Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013922.1 Kokia drynarioides strain JFW-HI SEQ_128952, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  251996

Tables:   1   

This is table  1  of  1  ( 62 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10422--10452
2
16.0
2
93
6
55
48
0
0
51
1.00
13708--13741
17
1.9
18
88
5
52
38
26
5
29
1.80
18818--19004
51
3.6
51
83
2
223
29
24
14
31
1.95
20699--20803
36
2.9
36
84
1
129
21
25
14
38
1.92
21291--21342
27
1.9
27
96
0
95
19
15
44
21
1.87
21490--21526
14
2.8
14
88
8
51
64
0
35
0
0.94
24486--24552
35
1.9
35
90
0
107
49
17
0
32
1.48
24481--24559
35
2.4
31
78
15
95
48
18
0
32
1.49
27622--27646
4
6.2
4
100
0
50
24
28
48
0
1.52
34955--35031
38
2.0
38
100
0
154
50
12
20
15
1.77
42721--42770
24
2.0
25
85
11
68
34
4
18
44
1.68
45069--45094
13
2.0
13
100
0
52
46
0
7
46
1.31
46382--46454
28
2.4
30
82
8
87
39
1
4
54
1.28
52043--52124
34
2.4
34
75
13
80
28
14
14
42
1.85
54520--54580
30
2.0
30
100
0
122
22
29
13
34
1.92
66889--66923
17
2.0
18
88
5
54
42
2
5
48
1.41
68742--68784
20
2.2
20
83
8
52
32
2
2
62
1.20
79644--79686
18
2.4
17
77
11
50
11
6
6
74
1.21
79768--79792
4
6.2
4
100
0
50
52
24
0
24
1.48
90641--90683
13
3.4
13
75
18
54
44
6
11
37
1.68
90634--90682
25
2.0
25
95
0
89
40
6
10
42
1.63
90757--90787
14
2.1
15
94
5
55
38
12
6
41
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93308--93335
2
14.0
2
100
0
56
50
0
0
50
1.00
94414--94452
21
1.9
20
84
5
51
25
20
2
51
1.60
110908--111089
43
4.2
43
80
6
190
28
24
20
26
1.99
112204--112290
42
2.1
41
95
2
156
16
26
19
37
1.92
112652--112684
12
2.6
13
85
9
50
57
12
0
30
1.35
115046--115077
16
2.0
16
100
0
64
37
0
18
43
1.51
115593--115628
14
2.6
14
95
4
65
30
11
13
44
1.79
120050--120074
12
2.1
12
100
0
50
24
60
16
0
1.36
120604--120649
24
1.9
24
82
8
58
32
4
2
60
1.28
121403--121466
31
2.1
30
82
5
76
45
10
6
37
1.65
124242--124305
30
2.0
33
82
17
82
45
3
0
51
1.17
125935--125987
21
2.5
20
81
9
61
67
1
24
5
1.22
130288--130316
2
14.5
2
100
0
58
51
0
0
48
1.00
133002--133042
6
7.0
6
97
2
75
0
31
34
34
1.58
150188--150224
14
2.5
15
91
4
58
56
0
0
43
0.99
152235--152278
20
2.2
20
88
4
63
22
0
2
75
0.92
159341--159465
48
2.6
49
81
6
130
28
20
24
28
1.99
165035--165112
40
2.0
40
100
0
156
35
16
15
32
1.90
165725--165764
21
1.9
21
85
10
55
37
10
15
37
1.80
177018--177049
4
8.2
4
93
6
57
0
25
0
75
0.81
183578--183617
14
2.9
15
82
14
50
72
0
0
27
0.85
195997--196027
6
5.2
6
100
0
62
16
51
0
32
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196025--196052
6
4.7
6
100
0
56
35
50
14
0
1.43
196404--196450
21
2.2
21
84
3
58
65
0
12
21
1.25
196419--196458
20
2.0
21
90
5
64
62
2
17
17
1.44
202439--202466
14
2.0
14
100
0
56
92
0
7
0
0.37
207851--208028
95
1.9
94
86
1
257
40
12
12
34
1.81
220053--220082
12
2.5
12
94
0
51
46
33
0
20
1.51
221008--221034
3
9.0
3
100
0
54
33
0
0
66
0.92
224573--224607
16
2.2
16
89
0
52
28
2
11
57
1.48
225375--225431
22
2.6
22
97
0
105
49
17
5
28
1.68
230004--230046
20
2.2
20
91
0
68
30
13
13
41
1.84
231283--231395
57
2.0
56
89
1
165
23
8
11
56
1.62
232780--232836
29
2.0
29
86
6
80
40
8
1
49
1.44
233342--233389
24
2.0
23
84
15
62
58
4
0
37
1.18
235731--236040
30
10.4
29
73
15
226
29
3
31
35
1.75
235717--236040
59
5.4
59
85
3
427
29
3
30
35
1.75
237757--237806
6
8.8
6
82
12
70
50
0
2
48
1.12
237754--237813
17
3.6
17
88
4
95
53
0
1
45
1.10
237757--237813
11
5.1
11
79
10
62
50
0
1
47
1.11

Tables:   1

The End!