Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013985.1 Kokia drynarioides strain JFW-HI SEQ_129016, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  121132

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1647--1730
34
2.4
35
96
2
152
59
7
25
8
1.52
2665--2713
24
2.0
26
84
15
68
46
0
22
30
1.52
2784--2899
47
2.5
47
97
0
214
11
25
25
37
1.89
2784--2910
22
5.3
25
87
9
185
12
27
23
36
1.91
2869--2924
25
2.2
26
84
6
71
14
28
17
39
1.89
3834--3881
15
3.1
16
76
11
55
64
0
0
35
0.94
3544--4023
241
2.0
240
89
1
728
45
8
9
35
1.69
5148--5188
22
1.9
21
85
5
55
36
24
0
39
1.56
10530--10554
3
8.3
3
100
0
50
0
0
32
68
0.90
16181--16206
11
2.4
11
100
0
52
92
0
7
0
0.39
20853--20885
2
17.0
2
93
6
59
51
0
0
48
1.00
23196--23220
6
4.2
6
100
0
50
36
16
0
48
1.46
36554--36608
28
2.0
27
82
3
65
50
0
3
45
1.19
37770--37812
11
3.9
11
88
8
61
65
25
2
6
1.30
38207--38233
2
13.5
2
100
0
54
51
0
0
48
1.00
38391--38426
8
4.5
8
85
0
54
83
0
2
13
0.76
38387--38426
16
2.6
16
88
4
64
80
0
2
17
0.83
39108--39169
27
2.2
27
80
5
70
41
3
3
51
1.34
39377--39406
15
2.0
15
93
0
51
53
3
0
43
1.17
44694--44752
28
2.0
30
87
9
86
69
0
5
25
1.09
54697--54763
29
2.3
30
84
2
82
31
20
20
26
1.98
60754--60784
6
5.2
6
92
0
53
51
0
32
16
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62994--63053
31
2.0
31
86
3
86
36
5
25
33
1.78
69931--69966
2
18.0
2
100
0
72
50
0
0
50
1.00
70590--70628
17
2.3
17
90
0
60
56
5
2
35
1.35
72054--72106
13
4.1
13
77
0
52
37
22
7
32
1.82
76623--76694
10
7.1
10
73
13
58
65
2
4
27
1.25
81222--81309
44
2.0
44
100
0
176
34
11
20
34
1.88
88344--88392
23
2.1
23
100
0
98
57
4
18
20
1.57
95763--95789
2
13.5
2
100
0
54
51
0
48
0
1.00
101313--101339
2
13.5
2
100
0
54
51
0
0
48
1.00
105440--105478
20
1.9
20
85
15
53
56
17
15
10
1.66
109415--109453
19
2.2
18
86
9
53
30
25
33
10
1.89
113053--113117
28
2.3
28
84
5
78
33
1
7
56
1.37
114400--114446
13
3.5
13
80
11
51
31
0
0
68
0.90

Tables:   1

The End!