Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013947.1 Kokia drynarioides strain JFW-HI SEQ_128977, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  265696

Tables:   1   

This is table  1  of  1  ( 64 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
218--302
43
2.0
43
86
4
118
30
11
10
47
1.74
871--1006
44
3.0
45
86
2
184
30
26
22
20
1.98
4299--4384
4
21.2
4
73
15
52
1
33
0
65
1.01
4299--4382
20
4.3
20
80
5
102
1
33
0
65
1.00
4331--4379
9
5.8
9
76
11
50
0
32
0
67
0.91
5626--5672
24
2.0
24
91
0
76
59
2
0
38
1.09
5637--5686
23
2.1
24
81
3
57
58
6
0
36
1.23
7039--7087
23
2.1
24
84
3
64
30
4
2
63
1.24
7039--7111
28
2.9
23
77
16
65
32
2
1
63
1.17
7055--7107
28
1.9
27
92
3
88
33
1
0
64
1.05
7351--7408
25
2.3
25
79
5
64
36
1
0
62
1.06
7733--7757
13
1.9
13
100
0
50
76
0
0
24
0.80
12388--12460
3
25.0
3
84
5
96
67
0
32
0
0.91
14171--14223
20
2.7
20
88
2
81
5
5
15
73
1.21
14218--14285
12
6.1
12
77
14
56
4
2
22
70
1.18
14200--14267
32
2.1
32
83
5
84
4
4
20
70
1.22
14199--14322
44
2.8
43
80
7
124
7
4
20
68
1.30
14220--14292
32
2.2
35
82
7
89
6
2
20
69
1.24
14227--14335
44
2.5
44
82
8
116
8
3
20
67
1.32
14447--14496
25
2.0
26
88
4
75
30
0
4
66
1.10
16326--16410
38
2.3
37
82
6
93
60
1
5
32
1.29
18258--18285
2
14.0
2
100
0
56
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23727--24008
59
4.6
59
73
14
196
51
6
17
25
1.69
23697--24008
125
2.5
125
84
6
418
49
7
17
25
1.72
26217--26242
11
2.4
11
100
0
52
23
7
0
69
1.14
32728--32854
61
2.1
60
87
8
179
41
3
15
39
1.63
36567--36591
4
6.2
4
100
0
50
28
0
24
48
1.52
40421--40473
22
2.5
22
84
3
72
47
0
1
50
1.12
42394--42428
18
1.9
17
88
11
52
77
0
14
8
0.99
43978--44044
3
22.3
3
100
0
134
0
32
0
67
0.91
47705--47738
3
11.3
3
93
0
59
64
0
2
32
1.08
50987--51026
20
2.0
21
90
5
64
25
12
7
55
1.63
52692--52724
16
2.1
16
88
11
50
57
21
0
21
1.41
53869--53895
4
6.8
4
100
0
54
25
0
22
51
1.48
53865--53909
12
3.6
12
80
11
54
31
2
17
48
1.59
62707--62755
24
2.0
24
84
7
64
26
0
6
67
1.14
65097--65646
155
3.6
154
89
3
779
19
8
20
51
1.73
75704--75730
14
1.9
14
100
0
54
7
0
0
92
0.38
75704--75738
17
1.9
18
88
11
54
8
2
0
88
0.61
86527--86575
25
2.0
25
84
8
64
42
4
4
48
1.40
86689--86738
26
1.9
26
95
0
91
62
2
0
36
1.07
86707--86755
21
2.3
22
86
6
75
57
4
0
38
1.18
107249--107397
75
2.0
75
95
0
271
16
21
18
43
1.88
113259--113314
16
3.4
16
80
2
58
41
3
0
55
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130793--130821
12
2.3
13
94
5
51
10
0
0
89
0.48
131886--131917
11
3.1
11
91
8
50
0
12
0
87
0.54
132839--132889
23
2.2
23
96
0
93
35
25
3
35
1.75
137910--137946
7
5.3
7
96
0
65
13
16
54
16
1.72
140095--140159
30
2.1
31
83
11
80
58
9
1
30
1.39
143358--143401
18
2.5
18
88
3
63
13
6
22
56
1.61
149274--149306
3
11.3
3
87
6
50
36
0
0
63
0.95
165575--165721
73
2.0
73
91
0
240
34
5
17
42
1.73
183834--183865
16
2.0
16
100
0
64
43
0
0
56
0.99
197193--197251
29
2.0
29
86
3
82
28
8
13
49
1.71
199846--199919
38
2.0
37
89
5
114
64
4
4
27
1.29
200100--200139
3
13.3
3
89
0
62
0
27
32
40
1.57
216696--216740
20
2.3
19
84
7
54
31
2
6
60
1.35
240329--240466
69
2.0
69
84
5
181
31
15
14
38
1.87
250973--251012
20
2.0
20
100
0
80
25
10
30
35
1.88
259779--259820
8
5.2
8
80
11
50
69
0
0
30
0.89
260745--260807
24
2.6
24
82
0
81
25
12
9
52
1.69
262737--262799
24
2.6
24
79
0
72
25
14
11
49
1.76
264422--264449
13
2.2
13
100
0
56
35
0
14
50
1.43
264515--264560
25
1.9
23
86
8
65
34
4
6
54
1.46

Tables:   1

The End!