Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014105.1 Kokia drynarioides strain JFW-HI SEQ_129136, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29096

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3248--3820
312
1.8
321
81
6
729
36
16
11
35
1.85
4673--4704
12
2.8
11
95
4
55
37
0
0
62
0.95
4653--4721
29
2.4
28
88
7
95
42
0
1
56
1.08
4683--4722
17
2.3
18
86
4
55
45
0
0
55
0.99
6745--7066
29
11.1
28
71
15
167
34
25
2
36
1.71
6788--7066
58
4.8
57
79
11
243
34
23
2
39
1.70
6817--7125
58
5.3
58
79
10
251
33
24
3
39
1.72
7043--7187
60
2.4
60
82
6
161
30
28
5
35
1.80
6774--7185
29
14.1
29
67
18
121
33
25
3
37
1.74
7108--7201
29
3.2
29
76
8
100
36
26
5
31
1.79
6846--7239
58
6.7
59
73
11
188
32
24
4
38
1.75
18626--18660
18
1.9
18
94
0
61
20
11
11
57
1.64
19090--19455
49
7.4
48
71
13
221
40
17
25
16
1.90
19090--19512
99
4.3
100
86
4
535
39
18
24
17
1.91
19903--19944
17
2.6
16
88
3
66
40
0
4
54
1.21
19903--19950
17
2.9
16
84
6
51
41
0
4
54
1.20
19936--19996
17
3.6
16
84
4
68
42
0
3
54
1.17
20891--20956
3
21.0
3
72
9
51
56
1
1
40
1.18
20888--20956
12
5.8
12
77
13
61
55
1
1
42
1.18
22055--22596
59
9.2
58
76
10
365
34
24
2
38
1.70
22055--22381
29
11.2
29
69
11
193
35
24
1
38
1.64
22519--22648
28
4.5
28
81
5
143
30
27
7
33
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22578--22665
28
3.1
28
88
0
86
31
26
12
29
1.93
25191--25249
29
2.0
31
83
6
77
59
13
1
25
1.44

Tables:   1

The End!