Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013969.1 Kokia drynarioides strain JFW-HI SEQ_129000, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35729

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
755--852
31
3.2
30
89
5
151
45
11
23
19
1.82
2270--2531
30
8.7
30
82
9
266
41
3
20
34
1.69
2270--2535
59
4.4
59
78
9
254
40
3
20
35
1.69
4712--5112
209
1.9
210
89
0
615
22
21
17
38
1.93
11723--11779
23
2.5
23
88
0
87
22
21
26
29
1.99
16900--16987
43
2.0
43
95
0
158
11
26
13
48
1.76
19404--19441
17
2.2
18
90
4
60
44
0
0
55
0.99
19914--19985
34
2.1
34
100
0
144
26
29
11
33
1.91
20137--20179
22
2.0
20
91
8
68
55
0
11
32
1.36
20146--20181
19
1.9
18
94
5
63
55
0
13
30
1.39
21358--21821
59
7.9
57
77
11
338
31
24
4
39
1.76
21418--21874
29
15.5
29
65
19
146
31
24
5
38
1.78
21391--21874
59
8.2
58
77
9
337
31
24
5
38
1.77
22112--22297
97
1.9
97
80
8
218
30
19
14
36
1.91
26963--27095
67
2.0
65
97
2
248
31
30
16
21
1.95
28962--29025
31
2.0
32
96
3
121
45
6
31
17
1.73
29357--29395
19
2.1
18
85
4
51
38
25
0
35
1.56
33319--33696
49
7.7
49
72
10
213
41
21
23
14
1.89
33332--33895
99
5.8
97
77
11
487
39
20
24
14
1.90
33331--33872
197
2.8
189
82
6
601
40
21
24
14
1.90
33710--33862
49
3.1
49
73
9
155
37
20
26
15
1.93
33724--33901
49
3.6
49
75
6
153
37
20
27
14
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33332--33946
291
2.1
291
82
7
730
39
20
24
15
1.91
34940--34982
22
2.0
20
91
8
68
55
0
11
32
1.36
34949--34984
19
1.9
18
94
5
63
55
0
13
30
1.39

Tables:   1

The End!