Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014055.1 Kokia drynarioides strain JFW-HI SEQ_129086, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56256

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16666--16796
43
3.1
43
84
2
158
35
11
26
26
1.91
16696--16852
41
3.7
42
81
6
149
38
8
27
25
1.84
17346--17421
21
3.8
21
73
16
79
23
18
19
38
1.93
17367--17426
18
3.2
18
70
21
59
25
16
20
38
1.93
17346--17426
39
2.1
39
100
0
162
23
18
19
38
1.93
20933--20984
26
2.0
26
85
7
70
44
7
3
44
1.51
25185--25251
33
2.0
33
91
0
107
31
0
17
50
1.47
25702--25760
21
2.9
19
80
12
55
28
1
6
62
1.30
27379--27474
32
3.0
32
95
0
174
39
15
18
26
1.91
27867--27899
16
2.1
17
88
11
52
57
0
0
42
0.98
30492--30549
28
2.1
28
90
0
89
37
1
5
55
1.33
30526--30559
17
2.0
17
94
0
59
44
0
0
55
0.99
30497--30559
28
2.3
27
83
8
81
41
1
3
53
1.26
32375--32547
29
6.0
28
77
11
140
37
27
2
32
1.69
32350--32582
29
8.0
29
72
12
133
37
26
3
33
1.72
32381--32566
58
3.2
56
76
11
178
37
26
3
33
1.73
34668--34942
90
3.1
89
83
1
309
34
13
25
27
1.93
37791--37816
6
4.3
6
100
0
52
15
30
34
19
1.93
38391--38416
2
13.0
2
100
0
52
0
50
0
50
1.00
40077--40103
14
1.9
14
100
0
54
51
37
0
11
1.37
40061--40100
20
2.0
20
85
0
53
50
35
2
12
1.54
41223--41262
3
14.0
3
89
10
66
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46741--46786
20
2.3
20
92
0
74
45
39
4
10
1.59
46794--46823
11
2.7
11
89
0
51
20
30
26
23
1.98
46820--46857
19
2.0
20
89
5
60
21
18
21
39
1.93
46815--46891
33
2.3
34
84
6
95
18
23
23
35
1.96
46853--46894
20
2.1
20
90
0
66
14
23
21
40
1.90
47940--47976
3
13.0
3
88
11
60
32
0
0
67
0.91
51965--52030
4
16.2
4
78
9
62
66
0
31
1
1.01
51966--52017
21
2.5
21
81
6
61
69
0
30
0
0.89
51965--52025
25
2.5
25
78
2
70
67
0
32
0
0.91
51969--52030
13
4.6
15
77
18
57
66
0
32
1
1.02
52083--52109
14
1.9
14
100
0
54
25
0
0
74
0.83

Tables:   1

The End!