Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013986.1 Kokia drynarioides strain JFW-HI SEQ_129017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  184687

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11694--11797
29
3.4
30
79
12
120
37
5
1
54
1.35
11697--11796
34
3.2
33
85
9
129
36
6
2
56
1.36
17574--17607
5
7.0
5
90
3
52
79
0
20
0
0.73
26441--26638
98
2.0
98
100
0
396
37
22
15
24
1.92
43476--43536
30
2.0
30
100
0
122
42
16
9
31
1.81
47364--47414
3
17.0
3
91
0
75
0
27
33
39
1.57
56144--56218
19
3.8
18
72
19
60
20
16
0
64
1.30
56158--56207
24
2.1
24
84
0
64
18
16
0
66
1.26
58265--58298
14
2.4
14
85
0
50
23
0
5
70
1.09
58953--59005
23
2.3
22
83
6
61
15
11
13
60
1.59
59319--59413
47
2.0
47
100
0
190
25
6
16
51
1.68
60095--60327
72
3.2
72
96
0
430
41
10
25
22
1.85
65769--65802
11
3.2
11
87
4
52
0
23
0
76
0.79
67205--67267
24
2.6
25
80
11
62
53
15
4
25
1.61
69065--69093
3
10.0
3
92
7
51
68
0
0
31
0.89
69122--69185
29
2.2
29
97
0
119
51
6
18
23
1.69
71824--71865
17
2.5
17
84
3
50
59
0
0
40
0.97
72294--72327
17
2.0
17
94
0
59
44
0
2
52
1.16
78153--78219
27
2.5
26
78
7
80
25
37
20
16
1.93
94636--94673
18
2.2
17
86
9
51
28
7
10
52
1.64
99869--99993
23
5.3
23
73
15
71
12
24
22
41
1.87
103182--103240
30
2.0
30
96
0
109
25
3
11
59
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103288--103338
25
2.1
24
85
10
68
33
1
7
56
1.39
103349--103394
23
2.0
23
83
8
58
58
0
0
41
0.98
103991--104031
21
2.0
21
85
9
57
53
2
0
43
1.13
104926--104968
18
2.4
19
80
11
54
48
0
2
48
1.14
109604--109648
22
2.0
22
91
0
72
28
11
28
31
1.91
130531--131250
241
3.0
241
97
0
1350
37
18
17
26
1.93
138711--138735
11
2.3
11
100
0
50
92
0
0
8
0.40
138709--138746
19
2.0
20
89
5
60
84
5
0
10
0.77
140344--140389
24
1.9
24
86
8
67
36
0
0
63
0.95
146054--146084
15
2.1
15
93
0
53
58
0
0
41
0.98
148089--148134
21
2.2
21
88
3
67
71
0
0
28
0.86
155724--155770
23
2.0
23
100
0
94
36
4
12
46
1.62
157009--157259
125
2.0
125
92
1
414
32
12
19
35
1.90
163074--163115
21
2.0
21
95
4
77
45
4
16
33
1.69
171070--171111
3
14.0
3
94
0
75
35
0
30
33
1.58
178563--178588
3
8.7
3
100
0
52
69
0
30
0
0.89
182281--182325
20
2.2
20
88
7
65
37
0
6
55
1.26

Tables:   1

The End!