Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014000.1 Kokia drynarioides strain JFW-HI SEQ_129031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23283

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2116--2167
3
17.3
3
100
0
104
65
0
0
34
0.93
2166--2202
3
13.0
3
88
11
60
32
0
0
67
0.91
2907--2949
15
2.9
15
82
10
52
25
4
44
25
1.73
2896--3131
93
2.5
93
95
0
409
26
5
38
30
1.78
3000--3042
15
2.9
15
82
10
52
25
4
44
25
1.73
3016--3304
123
2.5
107
75
18
328
25
5
39
29
1.78
3109--3164
15
3.7
15
83
9
78
28
1
50
19
1.58
3103--3165
30
2.1
30
100
0
126
25
4
47
22
1.70
3001--3269
123
2.2
123
95
0
484
25
5
40
28
1.77
3223--3273
15
3.4
15
78
10
68
23
5
43
27
1.77
3634--3685
23
2.3
23
83
3
70
57
3
0
38
1.17
4567--4624
26
2.3
26
84
3
73
51
12
8
27
1.68
5480--5706
9
24.2
9
67
18
90
62
1
3
31
1.22
5501--5568
26
2.5
28
75
18
70
64
0
1
33
1.02
5602--5635
17
2.1
16
88
5
50
67
0
2
29
1.05
5526--5671
19
7.8
18
65
17
57
63
2
3
31
1.23
5605--5682
19
4.1
19
68
12
61
66
1
5
26
1.20
5619--5702
38
2.2
38
83
8
100
65
1
4
28
1.20
8020--8111
9
9.8
9
70
17
62
32
2
2
63
1.19
8020--8088
27
2.5
27
83
9
77
28
2
2
65
1.22
8028--8111
19
4.4
18
77
5
69
33
1
2
63
1.15
9219--9249
15
2.1
15
100
0
62
48
0
6
45
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18039--18080
2
21.5
2
95
4
77
50
0
0
50
1.00

Tables:   1

The End!