Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014153.1 Kokia drynarioides strain JFW-HI SEQ_129186, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52941

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2688--2879
96
2.0
96
82
8
230
35
13
20
29
1.91
3168--3378
29
7.1
28
73
20
162
29
4
33
33
1.77
5378--5474
17
5.6
17
82
2
122
53
2
1
43
1.19
9529--9713
96
1.9
95
84
8
250
36
12
19
31
1.89
10004--10119
60
2.0
60
82
1
144
42
11
22
24
1.86
9967--10157
59
3.2
58
76
12
192
39
8
24
27
1.84
10063--10159
29
3.3
27
71
14
68
32
7
28
30
1.84
10140--10379
30
8.1
29
75
9
209
33
2
26
37
1.70
10113--10369
59
4.3
59
83
7
254
34
3
25
36
1.72
17911--17970
28
2.1
28
87
0
84
30
13
25
31
1.93
17929--18181
58
4.3
58
71
8
172
39
8
22
30
1.83
17987--18146
58
2.7
59
80
3
191
40
10
20
28
1.85
18143--18300
30
5.4
29
67
16
83
36
1
24
37
1.67
18138--18424
59
4.9
57
77
8
211
36
3
24
35
1.73
18104--18420
29
10.8
29
72
13
213
35
3
25
35
1.74
20302--20379
6
13.7
6
70
15
58
51
3
1
43
1.28
20302--20379
34
2.3
34
84
0
93
51
3
1
43
1.28
20302--20379
17
4.6
18
78
9
74
51
3
1
43
1.28
20619--20653
17
2.1
17
100
0
70
31
0
0
68
0.90
20804--20835
17
2.0
17
88
11
50
59
3
6
31
1.38
21049--21115
23
2.9
22
78
12
55
62
4
4
28
1.34
21085--21132
22
2.3
21
79
13
55
64
0
6
29
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21728--21796
21
3.1
21
75
10
59
13
21
10
55
1.67
26593--26633
18
2.3
18
86
0
55
39
24
9
26
1.86
33383--33408
8
3.2
8
100
0
52
76
0
11
11
1.01
35158--35190
15
2.2
15
94
0
57
9
15
0
75
1.03
36035--36139
6
17.5
6
68
14
56
70
0
3
25
1.04
36066--36115
22
2.3
21
80
10
57
70
0
8
22
1.13
39698--39730
15
2.2
15
94
0
57
9
15
0
75
1.03
40594--40698
6
17.5
6
68
14
56
70
0
3
25
1.04
40625--40674
22
2.3
21
80
10
57
70
0
8
22
1.13
49201--49229
13
2.1
14
93
6
51
82
0
3
13
0.79
52268--52320
18
2.9
18
85
2
70
1
62
0
35
1.06
52319--52361
18
2.4
18
88
0
59
9
13
6
69
1.35

Tables:   1

The End!