Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014043.1 Kokia drynarioides strain JFW-HI SEQ_129074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92634

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44--82
4
9.5
4
88
5
60
0
23
0
76
0.78
51--96
21
2.2
21
84
7
58
2
23
0
73
0.94
3717--3762
19
2.4
18
82
13
56
39
0
4
56
1.19
6719--6758
21
2.1
19
86
13
55
40
15
10
35
1.80
6860--6915
20
2.8
19
82
17
78
50
0
0
50
1.00
7988--8023
15
2.4
15
90
9
56
36
0
0
63
0.94
7989--8023
16
2.2
15
90
10
52
34
0
0
65
0.93
10773--10799
6
4.5
6
100
0
54
33
0
14
51
1.43
16607--16721
59
2.0
60
86
6
164
42
18
17
21
1.89
32658--32699
17
2.5
17
85
11
52
50
2
0
47
1.14
32658--32699
18
2.4
18
81
14
52
50
2
0
47
1.14
35530--35651
23
5.4
22
79
8
113
14
22
23
38
1.92
37133--37182
18
2.8
18
81
6
57
28
16
16
40
1.89
49440--49466
2
13.5
2
100
0
54
51
0
0
48
1.00
53655--53733
28
2.7
30
88
9
126
50
1
0
48
1.08
61009--61724
356
2.0
356
97
0
1360
28
11
32
27
1.92
64216--64404
80
2.4
80
87
1
263
35
24
16
22
1.94
66752--66820
29
2.3
31
87
5
97
46
14
8
30
1.75
73119--73199
23
3.5
23
77
5
83
39
14
12
33
1.84
80197--80276
32
2.5
33
82
10
103
18
20
20
41
1.91
81985--82024
2
20.0
2
100
0
80
50
0
0
50
1.00
86404--86436
14
2.4
14
100
0
66
51
12
0
36
1.39

Tables:   1

The End!