Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014018.1 Kokia drynarioides strain JFW-HI SEQ_129049, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  178492

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3051--3090
20
2.0
20
85
9
55
32
0
12
55
1.38
11360--13114
587
3.0
587
92
1
2908
38
21
12
27
1.90
19230--19578
23
15.3
23
86
2
490
33
6
14
46
1.69
19648--19759
36
3.1
35
88
1
152
27
11
25
35
1.90
19658--19756
36
2.8
36
92
1
155
27
13
23
36
1.92
22551--22782
40
5.8
40
83
4
245
28
22
16
31
1.96
22545--22782
80
3.0
80
83
3
275
28
23
17
31
1.97
25481--25530
24
2.1
24
88
0
73
60
4
8
28
1.43
25812--25837
13
2.0
13
100
0
52
53
7
23
15
1.67
25852--25881
14
2.1
15
93
6
53
76
3
6
13
1.11
29478--29507
14
2.1
15
93
6
53
76
3
6
13
1.11
40317--40373
23
2.4
24
82
5
62
8
12
7
71
1.29
51599--51747
79
1.9
80
84
4
203
23
16
24
34
1.95
51590--51762
79
2.2
78
77
6
186
22
17
26
32
1.96
52444--52481
18
2.1
18
85
9
51
34
0
13
52
1.40
54687--54733
24
2.0
24
83
8
60
70
2
10
17
1.26
61877--61910
18
1.9
17
94
5
59
17
17
0
64
1.29
62448--62483
18
2.1
18
89
5
56
33
25
0
41
1.55
70434--70489
22
2.5
22
83
11
62
55
1
1
41
1.21
74575--74611
19
1.9
19
88
0
56
67
2
5
24
1.25
81991--82042
21
2.5
21
81
12
54
67
3
1
26
1.18
83439--83464
3
8.7
3
100
0
52
30
0
0
69
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
87307--87533
117
2.0
113
92
6
381
37
11
7
44
1.68
88308--88337
11
2.7
11
94
0
51
30
0
0
70
0.88
89542--89583
2
21.0
2
100
0
84
50
0
0
50
1.00
92297--92331
18
1.9
18
88
0
52
57
14
0
28
1.38
113054--113105
24
2.1
25
89
10
81
67
13
5
13
1.40
117873--117924
25
2.1
25
100
0
104
50
3
21
25
1.65
125516--125588
37
2.0
37
100
0
146
30
24
8
36
1.85
131475--131513
14
2.8
14
88
0
60
33
25
7
33
1.84
132655--132684
15
2.0
15
93
0
51
83
16
0
0
0.65
132663--132692
12
2.4
13
94
5
53
83
13
0
3
0.77
134641--134672
13
2.6
12
90
9
55
90
0
9
0
0.45
135954--136078
62
2.0
62
88
0
187
30
20
14
35
1.92
138231--138266
2
18.5
2
94
5
65
0
47
0
52
1.00
146636--146673
20
1.9
20
89
10
60
44
10
0
44
1.38
148279--148332
17
3.4
16
70
19
51
37
22
1
38
1.65
148276--148335
30
2.0
30
96
0
111
36
23
1
38
1.65
149073--149339
134
2.0
134
98
0
516
31
21
11
35
1.89
154448--154477
12
2.6
11
94
5
51
43
0
13
43
1.43
158341--158415
24
3.1
24
90
0
114
54
6
10
28
1.60
160334--160384
24
2.1
24
96
0
93
56
5
11
25
1.57
168257--168295
13
2.8
13
88
7
51
38
2
10
48
1.51

Tables:   1

The End!