Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013926.1 Kokia drynarioides strain JFW-HI SEQ_128956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54242

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8580--8656
35
2.2
35
88
4
111
19
22
16
41
1.90
22448--22490
19
2.4
18
88
11
63
67
2
30
0
1.03
22487--22521
12
2.9
12
91
0
61
48
2
42
5
1.41
25990--26039
3
16.7
3
100
0
100
68
0
0
32
0.90
26043--26077
3
12.0
3
87
6
54
65
0
31
2
1.07
26478--26556
8
9.6
8
72
10
61
65
2
1
30
1.13
26478--26531
23
2.3
23
90
3
81
66
3
0
29
1.09
26891--26923
17
1.9
17
88
11
50
42
6
3
48
1.43
28958--29009
21
2.5
20
75
9
59
32
0
5
61
1.20
31899--32123
28
8.0
28
77
7
197
21
14
11
52
1.73
31899--32123
57
4.0
57
79
8
244
21
14
11
52
1.73
31899--32120
56
3.9
55
80
8
225
21
13
11
52
1.72
31918--32123
84
2.4
85
78
5
236
21
14
11
51
1.74
32622--33163
45
12.0
45
86
0
634
35
7
16
40
1.77
35691--35734
2
22.0
2
85
0
61
45
2
4
47
1.35
35691--35734
16
2.8
16
96
0
79
45
2
4
47
1.35
35826--35923
24
4.1
24
83
0
115
38
16
22
22
1.92
41508--41570
31
2.0
31
100
0
126
41
12
3
42
1.59
50579--50632
23
2.4
23
81
3
65
22
20
9
48
1.78
53936--53971
18
2.1
18
89
5
56
41
0
25
33
1.55

Tables:   1

The End!