Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013943.1 Kokia drynarioides strain JFW-HI SEQ_128973, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  154038

Tables:   1   

This is table  1  of  1  ( 55 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7899--7939
16
2.5
17
88
7
59
31
4
2
60
1.30
7914--7952
18
2.3
16
86
8
51
33
2
5
58
1.33
13395--13824
207
2.1
209
91
1
693
21
22
20
36
1.95
14866--14939
35
2.1
35
94
0
130
12
21
14
51
1.75
27009--27077
22
3.1
22
95
0
129
23
47
11
17
1.80
28002--28203
80
2.5
80
80
4
237
33
25
16
24
1.96
29630--29699
24
2.7
26
83
12
83
15
17
15
51
1.77
38506--38568
31
2.0
31
100
0
126
39
0
25
34
1.56
46412--46624
61
3.5
61
92
0
338
30
12
22
34
1.91
47336--47375
21
1.9
21
89
0
62
27
20
20
32
1.97
55351--55386
2
18.0
2
94
0
63
50
2
0
47
1.15
57101--57135
10
3.4
10
84
7
52
54
0
0
45
0.99
59526--59592
27
2.4
28
85
7
82
16
13
4
65
1.42
64753--64788
7
5.3
7
90
6
56
77
0
22
0
0.76
64759--64805
22
2.1
22
84
11
60
78
0
21
0
0.75
64743--64803
30
2.1
28
82
11
70
75
0
24
0
0.80
64728--64805
16
4.9
15
77
11
59
78
0
19
2
0.87
65666--66193
49
10.7
50
71
8
305
36
16
28
17
1.92
65666--66195
99
5.4
100
81
4
549
36
16
28
17
1.92
65666--66236
197
2.9
196
81
2
635
36
16
28
17
1.92
66468--66799
122
2.7
122
82
3
407
36
17
23
22
1.95
69239--69272
2
18.0
2
88
11
54
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70764--70820
4
14.2
4
92
0
87
52
21
0
26
1.47
86132--86221
37
2.4
37
90
0
144
36
18
18
25
1.94
90663--90720
20
2.8
21
82
15
59
53
1
0
44
1.10
90758--90807
16
3.2
16
75
18
61
50
0
0
50
1.00
91434--91481
23
2.0
24
88
4
71
64
12
10
12
1.50
94057--94109
21
2.5
21
96
0
97
47
35
7
9
1.64
94044--94076
15
2.2
15
94
0
57
45
33
6
15
1.70
94129--94258
65
2.0
64
96
1
242
21
26
16
34
1.95
95292--95330
3
13.3
3
86
5
53
28
0
5
66
1.12
95292--95333
14
2.9
14
89
3
57
26
0
7
66
1.17
97220--97250
3
10.3
3
100
0
62
32
0
0
67
0.91
98214--98259
22
2.1
23
84
8
60
39
8
2
50
1.46
100430--100465
7
4.9
7
87
12
54
41
25
0
33
1.55
103744--103777
9
3.7
9
88
4
50
23
2
0
73
0.97
103822--103872
16
3.3
15
76
10
50
21
0
9
68
1.18
104888--105188
114
2.7
114
80
3
315
38
10
30
20
1.86
107353--107382
12
2.5
12
100
0
60
33
0
40
26
1.57
109627--110227
62
10.1
59
75
13
429
27
18
17
36
1.93
109627--110197
60
9.6
60
77
13
515
27
19
17
35
1.95
109841--110175
110
2.9
109
85
9
422
27
17
17
37
1.93
113976--114024
12
3.8
12
75
19
53
48
0
8
42
1.32
114125--114773
86
7.6
86
89
4
858
42
5
4
47
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114125--114773
169
3.8
170
87
5
895
42
5
4
47
1.46
114945--114973
10
2.9
10
100
0
58
20
31
20
27
1.98
117214--117274
30
2.0
30
87
6
88
26
8
4
60
1.45
117222--117312
30
3.1
30
87
1
112
24
7
4
63
1.39
118185--118381
62
3.2
62
88
2
292
34
17
20
27
1.95
119371--119691
165
1.9
166
98
0
626
43
19
20
16
1.88
120681--120712
16
2.0
16
100
0
64
6
25
12
56
1.59
121765--121815
20
2.5
20
83
3
66
50
7
7
33
1.60
133713--133742
2
15.0
2
100
0
60
50
0
0
50
1.00
147563--147633
34
2.1
34
100
0
142
42
35
14
8
1.75
152191--152242
21
2.5
22
84
6
72
48
40
1
9
1.47

Tables:   1

The End!