Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014003.1 Kokia drynarioides strain JFW-HI SEQ_129034, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80950

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5602--5655
23
2.3
23
87
0
72
42
20
22
14
1.88
8320--8398
40
2.0
39
82
2
95
29
29
15
26
1.96
8501--9357
210
4.1
209
86
3
1119
36
18
21
22
1.95
9693--9788
6
16.7
6
71
12
76
43
1
2
53
1.19
9693--9772
34
2.4
34
85
4
108
43
1
2
52
1.22
9693--9788
17
5.6
17
80
6
95
43
1
2
53
1.19
10417--10462
3
15.7
3
81
4
58
30
6
0
63
1.20
11689--11991
30
10.2
28
77
9
178
35
25
1
36
1.67
11689--12012
29
11.0
29
78
6
285
35
24
2
37
1.68
11689--11957
59
4.6
56
82
7
196
34
25
2
37
1.69
22034--22270
114
2.1
114
95
0
429
24
20
24
30
1.98
22756--22803
21
2.3
20
79
10
51
41
8
4
45
1.53
31162--32035
247
3.6
247
95
1
1553
36
10
6
47
1.63
33235--33261
6
4.5
6
100
0
54
0
33
29
37
1.58
40386--40423
20
1.9
20
88
0
58
42
18
10
28
1.83
42312--42779
233
2.0
234
91
2
769
31
19
19
30
1.96
55019--55052
17
2.0
17
94
0
59
11
8
17
61
1.54
62920--62971
28
1.9
27
88
7
79
38
9
3
48
1.54
74245--74404
80
2.0
80
100
0
320
40
11
26
22
1.87

Tables:   1

The End!