Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014080.1 Kokia drynarioides strain JFW-HI SEQ_129111, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  124702

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3798--3838
21
2.0
21
85
4
57
36
2
9
51
1.48
8899--9125
99
2.3
99
96
0
409
47
13
12
26
1.78
22322--22396
10
7.5
10
71
16
66
34
26
24
14
1.94
22318--22396
20
4.0
20
81
6
106
35
26
24
13
1.93
22325--22401
40
1.9
40
89
0
118
35
24
23
16
1.95
23952--24005
19
2.8
19
91
0
81
57
7
31
3
1.44
24972--25012
6
6.8
6
91
0
64
56
0
26
17
1.41
24967--25012
12
3.8
12
91
2
74
58
0
23
17
1.38
24967--25012
18
2.5
18
85
3
65
58
0
23
17
1.38
28806--28936
23
5.8
23
78
7
99
37
24
23
14
1.92
28815--28885
21
3.3
20
81
11
79
33
25
25
15
1.95
28898--28948
23
2.2
23
92
0
84
45
23
15
15
1.85
29011--29058
24
1.9
26
84
16
66
31
22
0
45
1.53
34451--34476
8
3.2
8
100
0
52
11
23
11
53
1.69
39266--39355
41
2.2
40
79
11
94
55
4
1
38
1.27
47002--47079
21
3.7
21
65
11
52
29
21
14
34
1.93
47735--47881
42
3.5
42
83
0
168
26
25
10
37
1.88
50980--51091
25
4.4
25
90
3
163
21
19
26
32
1.97
63115--63164
21
2.4
21
86
0
64
42
20
16
22
1.89
69275--69400
63
2.0
63
96
0
234
27
24
16
30
1.97
69826--70193
60
6.2
59
75
9
277
39
15
16
29
1.89
69842--70199
120
3.0
119
80
3
382
37
14
16
32
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80967--81013
16
2.9
16
74
20
53
61
0
21
17
1.34
103114--103145
9
3.6
9
95
0
55
46
9
0
43
1.35
104685--104731
16
3.1
15
79
11
51
46
0
2
51
1.13
106070--106250
23
7.8
23
80
10
117
39
24
24
11
1.88
106096--106152
22
2.6
22
88
5
80
35
29
22
12
1.91
106163--106261
23
4.3
23
91
5
139
41
22
26
10
1.85
106325--106372
24
1.9
26
84
16
66
31
22
0
45
1.53
108669--108699
2
15.5
2
100
0
62
51
0
0
48
1.00
108924--108986
35
1.9
35
81
12
80
57
0
4
38
1.20
109938--109968
15
2.1
15
93
0
53
38
6
0
54
1.26
109938--109972
16
2.2
16
90
10
54
42
5
0
51
1.25
112424--112471
25
1.9
25
95
0
87
37
12
4
45
1.61
112431--112473
12
3.5
12
75
6
50
46
9
2
41
1.48
113712--113745
17
2.1
16
88
5
50
32
0
0
67
0.91
116398--116914
267
1.9
266
88
3
781
28
15
13
42
1.85
123061--123105
20
2.3
20
84
3
56
48
13
11
26
1.75

Tables:   1

The End!