Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013976.1 Kokia drynarioides strain JFW-HI SEQ_129007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  219783

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2574--2721
68
2.2
68
90
4
228
33
31
17
17
1.93
5064--5111
19
2.5
20
76
6
55
16
12
10
60
1.58
5217--5241
10
2.5
10
100
0
50
16
0
0
84
0.63
7042--7139
49
2.0
49
93
0
169
30
13
20
35
1.91
14868--14897
15
2.1
15
93
6
53
13
0
33
53
1.40
20681--20853
87
2.0
87
96
0
319
30
16
21
31
1.95
27979--28036
29
2.0
29
83
6
73
41
8
0
50
1.33
39958--40006
4
12.2
4
100
0
98
24
0
26
48
1.51
40903--40927
2
12.5
2
100
0
50
52
0
0
48
1.00
45010--45044
18
1.9
18
88
0
52
42
14
2
40
1.60
48388--48433
21
2.2
21
84
3
58
60
0
0
39
0.97
54998--55041
21
2.1
21
82
0
52
43
6
2
47
1.42
55855--55892
19
2.0
19
89
0
58
42
0
0
57
0.98
57089--57128
21
2.0
21
85
5
55
10
10
22
57
1.61
64129--64203
24
3.1
25
88
3
102
25
10
6
57
1.57
64137--64215
24
3.3
24
83
3
70
26
12
8
51
1.69
64980--65018
6
6.7
6
88
11
55
82
0
2
15
0.79
70394--70488
47
2.0
47
95
0
172
28
23
6
42
1.78
79238--79344
52
2.1
52
96
0
196
28
18
12
41
1.86
102571--102604
16
2.1
16
88
5
50
67
0
2
29
1.05
102572--102604
17
1.9
18
88
11
52
69
0
3
27
1.03
112026--112085
23
2.5
25
86
5
79
33
6
6
53
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112032--112089
25
2.5
23
86
8
73
34
8
5
51
1.55
114421--114449
12
2.3
13
94
5
51
82
3
0
13
0.79
129557--129585
2
14.5
2
100
0
58
0
51
0
48
1.00
135149--135191
6
7.2
6
100
0
86
48
18
16
16
1.81
140405--140453
23
2.1
23
84
3
62
8
22
0
69
1.14
140873--140944
33
2.1
35
85
10
96
43
2
2
51
1.30
142102--142135
10
3.4
10
92
8
52
70
0
0
29
0.87
142984--143227
121
2.0
120
92
0
407
51
2
9
35
1.50
145549--145843
41
7.0
41
74
6
207
31
20
28
20
1.97
145760--145832
24
3.0
24
95
0
128
28
20
27
23
1.99
147181--147261
42
1.9
43
92
7
139
62
1
0
35
1.03
147182--147258
28
2.7
29
84
8
86
62
1
0
36
1.04
147322--147598
41
6.8
41
89
1
405
28
22
32
15
1.95
147358--147431
24
3.4
24
63
24
63
27
24
33
14
1.94
150455--150502
26
1.9
24
83
8
60
29
20
0
50
1.49
152396--152455
17
3.4
17
68
17
50
60
6
0
33
1.23
152398--152457
19
3.3
19
69
9
61
63
6
0
30
1.20
153116--153162
21
2.2
21
100
0
94
4
10
12
72
1.25
153123--153168
21
2.2
21
92
0
74
8
10
10
69
1.37
155178--155533
43
8.3
43
86
2
459
23
18
28
29
1.98
155178--155533
129
2.8
128
89
3
511
23
18
28
29
1.98
155692--155737
22
2.0
23
91
4
76
60
0
0
39
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
155697--155791
29
3.3
29
82
8
113
56
2
0
41
1.11
155715--155763
15
3.3
15
71
23
50
51
2
0
46
1.12
156151--156200
21
2.4
21
96
0
91
10
48
8
34
1.66
156346--156389
18
2.5
17
82
10
52
22
2
9
65
1.32
157644--157690
24
2.0
23
84
12
60
61
2
17
19
1.44
177993--178295
151
2.0
151
85
4
414
27
16
13
42
1.86
189288--189375
11
8.6
11
64
25
50
65
11
3
19
1.38
189286--189328
18
2.4
18
85
14
54
65
9
2
23
1.34
192119--192174
26
2.2
26
96
0
103
30
5
3
60
1.36
195228--195261
17
1.9
18
88
5
52
20
23
2
52
1.60
203754--203874
57
2.1
57
80
8
131
42
4
10
42
1.61
215486--215530
19
2.3
20
81
11
58
37
26
8
26
1.86
219737--219783
2
23.5
2
100
0
94
51
0
0
48
1.00

Tables:   1

The End!