Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014142.1 Kokia drynarioides strain JFW-HI SEQ_129175, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  139558

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1017--1064
22
2.2
22
82
14
55
52
35
4
8
1.51
4486--4545
31
1.9
31
83
6
77
51
3
3
41
1.35
6673--6893
59
3.7
59
84
5
259
31
19
14
35
1.91
10695--10745
17
3.1
16
88
2
66
47
0
5
47
1.26
10702--10745
17
2.6
17
92
3
72
47
0
6
45
1.29
10840--11097
83
3.1
82
83
5
297
43
6
4
44
1.50
11873--11983
30
3.7
29
81
4
114
27
9
3
60
1.44
12786--13012
116
2.0
114
80
7
253
44
13
13
27
1.82
41585--41643
31
1.9
31
82
6
75
37
0
1
61
1.07
46732--46764
16
2.1
16
100
0
66
27
6
12
54
1.60
47218--47263
15
3.1
15
76
17
51
43
2
0
54
1.12
68810--68855
2
22.0
2
91
8
74
47
0
4
47
1.21
83255--83353
52
1.9
52
91
0
162
46
0
6
47
1.27
83312--83358
18
2.8
17
78
9
53
48
0
2
48
1.13
92127--92177
25
2.0
25
100
0
102
25
11
11
50
1.72
101187--101260
32
2.4
30
81
4
85
40
0
5
54
1.24
101975--102017
19
2.3
19
95
0
77
51
9
11
27
1.69
102788--102853
20
3.2
20
85
12
82
60
4
0
34
1.17
102798--102854
19
2.9
19
89
7
80
57
5
0
36
1.21
114900--114933
15
2.2
16
89
5
52
70
2
2
23
1.15
118388--118417
8
3.8
8
100
0
60
60
0
0
40
0.97
130821--130872
24
2.2
23
80
6
59
32
3
1
61
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130887--130926
20
2.0
20
85
5
53
30
2
5
62
1.29
134197--134435
108
2.2
106
83
5
293
30
16
13
39
1.87
134338--134586
123
2.0
120
85
6
331
28
16
14
40
1.88
134337--134586
61
4.1
61
83
7
303
28
16
14
40
1.88
134338--134619
62
4.6
59
82
6
184
28
14
15
41
1.87
134586--134695
54
2.0
54
96
0
202
30
10
13
46
1.76
136201--136619
58
7.0
61
75
11
299
37
15
16
30
1.90
136201--136410
62
3.4
60
83
5
260
38
16
16
28
1.90
136204--136619
122
3.5
119
79
9
372
37
15
16
30
1.90
136209--136535
59
5.4
58
76
9
216
37
16
14
30
1.89
136327--136615
117
2.4
115
82
5
301
37
15
15
31
1.89

Tables:   1

The End!