Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014126.1 Kokia drynarioides strain JFW-HI SEQ_129159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89174

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
871--997
23
5.4
23
81
5
103
11
21
21
46
1.81
892--995
46
2.2
46
82
3
127
11
20
22
46
1.82
895--1043
69
2.1
71
84
13
202
12
21
20
46
1.82
1978--2005
8
3.5
8
100
0
56
78
0
0
21
0.75
8412--8484
31
2.4
31
78
13
80
41
10
5
42
1.63
12102--12289
94
2.0
94
100
0
376
20
22
15
41
1.90
12763--12805
20
2.2
20
86
0
59
34
6
6
51
1.56
16329--16497
82
2.0
84
95
4
306
33
19
21
25
1.97
38214--38248
17
2.1
17
88
0
52
51
0
0
48
1.00
41056--41109
19
2.8
18
81
13
63
25
7
1
64
1.30
41076--41139
29
2.2
29
80
5
76
23
6
1
68
1.21
41156--41291
9
14.3
9
68
19
55
32
5
0
61
1.25
41161--41276
10
11.8
10
68
13
62
35
5
0
58
1.26
41125--41196
20
3.7
19
75
5
63
33
5
1
59
1.29
41142--41266
30
4.2
29
73
12
103
38
5
0
56
1.23
46140--46240
50
2.0
50
98
0
193
38
20
12
27
1.90
49938--50228
145
2.0
145
93
0
501
41
6
17
34
1.75
50323--50365
19
2.3
19
79
0
50
53
0
11
34
1.37
52765--52790
3
8.7
3
100
0
52
0
65
0
34
0.93
59651--59700
25
2.0
25
84
7
66
56
0
0
44
0.99
69382--70182
400
2.0
401
96
0
1478
32
19
20
28
1.97
71236--71304
25
2.7
25
78
14
79
40
0
0
59
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74872--74924
9
5.7
9
81
16
63
33
0
1
64
1.05
78077--78138
23
2.7
23
89
0
97
14
30
16
38
1.88
78077--78198
23
5.2
23
80
11
65
13
28
18
39
1.88
78099--78201
23
4.4
23
76
11
93
11
28
20
39
1.87
79089--79241
71
2.2
70
90
6
242
56
3
0
38
1.22
79600--79643
23
1.9
23
85
0
61
52
0
6
40
1.28
83468--83494
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!