Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014076.1 Kokia drynarioides strain JFW-HI SEQ_129107, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30195

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
379--449
15
4.7
15
80
0
88
15
12
26
45
1.82
482--554
17
4.4
16
86
8
94
53
4
0
42
1.20
499--549
6
8.8
6
77
16
54
54
3
0
41
1.19
497--567
17
4.3
17
87
5
92
54
7
0
38
1.27
1010--1602
139
4.3
139
87
2
788
21
23
17
37
1.94
12786--13033
29
8.4
28
73
15
173
29
4
34
31
1.77
12771--12996
59
3.8
57
84
8
249
30
4
33
30
1.79
12858--13025
89
1.9
90
88
3
259
30
2
33
33
1.73
12771--13033
59
4.5
56
81
11
235
30
4
33
31
1.78
12830--13034
30
7.0
30
76
12
176
28
3
35
32
1.74
14797--14867
15
4.7
15
87
0
106
16
11
26
45
1.82
14900--14961
17
3.8
15
80
16
61
51
4
0
43
1.23
15139--15220
30
2.6
32
75
21
84
45
1
2
51
1.22
15165--15209
24
1.9
23
86
4
63
46
2
0
51
1.13
19086--19202
35
3.6
35
69
25
103
34
15
21
29
1.94
19037--19229
60
3.3
58
87
7
254
31
15
23
29
1.95
19119--19165
25
1.9
25
91
4
78
27
19
19
34
1.96
19185--19221
19
2.0
19
94
5
67
21
16
21
40
1.91
19549--19615
28
2.4
27
80
7
89
46
0
0
53
1.00
22410--22460
22
2.2
25
82
10
63
21
9
21
47
1.79
26868--26976
26
4.3
26
65
17
66
46
22
7
22
1.76

Tables:   1

The End!