Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014078.1 Kokia drynarioides strain JFW-HI SEQ_129109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33199

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1055--1166
17
6.3
18
78
14
85
52
2
3
41
1.33
1069--1175
11
9.3
11
70
12
56
55
2
2
39
1.29
1072--1166
6
16.0
6
70
14
72
53
2
3
41
1.28
1068--1166
37
2.8
35
81
11
105
54
3
3
39
1.31
6775--6815
5
7.8
5
84
10
55
73
0
4
21
1.02
10339--10476
69
2.0
69
100
0
276
34
24
10
30
1.89
12158--12189
14
2.4
13
90
10
55
71
0
3
25
1.00
12193--12222
13
2.2
14
94
5
53
83
0
0
16
0.65
17460--17485
12
2.2
12
100
0
52
7
7
0
84
0.77
18312--18341
16
1.9
16
93
6
53
70
0
0
30
0.88
18369--18402
17
1.9
18
88
5
52
67
5
0
26
1.13
22996--23144
29
5.1
28
77
14
135
31
0
28
38
1.62
22996--23543
30
18.6
29
70
15
204
34
4
24
36
1.75
22996--23144
28
5.1
30
76
14
125
31
0
28
38
1.62
22996--23249
58
4.3
60
78
12
219
35
2
25
37
1.69
23116--23316
58
3.5
57
77
14
166
39
5
21
33
1.76
25125--25167
18
2.4
17
88
7
59
55
4
0
39
1.20
25670--26506
39
21.5
38
73
9
413
25
19
29
24
1.99
25611--26312
78
9.0
78
77
4
506
25
19
29
25
1.99
25639--26506
117
7.4
116
73
9
541
25
19
29
25
1.98

Tables:   1

The End!