATCAAACCCAAACGAGGCTCGAAACGAGCAAAATCTTT
GAACCCCAGCTTCCT
Found at i:6380 original size:17 final size:17
Alignment explanation
Indices: 6355--6432 Score: 61
Period size: 17 Copynumber: 4.5 Consensus size: 17
6345 CCCAATCAAC
*
6355 TTAAATTTATTTTAAAA
1 TTAAATTTATTCTAAAA
* *
6372 TTAAGTTTATTCTAAAT
1 TTAAATTTATTCTAAAA
* * *
6389 TTAAATTTGGTT-GAAAT
1 TTAAATTT-ATTCTAAAA
6406 TTAAATTTATT-TATAAA
1 TTAAATTTATTCTA-AAA
6423 TTTAAATTTA
1 -TTAAATTTA
6433 AAATTTATTT
Statistics
Matches: 49, Mismatches: 9, Indels: 5
0.78 0.14 0.08
Matches are distributed among these distances:
16 3 0.06
17 35 0.71
18 11 0.22
ACGTcount: A:0.41, C:0.01, G:0.05, T:0.53
Consensus pattern (17 bp):
TTAAATTTATTCTAAAA
Found at i:7124 original size:13 final size:13
Alignment explanation
Indices: 7106--7138 Score: 59
Period size: 12 Copynumber: 2.6 Consensus size: 13
7096 TGAGATTTAT
7106 TATTATTAAAAAA
1 TATTATTAAAAAA
7119 TATTATT-AAAAA
1 TATTATTAAAAAA
7131 TATTATTA
1 TATTATTA
7139 TTAATTAATA
Statistics
Matches: 19, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
12 12 0.63
13 7 0.37
ACGTcount: A:0.55, C:0.00, G:0.00, T:0.45
Consensus pattern (13 bp):
TATTATTAAAAAA
Found at i:7157 original size:28 final size:28
Alignment explanation
Indices: 7103--7157 Score: 65
Period size: 28 Copynumber: 2.0 Consensus size: 28
7093 AAATGAGATT
* **
7103 TATTATTATTAAAAAATATTATTAAAAA
1 TATTATTATTAAAAAATAATAAAAAAAA
**
7131 TATTATTATTAATTAATAATAAAAAAA
1 TATTATTATTAAAAAATAATAAAAAAA
7158 CAAAGAGTCG
Statistics
Matches: 22, Mismatches: 5, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
28 22 1.00
ACGTcount: A:0.58, C:0.00, G:0.00, T:0.42
Consensus pattern (28 bp):
TATTATTATTAAAAAATAATAAAAAAAA
Found at i:7767 original size:12 final size:12
Alignment explanation
Indices: 7750--7774 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
7740 GGGAAAGGGC
7750 GAGAGGATTTTG
1 GAGAGGATTTTG
7762 GAGAGGATTTTG
1 GAGAGGATTTTG
7774 G
1 G
7775 GTTTTTTTAA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.24, C:0.00, G:0.44, T:0.32
Consensus pattern (12 bp):
GAGAGGATTTTG
Found at i:8469 original size:58 final size:59
Alignment explanation
Indices: 8294--8579 Score: 355
Period size: 59 Copynumber: 4.9 Consensus size: 59
8284 CCCCAGATTG
* * * * * * *
8294 TCCAAAAATTATCATTTTA-CCCTCGAGCTTTCAAAAATCTCATTTTTGACCTTGAACCT
1 TCCAAAAATTACCATTTTACCCCT-AAACTTCCAAAAATCCCATTTTTGACCCTAAACCT
* * *
8353 TTCTAAAATTACCATTTTACCCCTAAACTTCCAAAAATCCCATTTTTGACCCCAAACCT
1 TCCAAAAATTACCATTTTACCCCTAAACTTCCAAAAATCCCATTTTTGACCCTAAACCT
* *
8412 TCCAAAAATTACCATTTTA-CCCTAAACTTCCAAAAATCCCATTTTTAACCCTGAACCT
1 TCCAAAAATTACCATTTTACCCCTAAACTTCCAAAAATCCCATTTTTGACCCTAAACCT
* * *
8470 TCCAAATATTACCATTTTATCCCC-AAACTCCCAAAAATCTCATTTTTGACCCTAAACCT
1 TCCAAAAATTACCATTTTA-CCCCTAAACTTCCAAAAATCCCATTTTTGACCCTAAACCT
* * *
8529 TCCAAAAATTACCATTTTACCCCCAAAC-TCCGAAAAATCCCCTTTTCGACC
1 TCCAAAAATTACCATTTTACCCCTAAACTTCC-AAAAATCCCATTTTTGACC
8580 ACGAAACACC
Statistics
Matches: 197, Mismatches: 25, Indels: 10
0.85 0.11 0.04
Matches are distributed among these distances:
58 60 0.30
59 130 0.66
60 7 0.04
ACGTcount: A:0.34, C:0.31, G:0.03, T:0.32
Consensus pattern (59 bp):
TCCAAAAATTACCATTTTACCCCTAAACTTCCAAAAATCCCATTTTTGACCCTAAACCT
Found at i:8498 original size:117 final size:117
Alignment explanation
Indices: 8294--8574 Score: 379
Period size: 117 Copynumber: 2.4 Consensus size: 117
8284 CCCCAGATTG
* * * * * * * *
8294 TCCAAAAATTATCATTTTACCCTCGAGCTTTCAAAAATCTCATTTTTGACCTTGAACCTTTCTAA
1 TCCAAAAATTACCATTTTACCCT-AAACTTCCAAAAATCCCATTTTTAACCCTGAACCTTTCCAA
*
8359 AATTACCATTTTACCCCTAAACTTCCAAAAATCCCATTTTTGACCCCAAACCT
65 AATTACCATTTTACCCCTAAACTCCCAAAAATCCCATTTTTGACCCCAAACCT
8412 TCCAAAAATTACCATTTTACCCTAAACTTCCAAAAATCCCATTTTTAACCCTGAACC-TTCCAAA
1 TCCAAAAATTACCATTTTACCCTAAACTTCCAAAAATCCCATTTTTAACCCTGAACCTTTCCAAA
* *
8476 TATTACCATTTTATCCCC-AAACTCCCAAAAATCTCATTTTTGACCCTAAACCT
66 -ATTACCATTTTA-CCCCTAAACTCCCAAAAATCCCATTTTTGACCCCAAACCT
* *
8529 TCCAAAAATTACCATTTTACCCCCAAAC-TCCGAAAAATCCCCTTTT
1 TCCAAAAATTACCATTTTA-CCCTAAACTTCC-AAAAATCCCATTTT
8575 CGACCACGAA
Statistics
Matches: 146, Mismatches: 13, Indels: 8
0.87 0.08 0.05
Matches are distributed among these distances:
116 6 0.04
117 94 0.64
118 46 0.32
ACGTcount: A:0.34, C:0.31, G:0.03, T:0.32
Consensus pattern (117 bp):
TCCAAAAATTACCATTTTACCCTAAACTTCCAAAAATCCCATTTTTAACCCTGAACCTTTCCAAA
ATTACCATTTTACCCCTAAACTCCCAAAAATCCCATTTTTGACCCCAAACCT
Found at i:9807 original size:49 final size:49
Alignment explanation
Indices: 9743--10086 Score: 189
Period size: 49 Copynumber: 7.0 Consensus size: 49
9733 CAAGAAGCAT
* *
9743 GAAGGGAAAGATTTAAGCCGCAATGGCAAATCTAGTACCACGAAGATATG
1 GAAGGAAAAG-TTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATATG
* * ** * * * *
9793 GAAGGAAAAGTTTAAGTCGCAACAGTGAACCTTGTACCTCAGAA-ACAT-
1 GAAGGAAAAGTTTAAGCCGCAACGGCAAATCTAGTACCAC-GAAGATATG
* *
9841 GAAGGGAAATA-TTTAAGCCGCAATGACAAATCTAGTACCACGAAGATATG
1 GAA-GGAAA-AGTTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATATG
* * * * * * * *
9891 GAGGGAAAGGTTTAAGTCGTAACGGCAAATCTTGTACCTC-AAAAGCAT-
1 GAAGGAAAAGTTTAAGCCGCAACGGCAAATCTAGTACCACGAAGA-TATG
* * ** * *
9939 GAAGGGAAAGATTTAAGCCGTAACGGTTAATCCAGTACCATGAAGATATG
1 GAAGGAAAAG-TTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATATG
* * * * * * * * *
9989 GAGGGAAAGGTTTAAGTCACAACGACGAACCTTGTACCTCAGAAG--ATG
1 GAAGGAAAAGTTTAAGCCGCAACGGCAAATCTAGTACCAC-GAAGATATG
* * * * * *
10037 AGATGGGAAAGATTTAAGTCGTAACGGCGAATCTAGTACGACGAAGATAT
1 -GAAGGAAAAG-TTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATAT
10087 AAGTCGCAAC
Statistics
Matches: 213, Mismatches: 66, Indels: 29
0.69 0.21 0.09
Matches are distributed among these distances:
48 19 0.09
49 140 0.66
50 52 0.24
51 2 0.01
ACGTcount: A:0.38, C:0.16, G:0.25, T:0.21
Consensus pattern (49 bp):
GAAGGAAAAGTTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATATG
Found at i:9909 original size:98 final size:97
Alignment explanation
Indices: 9735--10086 Score: 438
Period size: 98 Copynumber: 3.6 Consensus size: 97
9725 TTCATTACCA
* * *
9735 AGAAGCATGAAGGGAAAGATTTAAGCCGCAATGGCAAATCTAGTACCACGAAGATATGGAAGGAA
1 AGAAACATGAAGGGAAAGATTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATATGGAGGGAA
* *
9800 AAGTTTAAGTCGCAACAGTGAACCTTGTACCTC
66 AGGTTTAAGTCGCAAC-GCGAACCTTGTACCTC
* * *
9833 AGAAACATGAAGGGAAATATTTAAGCCGCAATGACAAATCTAGTACCACGAAGATATGGAGGGAA
1 AGAAACATGAAGGGAAAGATTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATATGGAGGGAA
* * *
9898 AGGTTTAAGTCGTAACGGCAAATCTTGTACCTC
66 AGGTTTAAGTCGCAAC-GCGAACCTTGTACCTC
* ** * *
9931 A-AAAGCATGAAGGGAAAGATTTAAGCCGTAACGGTTAATCCAGTACCATGAAGATATGGAGGGA
1 AGAAA-CATGAAGGGAAAGATTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATATGGAGGGA
*
9995 AAGGTTTAAGTCACAACGACGAACCTTGTACCTC
65 AAGGTTTAAGTCGCAACG-CGAACCTTGTACCTC
* * * * *
10029 AG-AAGATGAGATGGGAAAGATTTAAGTCGTAACGGCGAATCTAGTACGACGAAGATAT
1 AGAAACATGA-A-GGGAAAGATTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATAT
10087 AAGTCGCAAC
Statistics
Matches: 220, Mismatches: 29, Indels: 9
0.85 0.11 0.03
Matches are distributed among these distances:
97 8 0.04
98 172 0.78
99 40 0.18
ACGTcount: A:0.39, C:0.16, G:0.25, T:0.20
Consensus pattern (97 bp):
AGAAACATGAAGGGAAAGATTTAAGCCGCAACGGCAAATCTAGTACCACGAAGATATGGAGGGAA
AGGTTTAAGTCGCAACGCGAACCTTGTACCTC
Found at i:10176 original size:49 final size:49
Alignment explanation
Indices: 10123--10238 Score: 119
Period size: 49 Copynumber: 2.4 Consensus size: 49
10113 AAAGAACATG
* *
10123 AAGGGAAAGATTGAAG-CCGCAACGGTGAGTCC-GGTACCAGAAAGATTTC
1 AAGGGAAAGATT-AAGACCGCAACGGTGA-ACCAGGTACCAGAAAGACTTC
* * * * *
10172 AAGGGAAAGGTTACGACCGTAACGGTGAACCAGGTACCATAAAGACTTG
1 AAGGGAAAGATTAAGACCGCAACGGTGAACCAGGTACCAGAAAGACTTC
* *
10221 AAGGGAAAGGTTACGACC
1 AAGGGAAAGATTAAGACC
10239 ACGACAGCGA
Statistics
Matches: 58, Mismatches: 7, Indels: 4
0.84 0.10 0.06
Matches are distributed among these distances:
48 4 0.07
49 54 0.93
ACGTcount: A:0.36, C:0.18, G:0.30, T:0.16
Consensus pattern (49 bp):
AAGGGAAAGATTAAGACCGCAACGGTGAACCAGGTACCAGAAAGACTTC
Found at i:10251 original size:49 final size:49
Alignment explanation
Indices: 10155--10251 Score: 122
Period size: 49 Copynumber: 2.0 Consensus size: 49
10145 CGGTGAGTCC
* ** * *
10155 GGTACCAGAAAGATTTCAAGGGAAAGGTTACGACCGTAACGGTGAACCA
1 GGTACCAGAAAGACTTCAAGGGAAAGGTTACGACCACAACAGCGAACCA
* * *
10204 GGTACCATAAAGACTTGAAGGGAAAGGTTACGACCACGACAGCGAACC
1 GGTACCAGAAAGACTTCAAGGGAAAGGTTACGACCACAACAGCGAACC
10252 CAATACCTTA
Statistics
Matches: 40, Mismatches: 8, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
49 40 1.00
ACGTcount: A:0.37, C:0.21, G:0.28, T:0.14
Consensus pattern (49 bp):
GGTACCAGAAAGACTTCAAGGGAAAGGTTACGACCACAACAGCGAACCA
Found at i:10497 original size:91 final size:91
Alignment explanation
Indices: 10341--10514 Score: 240
Period size: 91 Copynumber: 1.9 Consensus size: 91
10331 ATAGCAAATA
* * * *
10341 TTTATCTCTCTTAAGTTACAGTAAGAGCAAGATAAAGCTTCAACGTCAAACCCTATCCTCTTGAA
1 TTTATCTCTCTGAAGTTACAGTAAAAGCAAGATAAAGCTTCAACATCAAACCCTATCCTCCTGAA
*
10406 GTTATGGTAAAGTTGGATAACAAGTC
66 GTTATAGTAAAGTTGGATAACAAGTC
* * * * *
10432 TTTATCTCTCTGAAGTTGCAGTAAAAGCAAGGTGAAGCTTCAACATCAAATCCTATCTTCCTGAA
1 TTTATCTCTCTGAAGTTACAGTAAAAGCAAGATAAAGCTTCAACATCAAACCCTATCCTCCTGAA
* *
10497 GTTGTAGTGAAGTTGGAT
66 GTTATAGTAAAGTTGGAT
10515 TAAAAACAAA
Statistics
Matches: 71, Mismatches: 12, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
91 71 1.00
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
Consensus pattern (91 bp):
TTTATCTCTCTGAAGTTACAGTAAAAGCAAGATAAAGCTTCAACATCAAACCCTATCCTCCTGAA
GTTATAGTAAAGTTGGATAACAAGTC
Found at i:10611 original size:104 final size:104
Alignment explanation
Indices: 10429--10623 Score: 273
Period size: 104 Copynumber: 1.9 Consensus size: 104
10419 TGGATAACAA
* * * * *
10429 GTCTTTATCTCTCTGAAGTTGCAGTAAAAGCAAGGTGAAGCTTCAACATCAAATCCTATCTTCCT
1 GTCTTTATCTCTCTGAAGTTACAGTAAAAGCAAGATAAAACTTCAACATCAAATCCAATCTTCCT
* *
10494 GAAGTTGTAGTGAAGTTGGATTAAAAACAAAAATAATAG
66 GAAGTTGCAGTGAAGTTGGATCAAAAACAAAAATAATAG
* * * * *
10533 GTCTTTATTTCTCTGAAGTTACAGTAAGAGCAAGATAAAACTTTAACTTCAAATTCAATCTTCCT
1 GTCTTTATCTCTCTGAAGTTACAGTAAAAGCAAGATAAAACTTCAACATCAAATCCAATCTTCCT
*
10598 GAAGTTGCGGTGAAGTTGGATCAAAA
66 GAAGTTGCAGTGAAGTTGGATCAAAA
10624 CCACAGTAGC
Statistics
Matches: 78, Mismatches: 13, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
104 78 1.00
ACGTcount: A:0.35, C:0.15, G:0.18, T:0.31
Consensus pattern (104 bp):
GTCTTTATCTCTCTGAAGTTACAGTAAAAGCAAGATAAAACTTCAACATCAAATCCAATCTTCCT
GAAGTTGCAGTGAAGTTGGATCAAAAACAAAAATAATAG
Found at i:11836 original size:24 final size:25
Alignment explanation
Indices: 11786--11844 Score: 75
Period size: 26 Copynumber: 2.4 Consensus size: 25
11776 TTATTTATTT
**
11786 ATATATATATATATACACGAATGTAC
1 ATATATATATATATACAC-AACATAC
*
11812 ATATATATATATATGCA-AACATAC
1 ATATATATATATATACACAACATAC
11836 ATATATATA
1 ATATATATA
11845 CACGTATGTA
Statistics
Matches: 30, Mismatches: 3, Indels: 2
0.86 0.09 0.06
Matches are distributed among these distances:
24 14 0.47
26 16 0.53
ACGTcount: A:0.49, C:0.10, G:0.05, T:0.36
Consensus pattern (25 bp):
ATATATATATATATACACAACATAC
Done.