Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013972.1 Kokia drynarioides strain JFW-HI SEQ_129003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  113305

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60--106
11
4.2
11
86
5
67
53
2
0
44
1.12
34--107
6
12.5
6
77
12
73
50
2
1
45
1.24
35--106
17
4.1
17
78
8
74
51
2
1
44
1.24
59--107
23
2.1
23
92
0
80
51
2
0
46
1.12
78--139
18
3.5
18
78
10
74
51
1
1
45
1.20
4187--4219
17
2.0
17
88
5
50
54
0
3
42
1.15
13297--13337
13
3.2
13
96
0
73
41
7
17
34
1.77
18701--18777
23
3.4
22
83
7
75
11
25
20
41
1.86
18766--18833
23
3.0
22
82
4
82
13
22
27
36
1.91
21117--21157
13
3.2
13
96
0
73
41
7
17
34
1.77
26521--26597
23
3.4
22
83
7
75
11
25
20
41
1.86
26586--26653
23
3.0
22
82
4
82
13
22
27
36
1.91
27017--27186
84
2.0
84
100
0
340
41
4
9
44
1.58
31336--31388
22
2.4
22
90
0
79
50
0
9
39
1.35
32294--32326
11
2.8
12
86
4
50
60
0
6
33
1.21
36838--36895
24
2.4
23
86
8
89
37
0
0
62
0.96
36838--36891
16
3.5
16
92
5
85
37
0
0
62
0.95
36832--36897
8
8.0
8
86
6
51
37
0
0
62
0.96
37955--38080
30
4.3
30
83
3
130
33
6
23
36
1.80
37955--38080
59
2.1
59
82
5
148
33
6
23
36
1.80
39804--39927
24
5.2
24
89
0
185
29
25
20
24
1.99
42002--42050
4
12.8
4
75
16
50
75
0
4
20
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42747--42875
39
3.3
39
72
14
120
30
18
20
31
1.96
53157--53197
4
10.5
4
80
15
50
78
0
2
19
0.87
68642--68675
14
2.4
14
100
0
68
47
5
29
17
1.71
73876--73913
18
2.2
18
85
4
51
47
2
13
36
1.56
75424--75449
7
3.7
7
100
0
52
26
0
30
42
1.56
88117--88302
92
2.0
92
96
0
345
31
22
18
28
1.97
96558--96593
16
2.1
18
90
10
58
47
5
2
44
1.41
98516--98551
19
1.9
18
88
5
54
41
2
5
50
1.40
98520--98591
20
3.7
19
78
9
65
38
1
8
51
1.41
98542--98591
20
2.6
19
84
6
73
36
0
10
54
1.34
107769--107795
2
13.5
2
100
0
54
0
48
0
51
1.00
109853--109916
22
2.8
23
78
4
67
60
3
0
35
1.12
112828--112873
23
2.0
23
100
0
92
47
13
17
21
1.81

Tables:   1

The End!