Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013949.1 Kokia drynarioides strain JFW-HI SEQ_128979, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  179745

Tables:   1   

This is table  1  of  1  ( 64 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3450--4417
204
4.8
204
92
1
1504
35
19
24
20
1.96
4259--4553
136
2.2
136
91
0
482
35
17
24
22
1.95
4055--4705
340
1.9
334
87
3
946
36
18
23
21
1.95
5112--5191
6
14.0
6
74
19
64
42
2
2
52
1.28
5107--5191
17
5.0
17
82
4
100
41
2
2
54
1.26
5108--5175
33
2.1
33
88
0
100
39
1
1
57
1.17
5107--5181
11
6.7
11
73
22
59
38
1
1
58
1.15
5866--5904
13
3.0
13
80
0
51
43
2
5
48
1.38
6868--7186
30
10.8
30
74
11
248
35
29
2
32
1.72
6868--7188
59
5.4
59
84
1
428
35
29
2
32
1.72
18381--18406
9
2.9
9
100
0
52
46
0
30
23
1.53
20393--20442
18
2.7
19
81
12
59
10
0
44
46
1.37
28045--28187
43
3.3
43
83
4
191
37
10
25
27
1.88
32284--32372
44
2.0
44
100
0
178
14
22
22
40
1.90
37102--37136
18
1.9
18
88
0
52
77
8
8
5
1.13
38038--38088
25
2.0
25
92
7
86
33
7
19
39
1.81
46790--46827
14
2.6
15
83
8
51
47
7
23
21
1.77
51074--51110
19
2.1
19
85
10
51
37
16
13
32
1.87
54535--54567
16
2.1
16
94
0
57
36
36
6
21
1.78
59006--59080
33
2.3
33
88
0
105
46
13
21
18
1.83
61805--61847
10
4.1
10
80
11
50
48
0
0
51
1.00
61899--61942
7
6.8
6
92
5
52
0
65
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61905--61939
7
5.1
7
96
3
63
0
71
0
28
0.86
62626--62687
6
9.8
6
92
3
52
38
0
61
0
0.96
62644--62678
7
5.1
7
93
6
63
28
0
71
0
0.86
62738--62778
11
3.8
11
87
3
57
53
0
0
46
1.00
64364--64455
48
1.9
48
86
2
132
19
13
26
41
1.88
65569--65606
16
2.4
16
90
0
58
23
0
10
65
1.23
65581--65657
38
2.0
38
97
0
145
29
6
12
50
1.66
66069--66094
6
4.3
6
100
0
52
38
15
0
46
1.46
66091--66117
14
1.9
14
100
0
54
59
14
3
22
1.51
66467--66525
26
2.4
24
76
18
59
44
0
0
55
0.99
66501--66560
31
1.9
31
82
0
75
50
3
0
46
1.18
68414--68466
18
2.9
18
75
10
63
28
33
9
28
1.88
85387--85420
11
3.2
11
87
4
52
35
0
0
64
0.94
84221--86261
697
3.0
650
79
10
1766
33
9
12
44
1.75
87383--87432
27
1.9
25
88
8
73
32
4
0
64
1.12
87387--87447
27
2.2
26
80
11
68
32
4
1
60
1.28
88637--88930
147
2.0
147
99
0
579
46
11
8
32
1.72
91233--91410
51
3.5
51
84
2
225
29
21
14
33
1.93
98452--98691
51
4.6
51
85
3
302
28
22
14
34
1.94
101043--101073
14
2.3
14
94
5
55
0
12
0
87
0.55
102363--102427
30
2.2
30
85
0
85
12
30
7
49
1.68
103324--103374
7
6.7
7
79
20
50
66
0
3
29
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103309--103358
25
2.0
25
88
4
73
64
2
2
32
1.16
103321--103367
16
2.9
16
84
9
60
65
0
4
29
1.11
103320--103356
9
4.3
9
80
13
51
67
0
2
29
1.04
103318--103371
25
2.2
25
83
9
76
68
0
3
27
1.06
110263--110352
5
18.4
5
86
8
123
78
3
16
1
0.94
123610--123815
108
1.9
111
90
3
337
39
18
12
29
1.87
124060--124089
3
10.0
3
92
0
51
63
0
3
33
1.11
126090--126536
45
9.9
45
84
1
520
24
17
25
31
1.97
127615--127668
7
7.4
7
79
4
54
5
12
0
81
0.85
133240--133289
18
2.7
19
78
9
59
66
6
12
16
1.43
138757--138804
23
2.1
22
82
17
55
14
12
4
68
1.34
139685--139723
16
2.3
16
86
8
51
53
10
7
28
1.62
150085--150153
29
2.3
30
78
16
72
47
14
13
24
1.79
150392--150434
12
3.3
13
77
9
52
23
9
0
67
1.19
152392--152652
39
6.7
39
85
1
290
37
17
18
26
1.93
152401--152652
117
2.2
117
85
1
326
37
17
18
26
1.93
155472--155568
47
2.1
47
86
3
133
12
8
32
46
1.71
168847--168941
46
2.1
46
97
0
181
33
2
42
22
1.65
175366--175409
3
14.3
3
95
4
79
34
0
0
65
0.93
175973--176017
22
2.0
22
91
0
72
26
4
13
55
1.57

Tables:   1

The End!