Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001399.1 Kokia drynarioides strain JFW-HI SEQ_112887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65319

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
905--951
17
2.8
17
86
0
67
57
2
2
38
1.23
1400--1439
18
2.3
17
86
4
53
35
2
5
57
1.34
5311--5361
25
2.0
25
100
0
102
45
19
7
27
1.78
13787--13840
22
2.5
22
72
6
56
61
0
3
35
1.14
14692--14768
31
2.5
31
81
8
79
53
7
11
27
1.64
14703--14761
30
1.9
31
89
3
93
54
8
15
22
1.68
27878--27915
20
1.9
20
89
10
60
60
2
0
36
1.11
29607--29683
22
3.6
21
72
6
73
12
11
14
61
1.58
29865--29900
14
2.6
14
86
0
54
77
0
0
22
0.76
32850--32926
23
3.3
23
90
0
118
9
23
22
45
1.80
32933--32985
23
2.3
23
93
3
90
13
22
28
35
1.92
41095--41124
16
1.9
16
93
6
53
70
0
30
0
0.88
43500--43528
15
1.9
15
100
0
58
37
20
13
27
1.91
43605--43639
17
2.0
18
88
5
54
65
0
0
34
0.93
43571--43673
42
2.5
42
75
9
99
57
0
6
34
1.32
46376--46407
3
10.7
3
100
0
64
65
0
34
0
0.93
63308--63348
18
2.3
18
87
4
57
26
0
2
70
0.99
65185--65263
36
2.2
36
81
4
88
17
6
45
30
1.73

Tables:   1

The End!