Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014145.1 Kokia drynarioides strain JFW-HI SEQ_129178, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  260204

Tables:   1   

This is table  1  of  1  ( 58 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7110--7169
12
4.8
12
76
8
57
50
1
11
36
1.49
7122--7171
26
1.9
26
91
0
82
50
2
12
36
1.51
7750--7810
18
3.3
19
73
13
65
60
1
4
32
1.28
20576--20603
1
28.0
1
100
0
56
100
0
0
0
0.00
23777--23806
9
3.4
9
90
9
53
0
10
0
90
0.47
26304--26328
2
12.5
2
100
0
50
48
0
0
52
1.00
26329--26386
29
2.0
28
83
3
71
36
0
0
63
0.94
42520--42595
39
1.9
39
86
5
109
23
27
15
32
1.95
57083--57115
9
3.6
9
95
4
57
90
0
0
9
0.44
57083--57115
10
3.4
10
91
8
59
90
0
0
9
0.44
67229--67566
168
2.0
169
98
1
660
28
21
12
36
1.90
71984--72023
20
2.0
21
95
5
73
45
0
5
50
1.23
72028--72058
15
2.1
15
93
0
53
35
6
9
48
1.62
74174--74286
18
6.4
17
71
21
63
33
2
4
59
1.31
74125--74260
53
2.6
52
85
5
184
34
2
3
58
1.30
74177--74324
71
2.1
70
87
6
210
35
3
3
58
1.32
80847--80901
21
2.7
20
75
8
56
52
3
5
38
1.42
80912--81000
25
3.3
27
81
12
121
44
2
2
50
1.26
84153--84204
21
2.4
21
81
15
70
50
17
11
21
1.77
84224--84307
22
3.8
22
90
3
132
40
25
21
13
1.89
86115--86155
18
2.4
16
84
15
55
46
2
0
51
1.14
94374--94447
19
3.8
19
73
7
60
64
1
2
31
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103142--103178
19
1.9
19
88
0
56
45
16
2
35
1.61
103341--103375
18
1.9
18
94
0
61
25
0
8
65
1.21
113826--113999
23
7.5
23
77
10
149
43
19
24
12
1.85
113826--113975
69
2.1
67
84
13
189
44
19
23
12
1.85
115899--115945
24
2.0
24
82
0
58
21
17
14
46
1.83
116027--116114
23
3.8
23
80
4
79
27
13
19
39
1.89
118015--118082
22
2.9
23
73
20
61
51
1
4
42
1.31
118039--118085
20
2.2
22
85
7
62
53
0
6
40
1.27
126282--126310
2
14.5
2
100
0
58
48
0
0
51
1.00
131454--131488
3
11.7
3
100
0
70
68
0
0
31
0.90
139465--139513
21
2.4
21
80
6
57
61
0
0
38
0.96
148248--148277
11
2.7
11
94
0
51
23
0
76
0
0.78
157095--157214
41
2.9
41
97
0
231
29
17
12
40
1.86
159905--159956
25
2.0
26
85
10
72
32
1
5
59
1.32
163903--163937
15
2.4
15
90
4
54
17
11
0
71
1.14
165769--165835
31
2.2
31
94
0
116
38
13
17
29
1.88
171789--171831
9
5.0
9
77
11
54
60
0
2
37
1.10
171789--171832
16
2.6
17
85
10
63
61
0
2
36
1.09
177233--177257
2
12.5
2
100
0
50
52
0
48
0
1.00
183025--183060
14
2.7
13
87
8
54
33
5
0
61
1.19
183946--183991
16
2.9
16
87
9
67
45
0
0
54
0.99
185715--185744
3
10.0
3
100
0
60
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189334--189468
40
3.4
38
73
12
96
30
28
20
21
1.98
189366--189469
37
2.7
38
76
5
93
31
26
19
22
1.97
203441--203486
15
3.1
14
84
6
56
54
0
2
43
1.12
205150--205211
15
4.1
15
82
2
70
32
17
0
50
1.47
206955--206985
7
4.4
7
91
0
53
16
35
0
48
1.46
210653--210697
2
22.5
2
100
0
90
48
0
0
51
1.00
222774--222812
17
2.4
17
91
4
62
56
10
0
33
1.33
226353--226398
23
2.0
23
95
0
83
8
23
21
45
1.80
226407--226453
23
2.1
23
88
4
69
14
17
27
40
1.89
231379--231537
79
2.0
79
98
0
309
29
30
15
23
1.96
234150--234190
6
6.8
6
94
0
64
2
9
51
36
1.48
237189--237215
12
2.2
12
100
0
54
44
7
25
22
1.79
246425--246451
8
3.4
8
100
0
54
77
11
0
11
0.99
246417--246451
16
2.2
16
89
0
52
82
8
0
8
0.83

Tables:   1

The End!