Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013948.1 Kokia drynarioides strain JFW-HI SEQ_128978, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48342

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
886--1231
59
5.9
59
81
9
227
33
24
5
36
1.79
886--1222
118
2.9
118
79
10
300
33
24
5
36
1.78
897--1211
30
10.7
29
68
21
144
32
25
5
36
1.78
5586--5634
4
12.5
4
89
4
73
24
0
0
75
0.80
6369--6435
20
3.3
20
69
24
52
52
0
1
46
1.09
6473--6498
6
4.3
6
100
0
52
0
61
0
38
0.96
7333--7396
9
7.7
9
72
24
52
50
0
0
50
1.00
7331--7396
30
2.3
29
84
12
91
48
0
0
51
1.00
7352--7394
21
2.0
23
90
9
72
53
0
0
46
1.00
12241--12277
12
3.0
13
80
11
51
56
13
24
5
1.58
13556--13827
30
9.1
30
80
7
259
34
25
2
37
1.68
13894--13950
28
2.0
28
96
0
105
14
21
7
57
1.60
15252--15315
32
2.0
32
81
6
76
15
12
6
65
1.44
15921--15966
23
2.0
23
83
8
58
34
6
2
56
1.37
26025--26074
6
8.3
6
100
0
100
32
34
18
16
1.92
29725--29780
8
6.6
8
80
15
60
26
1
3
67
1.16
29747--29780
10
3.8
9
88
11
52
29
0
2
67
1.05
30947--31033
30
3.0
28
75
9
93
44
0
1
54
1.07
31146--31184
16
2.4
17
86
8
62
71
0
0
28
0.86
32153--32211
29
2.0
29
83
6
75
61
0
1
37
1.07
32163--32214
22
2.4
22
76
0
59
61
0
0
38
0.96
33765--33808
2
22.5
2
95
4
81
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34584--34637
28
1.9
28
84
0
72
70
7
5
16
1.30
35563--35603
11
3.4
13
77
19
52
68
0
0
31
0.90
47200--47274
32
2.4
32
82
6
100
66
0
33
0
0.92
47199--47267
17
4.2
16
80
16
70
65
0
34
0
0.93
47919--48017
29
3.4
30
71
13
98
53
8
1
37
1.37
47919--47967
16
3.2
16
77
16
68
59
4
0
36
1.17

Tables:   1

The End!