Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013923.1 Kokia drynarioides strain JFW-HI SEQ_128953, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73429

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
728--766
6
6.5
6
82
11
53
28
0
2
69
1.02
728--766
13
3.2
12
82
10
53
28
0
2
69
1.02
729--766
18
2.1
19
90
5
60
26
0
2
71
1.00
1559--1616
10
5.8
10
75
16
50
77
1
12
8
1.06
1594--1626
16
2.0
17
88
5
50
81
3
15
0
0.80
1952--1987
9
4.0
9
92
0
63
11
11
30
47
1.74
2669--2714
25
1.9
25
86
8
69
34
4
6
54
1.46
5271--5327
30
1.9
30
88
0
87
26
21
14
38
1.91
8708--8751
23
1.9
23
85
0
61
34
4
11
50
1.59
8735--8764
14
2.1
14
93
0
51
30
10
13
46
1.75
9672--9931
30
8.7
29
80
8
256
41
4
20
33
1.72
9680--9931
29
8.4
29
79
10
194
42
4
19
32
1.71
12820--12897
37
2.1
37
85
2
102
21
15
19
43
1.87
16523--16736
63
3.4
63
76
6
177
32
31
7
28
1.85
21545--21666
39
3.1
39
89
8
185
40
5
21
32
1.77
24930--25336
51
8.0
51
66
13
128
46
9
2
41
1.51
24767--25400
149
4.3
148
87
6
822
44
9
2
42
1.53
25330--25377
23
2.2
22
85
7
62
43
4
2
50
1.33
25824--25849
3
8.7
3
100
0
52
69
0
0
30
0.89
25848--25894
3
15.7
3
100
0
94
68
0
31
0
0.90
25939--25963
11
2.3
11
100
0
50
84
0
8
8
0.79
27611--27639
15
1.9
15
100
0
58
27
27
13
31
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29441--29550
30
3.7
29
73
14
82
35
2
23
38
1.69
29456--29549
29
3.2
28
77
8
89
36
1
22
40
1.61
29453--29554
30
3.4
29
80
2
96
36
0
23
39
1.62
31252--31568
46
6.9
46
80
8
344
25
16
26
31
1.96
31252--31568
138
2.3
135
84
7
399
25
16
26
31
1.96
31632--32147
96
5.4
95
87
1
708
21
21
18
37
1.94
33144--33189
6
7.8
6
76
13
51
0
21
0
78
0.76
33142--33190
12
4.2
12
77
15
57
0
24
0
75
0.80
33139--33206
18
3.5
20
73
22
65
0
29
0
70
0.87
34027--34073
24
2.0
23
83
4
58
0
14
8
76
1.01
34129--34168
15
2.5
16
88
8
55
2
22
0
75
0.93
40049--40158
30
3.7
30
90
3
168
36
6
22
34
1.80
40048--40174
60
2.1
60
85
2
175
37
6
21
34
1.79
40052--40175
59
2.1
60
85
7
164
37
6
21
34
1.79
44562--44602
21
1.9
22
85
14
59
24
4
4
65
1.32
48162--48710
52
10.6
51
88
2
767
26
16
24
33
1.96
48162--48710
155
3.5
156
90
1
827
26
16
24
33
1.96
48162--48710
207
2.6
207
90
1
850
26
16
24
33
1.96
49630--49668
14
2.9
14
88
3
53
56
0
20
23
1.42
55853--55883
16
1.9
16
93
0
53
3
16
0
80
0.83
56549--56579
14
2.3
13
94
5
53
83
0
0
16
0.64
56718--56757
22
1.9
21
90
10
64
42
0
7
50
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59588--59639
21
2.5
21
100
0
104
28
13
30
26
1.94
59585--59657
21
3.5
21
88
3
94
28
13
27
30
1.94
60622--60651
12
2.5
12
100
0
60
0
30
10
60
1.30
67397--67431
18
1.9
18
88
0
52
45
8
8
37
1.65
68242--68302
19
3.0
21
75
20
67
40
0
3
55
1.16
69619--69665
22
2.1
22
100
0
94
63
8
14
12
1.50
71332--71376
24
2.0
22
91
8
72
57
0
2
40
1.11
72776--72818
22
2.0
22
86
4
61
55
16
0
27
1.41
73257--73282
11
2.4
11
100
0
52
38
0
7
53
1.30

Tables:   1

The End!