Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014095.1 Kokia drynarioides strain JFW-HI SEQ_129126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80830

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1955--1982
2
14.0
2
100
0
56
0
50
0
50
1.00
13610--13664
27
2.0
27
100
0
110
38
14
14
32
1.87
37191--37233
22
2.0
22
90
0
68
34
13
0
51
1.42
37277--37368
25
3.6
25
73
11
96
54
2
25
18
1.55
37270--37373
52
2.0
52
98
0
199
50
1
27
20
1.59
44777--44840
30
2.2
28
83
5
83
51
0
3
45
1.17
44776--44853
30
2.8
26
78
14
77
52
0
2
44
1.14
44837--44888
20
2.5
21
81
6
70
53
5
0
40
1.25
46030--46071
20
2.1
20
90
0
66
35
30
21
11
1.90
47481--47511
3
10.3
3
92
0
53
32
35
0
32
1.58
56477--56520
22
2.0
21
86
4
61
36
0
0
63
0.95
57407--57440
17
2.0
17
94
0
59
44
0
2
52
1.16
57922--57981
33
1.9
32
87
12
90
53
0
3
43
1.17
58641--58670
14
2.1
14
100
0
60
13
26
30
30
1.94
60534--60566
17
1.9
17
88
11
50
57
3
3
36
1.29
63330--63385
26
2.1
27
90
6
89
19
19
3
57
1.56
66328--66379
21
2.5
21
76
17
56
38
1
1
57
1.21
73326--73352
5
5.4
5
100
0
54
0
62
0
37
0.95

Tables:   1

The End!