Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014084.1 Kokia drynarioides strain JFW-HI SEQ_129115, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  123658

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--48
13
2.6
13
90
0
50
61
14
5
17
1.52
682--753
9
8.0
9
71
17
51
44
1
4
50
1.30
682--805
12
10.6
12
75
11
78
50
3
3
42
1.34
684--736
27
2.1
26
86
10
74
45
1
3
49
1.31
741--805
3
21.7
3
74
0
58
58
4
1
35
1.28
741--813
24
3.0
24
85
0
92
56
5
2
35
1.37
762--813
12
4.3
12
92
0
86
55
5
1
36
1.35
1867--2127
29
8.8
29
73
15
196
35
28
4
31
1.76
1866--2127
117
2.2
119
87
4
370
35
28
4
31
1.76
1866--2191
59
5.5
59
84
5
353
34
29
5
30
1.80
1876--2191
117
2.7
116
83
7
331
34
29
5
31
1.79
2453--2645
97
2.0
96
82
7
230
29
19
14
36
1.91
13493--13550
27
2.1
28
93
3
100
17
18
8
55
1.67
14055--14815
203
3.7
204
87
4
1047
37
21
21
19
1.94
15233--15317
6
14.2
6
73
9
75
40
2
1
56
1.20
15233--15314
17
4.6
18
82
11
105
39
2
1
57
1.20
15233--15314
37
2.3
35
89
8
121
39
2
1
57
1.20
15340--15373
13
2.6
13
90
0
50
61
14
5
17
1.52
18028--18071
16
2.8
16
82
6
54
40
11
9
38
1.73
20192--20244
21
2.6
20
88
11
81
52
0
18
28
1.46
30113--30156
21
2.0
22
82
4
54
6
9
6
77
1.13
31019--31048
13
2.2
14
94
5
53
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32090--32133
22
2.0
21
86
4
61
31
2
2
63
1.19
32472--32518
20
2.3
20
96
0
85
44
38
0
17
1.48
32488--32538
21
2.5
21
83
3
59
47
29
1
21
1.62
32553--32606
20
2.7
20
80
11
65
44
40
0
14
1.46
35800--35838
19
2.0
20
85
5
53
2
25
12
58
1.47
37784--37857
24
3.1
24
90
0
121
25
9
6
58
1.54
40052--40276
52
4.3
52
88
2
310
25
13
24
35
1.93
42008--42082
24
3.1
24
88
0
114
25
10
6
57
1.57
45993--46152
80
2.0
80
95
2
286
34
8
13
43
1.74
48372--48410
21
1.9
20
84
5
51
17
0
33
48
1.48
48343--49040
348
2.0
348
94
0
1207
25
18
25
31
1.97
59418--59467
15
3.4
15
86
2
75
56
0
12
32
1.36
59772--59802
2
15.5
2
100
0
62
48
0
0
51
1.00
73019--73104
44
2.0
43
93
2
145
29
11
10
48
1.72
76977--77076
50
2.0
50
100
0
200
38
10
18
34
1.84
78083--78162
31
2.5
32
95
2
144
52
18
2
26
1.58
89380--89429
16
3.0
16
76
5
55
68
8
0
24
1.16
90077--90138
22
2.8
22
72
0
61
64
4
9
20
1.42
91651--91699
22
2.1
24
85
11
66
53
0
0
46
1.00
92369--92405
19
1.9
19
88
0
56
21
2
10
64
1.37
93227--93272
20
2.3
20
84
0
56
47
8
6
36
1.60
94460--94519
3
20.0
3
79
6
68
60
1
3
35
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95657--95980
29
11.2
28
77
10
235
35
27
4
33
1.76
95737--95980
57
4.2
58
80
9
223
35
29
4
31
1.76
101342--101380
2
20.5
2
89
10
64
48
0
0
51
1.00
102922--102952
16
1.9
16
93
0
53
61
3
29
6
1.37
103000--103109
29
4.1
27
78
17
122
48
0
0
50
1.07
102999--103122
51
2.5
49
89
7
187
49
0
0
49
1.12
103071--103112
20
2.0
22
90
9
70
52
0
0
47
1.00
103040--103122
20
4.2
20
70
23
68
49
1
1
48
1.16
114274--114306
2
16.5
2
93
0
57
48
0
3
48
1.17
114908--114994
23
3.7
23
93
3
138
51
10
13
24
1.72
116922--116984
24
2.6
24
87
0
90
50
9
14
25
1.72
121494--121523
12
2.5
12
100
0
60
6
20
16
56
1.62
123157--123216
15
4.0
15
78
8
77
8
11
16
63
1.51

Tables:   1

The End!