Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001394.1 Kokia drynarioides strain JFW-HI SEQ_112879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40499

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--172
28
2.2
29
82
2
74
33
26
11
28
1.91
5067--5138
20
3.7
19
77
7
74
52
6
2
37
1.43
5104--5166
27
2.3
27
81
7
74
52
3
0
44
1.17
5067--5143
19
4.1
19
78
6
61
51
6
2
38
1.41
5134--5184
19
2.6
19
84
9
59
54
3
0
41
1.19
5134--5204
18
3.6
19
77
12
63
57
2
1
38
1.22
5150--5225
40
1.9
40
86
5
109
61
3
1
32
1.22
6507--6565
30
2.0
30
93
0
100
64
1
3
30
1.20
15262--15304
23
2.0
22
86
9
61
62
13
11
11
1.54
19135--19164
15
1.9
16
93
6
53
3
33
0
63
1.11
19157--19187
10
3.1
10
100
0
62
19
9
0
70
1.14
23489--23514
4
6.5
4
100
0
52
50
23
0
26
1.50
23557--23676
48
2.5
47
77
10
129
35
5
5
53
1.49
24398--24688
30
9.7
30
80
3
262
36
25
2
36
1.68
24398--24694
91
3.3
91
84
2
321
36
25
2
36
1.69
24811--24852
14
2.9
15
82
10
61
19
7
4
69
1.31
29268--29325
11
5.5
11
80
17
70
82
0
17
0
0.66
29271--29354
9
8.9
9
76
14
80
79
0
19
1
0.79
29271--29328
21
2.9
19
83
14
73
84
0
15
0
0.62
29268--29353
30
2.8
31
67
20
56
79
0
19
1
0.80
29286--29359
19
4.1
18
79
8
78
75
0
22
1
0.88
30308--31074
50
15.5
50
71
11
326
34
14
32
18
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30285--31086
99
8.1
99
76
7
630
34
14
32
18
1.91
30285--31073
198
4.0
198
85
2
949
34
14
32
19
1.91
30389--31086
297
2.4
296
80
7
795
34
14
32
18
1.91
31413--31960
39
14.1
39
67
15
201
24
30
19
26
1.98
31452--32006
78
7.1
75
82
6
554
23
30
19
26
1.98
31452--31966
156
3.3
156
83
2
624
24
30
19
26
1.98
31452--32103
156
4.2
155
80
4
463
24
29
19
26
1.98
32711--32755
16
2.7
16
79
6
54
22
57
6
13
1.59
33776--34093
30
10.7
31
82
8
331
37
26
1
34
1.66
33779--34094
59
5.3
59
83
5
336
37
25
1
34
1.66
34216--34265
16
3.2
16
77
5
50
22
12
6
60
1.53
39317--39342
2
13.0
2
100
0
52
0
0
50
50
1.00
39911--39935
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!