Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014054.1 Kokia drynarioides strain JFW-HI SEQ_129085, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  125993

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181--237
27
2.1
27
100
0
114
14
31
21
33
1.92
6613--6637
3
8.3
3
100
0
50
32
0
32
36
1.58
9759--9828
29
2.5
26
76
14
68
48
1
0
50
1.09
9777--9826
13
3.2
16
75
18
61
54
0
0
46
1.00
9769--9826
29
2.0
30
86
3
82
51
1
0
46
1.11
9872--9908
19
1.9
19
88
0
56
48
2
0
48
1.15
11288--11339
19
2.9
17
75
13
59
61
7
0
30
1.24
18730--18758
5
5.8
5
100
0
58
0
17
0
82
0.66
24077--24111
18
1.9
18
94
0
61
60
0
0
40
0.97
33172--33203
14
2.4
13
94
5
55
87
0
12
0
0.54
39378--39439
31
2.0
31
100
0
124
58
19
3
19
1.53
42398--42438
18
2.3
18
87
4
57
34
7
4
53
1.50
47056--48203
574
2.0
574
97
0
2152
31
19
24
23
1.98
65236--65265
10
3.0
10
90
0
51
33
30
0
36
1.58
66250--66316
22
3.1
22
78
4
82
47
8
20
22
1.78
66248--66319
21
3.4
21
80
3
90
47
11
19
22
1.80
66982--67018
3
12.3
3
100
0
74
67
0
0
32
0.91
71603--71658
27
2.1
27
100
0
112
44
23
7
25
1.78
72510--72535
5
5.2
5
100
0
52
61
0
0
38
0.96
76732--76790
21
2.8
20
82
7
73
28
5
1
64
1.24
76743--76789
21
2.2
21
92
0
76
23
6
0
70
1.10
82440--82488
21
2.3
21
82
3
53
38
8
0
53
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84733--84768
18
2.0
18
94
0
63
16
13
13
55
1.69
89002--89029
12
2.3
12
100
0
56
21
50
10
17
1.77
103875--103914
14
3.1
14
73
26
52
82
0
17
0
0.67
103865--103927
24
2.7
23
87
7
90
80
1
17
0
0.78
103865--103925
8
7.6
8
80
7
70
83
1
14
0
0.72
103884--103925
17
2.6
16
85
10
59
83
0
16
0
0.65
105254--105294
20
2.0
20
86
9
57
29
21
12
36
1.90
106485--106512
14
2.0
14
100
0
56
35
14
7
42
1.73
106341--106618
154
1.8
154
91
1
459
33
7
14
44
1.72
106538--106582
23
1.9
24
86
13
67
33
4
6
55
1.46
122448--122563
29
4.2
29
64
22
79
47
3
0
49
1.18
122440--122600
80
2.0
81
98
1
315
45
3
0
50
1.19

Tables:   1

The End!