Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001420.1 Kokia drynarioides strain JFW-HI SEQ_112917, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98498

Tables:   1   

This is table  1  of  1  ( 64 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--36
2
16.5
2
100
0
66
51
0
0
48
1.00
763--813
15
3.3
16
79
15
54
56
3
0
39
1.18
1156--1209
27
2.0
27
96
0
99
51
9
14
24
1.71
3198--3242
24
1.9
23
86
4
63
33
2
0
64
1.06
6388--6429
23
1.9
23
85
9
61
42
7
0
50
1.30
6375--6432
20
2.8
21
72
15
57
48
5
0
46
1.24
7148--7193
16
3.1
16
75
18
53
50
0
0
50
1.00
7254--7313
15
3.7
15
73
16
57
50
1
3
45
1.28
7857--7881
13
1.9
13
100
0
50
8
8
8
76
1.18
10130--10216
6
14.8
6
68
17
58
40
2
2
55
1.25
10130--10205
17
4.2
17
77
11
71
39
2
2
55
1.28
11889--12215
29
11.2
28
80
8
323
35
27
2
34
1.71
11889--12337
58
7.7
58
78
8
376
34
28
3
33
1.74
11902--12243
146
2.3
146
85
5
451
35
28
3
33
1.73
12170--12337
59
2.9
58
77
7
169
33
28
4
33
1.76
11902--12337
29
15.0
27
73
15
286
35
28
3
33
1.73
15792--16351
58
9.6
59
76
9
359
35
4
25
34
1.76
15792--16346
115
4.8
116
77
10
426
35
4
25
34
1.76
15846--16347
29
17.3
29
69
15
240
35
3
25
35
1.74
17335--17364
14
2.1
14
93
0
51
16
6
20
56
1.62
17372--17427
6
9.7
6
72
27
50
53
1
0
44
1.11
17378--17430
17
3.1
17
81
10
72
54
1
0
43
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17365--17407
23
1.9
22
95
4
77
51
0
0
48
1.00
23694--23812
31
3.9
31
70
17
86
27
12
10
49
1.73
23892--23937
25
1.9
23
83
16
58
36
8
6
47
1.60
24053--24212
59
2.7
58
79
4
171
48
10
16
25
1.78
28269--28331
18
3.5
18
73
16
51
34
6
3
55
1.41
28298--28339
18
2.3
19
88
8
61
33
2
2
61
1.21
35592--35652
29
2.1
29
82
11
72
42
6
13
37
1.70
36542--36590
21
2.3
21
82
6
64
63
0
2
34
1.06
36557--36587
15
2.1
15
93
0
53
58
0
0
41
0.98
37760--37972
29
7.4
29
66
15
111
35
21
1
42
1.62
37760--37828
28
2.4
29
76
11
70
40
17
0
42
1.49
37644--38109
114
4.1
113
79
7
431
32
21
3
42
1.69
37817--38135
115
2.8
113
81
5
338
30
20
4
44
1.71
37644--38126
57
8.4
57
75
10
385
32
21
3
42
1.70
37809--38131
29
11.2
30
67
15
121
29
20
4
45
1.69
49229--49815
201
3.0
192
85
4
755
35
17
24
22
1.96
50127--50216
17
5.2
17
74
4
81
43
1
5
50
1.33
50173--50216
6
7.5
6
82
5
54
52
0
2
45
1.13
50142--50217
29
2.6
29
82
10
84
44
1
3
50
1.29
52154--52265
29
3.8
29
72
19
81
31
25
4
38
1.76
52098--52296
58
3.4
59
78
10
185
31
26
3
38
1.73
54711--54741
2
15.5
2
100
0
62
51
0
48
0
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55409--55438
15
1.9
16
93
6
53
63
0
0
36
0.95
60811--60859
23
2.0
23
88
7
71
59
2
10
28
1.41
63309--63337
14
2.1
14
93
6
51
41
0
13
44
1.44
66501--66577
23
3.5
21
78
14
84
7
2
19
70
1.24
66503--66605
46
2.3
44
80
6
116
7
3
17
70
1.26
66569--66682
12
9.8
12
70
15
80
7
3
19
69
1.28
66557--66682
24
5.5
23
74
11
89
7
3
18
70
1.25
66537--66683
56
2.6
56
82
5
165
7
3
19
70
1.26
66620--66663
23
1.9
23
85
0
61
9
2
18
70
1.24
66596--66696
44
2.2
45
81
11
109
7
1
20
69
1.24
66654--66696
20
2.1
21
91
4
70
6
0
23
69
1.12
66643--66697
21
2.5
22
82
14
69
7
0
21
70
1.11
70155--70184
16
1.9
16
93
6
53
33
3
13
50
1.58
72329--72393
31
2.1
31
82
0
76
46
6
6
41
1.54
73560--73598
6
6.3
6
88
5
60
64
0
0
35
0.94
78033--78095
20
3.0
20
73
13
56
53
7
0
38
1.30
85374--85401
12
2.3
12
100
0
56
53
10
21
14
1.70
87199--87232
15
2.2
16
89
5
52
32
2
0
64
1.08
88636--88669
16
2.1
17
88
5
52
50
0
5
44
1.26
89594--89638
21
2.1
22
83
4
56
60
8
0
31
1.28

Tables:   1

The End!