Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014193.1 Kokia drynarioides strain JFW-HI SEQ_129226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97071

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1881--1941
28
2.2
28
93
0
104
54
9
16
19
1.70
9829--9940
50
2.2
50
83
0
143
33
20
24
22
1.97
10016--10234
40
5.5
40
82
2
246
31
25
16
26
1.96
12010--12133
30
4.2
30
74
6
108
38
18
4
38
1.70
12327--12428
39
2.7
39
93
3
172
26
6
9
56
1.56
19326--19543
110
2.0
110
89
1
339
32
6
19
41
1.78
24785--24853
29
2.3
29
85
5
84
52
13
13
21
1.73
24981--25005
8
3.1
8
100
0
50
60
0
0
40
0.97
25070--25124
26
2.2
25
83
3
65
49
1
0
49
1.11
26331--26379
20
2.7
18
81
12
64
42
0
4
53
1.20
27122--27161
20
2.0
20
100
0
80
25
20
5
50
1.68
28543--28813
89
3.0
89
98
0
524
39
14
16
29
1.88
41942--41982
19
2.2
19
100
0
82
26
26
24
21
2.00
50424--50473
20
2.6
18
84
12
55
56
6
0
38
1.24
50483--50540
8
6.3
9
72
21
50
62
3
0
34
1.12
55163--55221
23
2.6
23
81
5
66
8
22
22
47
1.77
55542--55591
18
2.7
20
77
22
63
12
10
4
74
1.21
58267--58453
91
2.1
91
98
0
365
42
10
11
35
1.74
59818--59877
21
2.8
21
87
7
77
75
1
8
15
1.12
60521--60646
61
2.1
61
96
0
234
43
14
4
37
1.66
62231--62257
4
6.8
4
100
0
54
77
0
0
22
0.76
65005--65062
16
3.7
15
77
11
55
74
1
8
15
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65003--65062
22
2.8
22
85
7
70
75
1
8
15
1.12
65862--65904
19
2.3
19
84
8
52
58
4
0
37
1.19
74051--74159
20
5.4
20
70
10
71
51
11
6
31
1.62
79727--79863
51
2.7
51
87
0
193
35
14
21
28
1.93
80518--80569
21
2.5
21
93
0
95
25
9
26
38
1.86
84205--84977
123
6.4
122
77
8
679
23
24
15
35
1.94
84190--84960
239
3.2
239
87
3
976
23
24
16
35
1.94
96339--96580
52
4.7
52
92
0
385
29
14
21
33
1.93

Tables:   1

The End!