Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014029.1 Kokia drynarioides strain JFW-HI SEQ_129060, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  171400

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4005--4039
6
6.0
6
86
6
54
34
0
28
37
1.58
8806--9037
29
8.0
28
73
14
116
35
2
23
37
1.69
8906--9046
29
4.8
29
84
6
153
36
1
20
41
1.61
9292--9330
20
2.0
19
85
5
51
58
5
0
35
1.20
10030--10092
29
2.1
30
85
8
85
60
3
1
34
1.22
10030--10104
29
2.6
27
81
12
78
61
2
1
34
1.18
13339--13388
18
2.9
18
76
5
50
16
0
6
78
0.95
13363--13439
35
2.2
35
81
2
93
31
3
2
62
1.27
13419--13572
78
2.0
77
89
3
238
47
3
3
45
1.37
13435--13598
78
2.1
77
84
3
211
48
2
3
45
1.33
13970--14013
22
2.0
21
91
4
70
40
0
2
56
1.11
13970--14010
21
2.0
20
90
9
64
39
0
2
58
1.11
14858--14909
20
2.5
21
71
6
52
38
1
1
57
1.21
16022--16059
7
5.3
7
96
3
67
0
13
55
31
1.38
23065--23094
2
15.0
2
92
0
51
50
3
0
46
1.18
25874--25936
20
2.9
22
81
6
67
57
3
0
39
1.15
29913--29988
32
2.4
30
82
8
80
51
2
15
30
1.57
30240--30295
29
1.9
29
96
0
103
42
7
7
42
1.59
32258--32305
13
3.8
13
77
22
57
68
4
0
27
1.07
33209--33421
102
2.1
102
83
1
266
33
18
21
26
1.96
34842--35009
58
2.9
56
86
3
212
30
12
15
41
1.84
39543--39584
15
2.7
15
85
10
50
33
2
0
64
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46407--46476
32
2.2
32
87
5
97
37
5
7
50
1.54
47679--47708
2
15.0
2
92
0
51
50
3
0
46
1.18
56528--56606
39
2.0
39
100
0
158
31
15
32
20
1.93
56615--56648
12
2.8
12
86
0
50
23
8
11
55
1.63
65964--66237
141
1.9
141
82
2
345
25
18
17
37
1.93
67710--67737
3
9.3
3
100
0
56
32
0
0
67
0.91
68931--68959
10
3.0
10
95
5
51
0
10
0
89
0.48
76407--76450
23
2.0
23
90
4
72
40
6
4
47
1.50
78544--78795
132
1.9
134
82
5
323
50
22
9
17
1.74
81348--81398
14
3.6
14
74
12
50
35
1
1
60
1.19
85688--85761
22
3.1
24
71
21
75
24
9
10
55
1.64
97241--97267
3
9.0
3
100
0
54
0
0
33
66
0.92
103960--103992
7
4.7
7
96
0
57
12
39
15
33
1.84
104295--104321
7
3.9
7
100
0
54
14
11
29
44
1.80
108544--108826
139
2.0
140
94
0
496
39
11
10
37
1.77
110764--111167
200
2.0
203
93
1
688
29
17
19
33
1.95
111523--112152
322
2.0
313
92
3
1046
29
19
20
30
1.97
123242--123281
19
2.1
19
85
4
53
47
0
5
47
1.24
125195--125245
23
2.3
23
86
10
70
39
5
3
50
1.45
125785--125827
18
2.4
18
80
7
52
51
0
2
46
1.13
140068--140197
59
2.2
60
86
4
174
36
10
16
35
1.84
145584--145687
52
2.0
52
100
0
208
48
13
17
21
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151178--151219
21
2.0
21
85
0
57
71
2
0
26
0.98
152977--153053
28
2.6
28
93
6
127
57
5
14
23
1.57
158005--158066
32
1.9
32
83
0
79
29
9
22
38
1.86
158400--158433
17
2.0
17
88
0
50
14
17
8
58
1.61
164611--164676
31
2.2
30
83
2
78
51
4
0
43
1.22

Tables:   1

The End!