Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014187.1 Kokia drynarioides strain JFW-HI SEQ_129220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  150406

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11767--11852
41
2.1
41
93
0
145
37
10
13
38
1.80
16199--16271
31
2.4
30
80
8
85
36
10
9
42
1.73
17964--18081
58
2.0
60
86
5
168
31
16
5
47
1.68
18327--18453
31
4.3
30
74
12
109
53
10
8
27
1.64
38203--38243
20
2.0
20
85
0
55
39
0
4
56
1.21
41355--41491
9
15.9
9
81
8
151
44
34
21
0
1.52
41343--41488
24
5.8
24
82
9
148
45
34
20
0
1.52
41352--41492
3
47.0
3
84
0
129
43
34
21
0
1.53
42253--42291
13
2.9
13
82
17
53
17
23
5
53
1.63
43250--43290
9
4.6
9
81
0
55
46
34
17
2
1.61
47242--47272
9
3.4
9
95
0
53
0
3
48
48
1.17
47858--47962
30
3.3
30
71
21
81
41
2
1
53
1.26
47977--48008
16
1.9
17
93
6
57
62
0
0
37
0.95
49164--49214
24
2.1
24
81
3
57
52
0
0
47
1.00
52804--52902
49
2.0
49
98
0
189
34
14
16
35
1.88
61036--61079
22
2.0
22
86
8
63
29
4
6
59
1.44
61206--61230
12
2.1
12
100
0
50
60
0
0
40
0.97
88790--88823
2
17.0
2
93
0
59
0
47
0
52
1.00
88823--88856
2
17.0
2
87
0
50
50
44
2
2
1.32
96070--96098
2
14.5
2
100
0
58
51
48
0
0
1.00
111393--111740
30
11.8
30
78
9
338
30
4
29
35
1.77
111394--111742
60
5.9
60
85
3
413
30
4
29
35
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
111411--111742
119
2.8
118
84
3
418
30
4
29
35
1.77
113594--113663
6
12.0
6
79
11
74
51
1
1
45
1.18
113595--113674
12
7.0
12
74
13
71
55
1
1
42
1.16
113600--113670
17
4.1
17
83
1
88
53
1
1
43
1.18
113604--113663
23
2.6
23
82
15
79
55
1
1
41
1.20
113989--114444
205
2.3
200
86
2
635
21
21
20
36
1.95
124721--124759
12
3.2
13
85
7
55
76
0
7
15
0.99
124853--124908
29
2.0
29
85
3
78
30
7
28
33
1.84
124885--125268
30
13.0
29
78
8
339
33
2
29
35
1.69
124992--125268
59
4.7
59
89
4
387
31
2
29
36
1.71
127126--127199
6
13.0
6
72
16
50
58
1
1
39
1.15
127120--127199
12
7.0
12
71
13
62
56
1
1
41
1.15
127129--127195
11
5.9
11
74
19
57
56
1
1
40
1.17
127120--127195
17
4.4
17
85
5
89
53
1
1
43
1.17
127793--128184
195
2.0
196
94
1
698
44
13
6
35
1.71
128500--128525
12
2.2
12
100
0
52
42
15
7
34
1.75
128972--129423
225
2.0
224
99
0
886
43
14
16
25
1.87
134085--134139
19
2.8
20
71
15
53
60
3
0
36
1.15
146121--146181
30
2.0
33
84
12
85
44
0
3
52
1.17

Tables:   1

The End!