Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014090.1 Kokia drynarioides strain JFW-HI SEQ_129121, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  181580

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6717--6759
17
2.6
17
81
3
52
51
2
0
46
1.13
6706--6906
62
3.2
60
73
17
167
53
4
1
40
1.32
6801--6909
20
5.9
18
69
18
64
52
4
1
41
1.33
8656--8724
33
2.1
32
86
7
95
39
18
2
39
1.66
9199--9304
29
3.7
28
72
6
79
23
16
6
53
1.66
9791--10072
110
2.6
110
84
2
343
29
20
17
33
1.95
11662--11779
56
2.1
55
83
12
150
47
6
18
27
1.74
11765--11790
13
2.0
13
100
0
52
69
0
15
15
1.20
14857--14895
3
13.3
3
89
5
62
66
0
2
30
1.05
15697--15721
13
1.9
13
100
0
50
56
4
0
40
1.18
15717--15780
30
2.1
30
88
0
92
34
0
23
42
1.55
26079--26282
104
2.0
104
95
0
363
36
22
11
29
1.89
38079--38440
182
2.0
182
95
0
643
39
18
14
27
1.90
51931--51987
26
2.2
26
80
0
69
43
21
7
28
1.78
51950--52027
26
3.0
26
78
0
84
43
21
12
21
1.86
55685--55713
12
2.3
13
94
5
51
34
3
10
51
1.53
66230--66265
18
2.1
17
94
5
63
80
0
19
0
0.71
69617--69654
20
2.0
19
85
10
51
50
10
7
31
1.66
81908--82450
271
2.0
271
93
0
917
34
23
12
29
1.91
86328--86370
22
1.9
23
85
4
61
37
6
6
48
1.57
93478--93535
26
2.2
26
78
6
64
31
22
17
29
1.96
94601--94655
17
3.2
17
81
0
65
47
10
18
23
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94606--94671
34
1.9
34
84
0
87
46
12
18
22
1.81
94773--94844
35
2.1
35
100
0
144
2
34
11
51
1.52
129837--129882
18
2.6
18
86
6
58
43
17
15
23
1.87
131885--131987
51
2.0
50
94
3
188
24
28
15
31
1.95
136489--136528
17
2.4
17
83
8
55
20
12
10
57
1.63
147493--147537
17
2.8
16
81
18
58
0
22
0
77
0.76
147493--147537
10
4.2
11
86
8
58
0
22
0
77
0.76
148057--148116
17
3.5
18
80
14
65
53
16
13
16
1.73
148075--148127
17
3.1
17
88
0
70
56
15
11
16
1.67
148104--148145
21
2.1
21
86
8
61
54
14
11
19
1.70
173568--173615
18
2.7
18
93
0
87
12
20
27
39
1.89
176174--176231
26
2.2
26
81
0
62
32
20
18
27
1.97
178905--178970
28
2.4
27
80
11
73
9
18
6
66
1.40

Tables:   1

The End!