Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014179.1 Kokia drynarioides strain JFW-HI SEQ_129212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29306

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--38
3
12.7
3
100
0
76
31
0
0
68
0.90
10160--10209
24
2.1
23
85
3
64
46
4
10
40
1.56
10196--10270
24
3.1
25
75
11
77
56
1
5
37
1.31
11285--11392
29
3.7
29
91
5
164
35
27
2
34
1.72
11494--11556
28
2.2
28
85
2
81
36
30
7
25
1.84
13779--13839
29
2.1
29
100
0
122
26
29
9
34
1.88
23209--23810
205
3.0
203
89
1
913
36
21
21
20
1.95
24180--24257
11
6.9
11
76
16
79
41
1
1
56
1.15
24187--24267
6
14.0
6
75
17
73
44
2
1
51
1.22
24180--24267
17
5.1
17
84
4
106
44
2
1
52
1.21
24960--25009
24
2.1
23
85
3
64
46
4
10
40
1.56
26022--26181
29
5.5
28
82
9
180
37
28
1
31
1.68
26022--26224
58
3.5
58
84
7
232
37
29
1
31
1.67
26022--26220
30
6.7
30
81
11
200
37
28
1
32
1.66
26022--26316
58
5.0
59
77
8
193
35
28
3
32
1.74
26206--26308
29
3.6
30
70
7
88
32
26
6
34
1.83
27790--27923
29
4.6
28
75
10
90
35
2
24
37
1.71
27789--27915
58
2.2
58
81
1
137
36
3
25
35
1.72
27811--27945
29
4.6
28
82
7
153
35
2
25
36
1.69
27811--27945
58
2.3
59
85
2
173
35
2
25
36
1.69

Tables:   1

The End!