Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013950.1 Kokia drynarioides strain JFW-HI SEQ_128980, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41090

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
965--1011
21
2.2
21
100
0
94
38
4
19
38
1.71
957--1011
21
2.3
25
70
29
64
40
3
18
38
1.68
1008--1036
6
4.8
6
100
0
58
51
0
31
17
1.45
1007--1052
18
2.5
19
82
10
60
43
0
32
23
1.54
2977--3014
18
2.0
20
90
10
62
68
2
0
28
1.03
3725--3751
3
9.0
3
100
0
54
33
33
0
33
1.58
5344--5368
3
8.3
3
100
0
50
32
0
32
36
1.58
23912--23959
22
2.2
23
89
10
75
43
4
4
47
1.41
23912--23965
22
2.5
22
85
11
69
40
7
3
48
1.49
25237--25307
31
2.3
31
79
13
83
42
7
8
42
1.62
30600--30635
2
17.5
2
94
5
63
50
0
2
47
1.15
33119--33175
29
2.0
29
100
0
114
42
0
17
40
1.49
37034--37073
21
2.0
20
85
14
55
57
0
42
0
0.98
37414--37456
21
2.1
21
86
4
61
25
0
11
62
1.29
37933--37982
16
3.2
16
70
30
54
60
6
0
34
1.21
39279--39363
43
2.0
43
86
4
118
30
11
10
47
1.74
39917--40053
45
3.0
44
84
2
166
31
27
20
21
1.98
40046--40086
21
2.0
21
90
4
66
19
36
14
29
1.92
40310--40389
28
2.8
29
87
7
103
43
23
10
22
1.83
40320--40389
29
2.5
28
88
6
99
44
24
11
20
1.84

Tables:   1

The End!