Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014039.1 Kokia drynarioides strain JFW-HI SEQ_129070, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50039

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--42
2
21.0
2
100
0
84
50
0
0
50
1.00
891--921
15
2.1
15
100
0
62
25
22
0
51
1.48
782--1093
123
2.7
119
90
7
475
29
16
8
44
1.78
2651--2832
63
2.9
65
86
11
245
56
2
0
41
1.16
2795--2835
17
2.3
18
87
4
57
75
0
2
21
0.92
3484--3817
39
8.4
39
71
7
206
26
17
22
33
1.96
3523--3857
80
4.2
80
89
1
501
25
16
23
34
1.95
3524--3857
161
2.1
159
88
1
497
26
16
23
34
1.95
3924--4102
50
3.6
50
75
11
152
23
20
17
38
1.93
5004--5046
12
3.3
13
81
12
52
0
23
0
76
0.78
5001--5055
28
2.0
27
86
10
76
0
25
0
74
0.82
5002--5078
20
3.9
20
80
11
70
2
18
1
77
0.95
5001--5074
27
2.7
29
81
8
75
2
20
1
75
1.00
5009--5055
8
6.4
8
75
24
50
0
23
0
76
0.78
5044--5085
19
2.2
19
86
4
57
11
7
4
76
1.15
5945--5974
11
2.7
11
94
0
51
0
13
0
86
0.57
10086--10260
71
2.4
73
85
8
225
58
2
0
37
1.17
10063--10234
63
2.7
61
79
14
179
52
2
0
44
1.15
10213--10250
3
12.3
3
84
15
51
68
2
0
28
1.03
13918--13979
28
2.2
28
91
0
97
27
9
27
35
1.88
14004--14151
28
5.1
28
68
15
79
34
6
22
35
1.81
14079--14386
59
5.3
58
77
6
182
34
2
26
37
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14161--14428
59
4.6
58
80
6
236
34
2
27
34
1.71
14161--14378
88
2.5
88
89
2
312
35
2
27
34
1.70
14220--14428
29
7.1
29
79
3
213
34
2
28
33
1.72
14166--14429
29
9.0
28
74
11
190
35
2
26
35
1.71
15474--15518
9
4.9
9
89
5
54
35
4
0
60
1.17
15486--15521
3
12.0
3
93
0
63
33
2
0
63
1.08
16265--16322
17
3.4
17
78
4
71
53
5
3
37
1.40
16276--16342
18
3.8
17
75
7
62
58
5
2
32
1.38
16700--17707
206
4.9
206
86
1
1318
22
21
19
36
1.95
17792--18078
78
3.7
79
86
4
395
25
19
29
25
1.98
17792--18083
39
7.5
38
68
7
167
24
19
29
26
1.98
18157--18331
51
3.5
51
70
9
142
31
16
17
34
1.92
18145--18343
101
2.0
101
88
0
299
31
17
16
35
1.91
18432--18996
100
5.7
100
81
6
499
18
25
18
38
1.93
18539--19014
100
4.8
100
83
2
539
17
25
18
38
1.93
20205--20252
17
2.7
16
79
20
51
2
12
6
79
1.01
20222--20285
12
5.4
12
71
17
53
1
21
3
73
1.06
20225--20273
18
2.7
19
78
12
50
2
22
4
71
1.13
25117--25178
29
2.1
30
79
8
74
25
9
29
35
1.88
25252--25731
29
16.5
29
76
10
327
31
2
27
37
1.72
25259--25731
59
8.1
59
79
12
344
30
2
28
38
1.72
26412--26469
17
3.4
17
78
4
71
53
5
3
37
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26419--26466
18
2.8
17
81
6
60
56
4
4
35
1.38
27045--27159
30
4.0
29
70
15
94
61
4
5
28
1.37
30192--30316
30
4.2
30
87
5
173
44
24
12
19
1.84
34469--35411
473
2.0
478
90
3
1486
39
11
11
38
1.78
38593--38669
36
2.1
36
87
0
109
59
6
3
29
1.40
45938--45983
22
2.1
22
100
0
92
54
8
4
32
1.51
49507--49545
4
9.8
4
83
10
53
76
0
23
0
0.78
49507--49547
21
2.0
20
90
4
64
75
0
24
0
0.80
49503--49587
25
3.6
25
76
13
74
65
1
31
1
1.07

Tables:   1

The End!