Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014171.1 Kokia drynarioides strain JFW-HI SEQ_129204, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96643

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3211--3358
73
2.0
73
97
0
278
42
13
8
35
1.75
9987--10016
4
7.5
4
100
0
60
0
26
0
73
0.84
9974--10025
12
4.3
12
82
0
50
0
32
0
67
0.91
11437--11461
3
8.3
3
100
0
50
68
0
32
0
0.90
12302--12379
23
3.4
23
85
0
102
8
24
17
48
1.76
12303--12388
23
3.8
23
83
3
68
9
26
16
47
1.76
13703--13750
21
2.3
21
86
10
71
31
0
4
64
1.12
14071--14116
20
2.2
21
84
3
58
60
6
8
23
1.49
14080--14123
21
2.2
20
87
4
61
54
6
6
31
1.53
16367--16414
24
1.9
26
84
16
66
31
22
0
45
1.53
17905--17982
23
3.4
23
85
0
102
8
24
17
48
1.76
17906--17991
23
3.8
23
83
3
68
9
26
16
47
1.76
19306--19353
21
2.3
21
86
10
71
31
0
4
64
1.12
19674--19719
20
2.2
21
84
3
58
60
6
8
23
1.49
19683--19726
21
2.2
20
87
4
61
54
6
6
31
1.53
21970--22017
24
1.9
26
84
16
66
31
22
0
45
1.53
28820--28875
21
2.5
24
75
19
66
35
1
1
60
1.17
28831--28881
21
2.6
19
85
14
68
39
1
0
58
1.09
29700--29728
10
2.7
11
89
10
51
55
20
6
17
1.65
36901--36957
28
2.0
28
86
3
78
42
1
12
43
1.52
40927--40960
15
2.2
16
94
5
61
58
0
2
38
1.13
42599--42836
30
8.0
30
84
4
250
37
1
24
35
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42575--42839
30
8.9
29
83
5
228
38
1
25
34
1.67
44800--44942
42
3.4
41
81
8
162
27
12
30
29
1.93
45279--45967
49
14.1
49
74
7
531
19
25
17
37
1.93
45261--45854
98
6.1
98
85
2
667
19
25
17
37
1.93
47823--47855
14
2.4
14
90
10
50
0
24
0
75
0.80
52347--52499
58
2.6
58
81
5
166
39
5
20
33
1.77
52453--52656
30
6.9
29
75
12
148
35
3
24
35
1.74
52484--52655
30
5.7
30
79
10
156
35
3
25
35
1.73
52480--52654
60
3.0
60
85
8
225
34
3
26
34
1.74
54372--54448
17
4.5
17
81
0
91
57
7
1
33
1.36
54362--54448
34
2.6
34
83
0
102
55
6
1
36
1.34
58670--58703
15
2.3
15
89
0
50
35
52
8
2
1.47
61217--61278
24
2.5
24
82
12
74
58
0
6
35
1.24
63112--63230
6
20.3
6
73
14
106
43
4
1
50
1.31
63126--63200
23
3.2
23
96
1
132
44
2
2
50
1.30
63112--63200
17
5.4
16
75
20
71
41
3
2
52
1.30
64727--64872
58
2.5
59
84
6
190
52
2
1
43
1.24
68629--68841
29
7.3
29
73
12
186
30
24
2
42
1.67
68619--68929
59
5.3
58
83
5
333
32
24
2
40
1.70
68648--68869
29
7.6
28
71
15
98
31
23
2
42
1.66
68620--68990
59
6.3
59
79
10
243
31
25
3
40
1.72
68673--68990
29
10.9
29
67
19
94
30
25
3
39
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74232--74877
235
2.7
238
95
1
1149
45
7
8
39
1.62
74679--75072
198
2.0
198
96
1
727
46
7
7
37
1.62
75292--75359
35
1.9
36
87
3
102
55
5
32
5
1.48
82361--82399
6
6.5
6
100
0
78
48
17
17
15
1.81
82726--82757
17
1.9
16
93
6
55
53
3
0
43
1.16
91809--91840
6
5.3
6
92
0
55
18
65
15
0
1.27
93820--93850
15
2.1
14
94
5
53
51
32
6
9
1.60

Tables:   1

The End!