Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014172.1 Kokia drynarioides strain JFW-HI SEQ_129205, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53254

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1240--1332
43
2.2
43
94
0
159
25
2
26
45
1.65
1241--1309
22
3.2
22
68
12
61
28
1
24
44
1.62
1264--1330
21
3.1
21
72
10
73
20
2
28
47
1.65
22220--22254
18
1.9
18
94
0
61
60
5
20
14
1.54
23201--23232
15
2.1
15
100
0
64
46
18
15
18
1.84
25067--25098
15
2.1
15
94
0
55
53
0
0
46
1.00
28898--28969
32
2.4
31
84
11
87
22
1
26
50
1.58
28898--29153
29
8.4
30
65
20
104
22
1
28
47
1.60
28934--28992
23
2.5
24
86
5
77
25
1
22
50
1.58
28967--29119
63
2.4
63
94
0
270
20
0
30
49
1.49
30045--30177
42
3.2
41
65
26
107
33
6
11
48
1.65
30044--30206
84
1.9
84
97
0
308
33
6
12
47
1.67
30128--30263
57
2.4
57
96
0
245
36
4
11
47
1.60
30961--31030
18
3.7
18
70
10
59
18
1
52
27
1.54
30955--31041
39
2.2
39
85
0
111
20
2
50
26
1.60
30998--31296
54
5.1
63
84
8
193
21
2
48
28
1.63
31069--31301
54
4.3
54
89
0
304
21
3
47
27
1.65
34536--34931
161
2.5
161
86
2
537
36
20
11
31
1.87
36662--36702
21
1.9
21
85
5
55
29
7
19
43
1.78
36670--36710
22
1.9
21
85
5
55
34
7
14
43
1.73
36774--36822
22
2.2
22
88
0
71
59
16
8
16
1.60
37310--37349
18
2.2
19
86
4
55
30
2
2
65
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39971--40127
30
5.4
29
74
9
97
38
3
24
33
1.72
40067--40130
27
2.3
28
81
8
76
39
1
21
37
1.63
41786--41831
6
7.7
6
87
7
67
50
0
2
47
1.13
41788--41820
17
1.9
17
100
0
66
57
0
0
42
0.98
44213--44306
42
2.2
43
92
1
154
26
30
18
24
1.97
45924--45986
19
3.3
19
72
18
58
25
0
4
69
1.07
48064--48107
22
2.0
23
90
4
72
50
15
11
22
1.76
48784--49001
41
5.3
41
86
2
321
16
31
20
32
1.95

Tables:   1

The End!